RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 ZNF354CQ86Y25 554 aa18.31■□□□□ 0.52
PNKP-225ENST00000636214 GATAD2AQ86YP4 633 aa18.31■□□□□ 0.52
PNKP-225ENST00000636214 PCDH20Q8N6Y1 951 aaKnown RBP18.31■□□□□ 0.52
PNKP-225ENST00000636214 OR2A12Q8NGT7 310 aa18.31■□□□□ 0.52
PNKP-225ENST00000636214 FAM172AQ8WUF8 416 aa18.31■□□□□ 0.52
PNKP-225ENST00000636214 TBC1D31Q96DN5 1066 aa18.31■□□□□ 0.52
PNKP-225ENST00000636214 RETREG1Q9H6L5 497 aa18.31■□□□□ 0.52
PNKP-225ENST00000636214 C2CD4BA6NLJ0 364 aa18.3■□□□□ 0.52
PNKP-225ENST00000636214 SMAD6O43541 496 aaKnown RBP18.3■□□□□ 0.52
PNKP-225ENST00000636214 PCDH8O95206 1070 aa18.3■□□□□ 0.52
PNKP-225ENST00000636214 CTSLP07711 333 aa18.3■□□□□ 0.52
PNKP-225ENST00000636214 UNGP13051 313 aaPredicted RBP18.3■□□□□ 0.52
PNKP-225ENST00000636214 GPD1P21695 349 aa18.3■□□□□ 0.52
PNKP-225ENST00000636214 GLDCP23378 1020 aa18.3■□□□□ 0.52
PNKP-225ENST00000636214 ADRA1BP35368 520 aa18.3■□□□□ 0.52
PNKP-225ENST00000636214 NRG1Q02297 640 aaPredicted RBP18.3■□□□□ 0.52
PNKP-225ENST00000636214 CLEC16AQ2KHT3 1053 aa18.3■□□□□ 0.52
PNKP-225ENST00000636214 NEK5Q6P3R8 708 aa18.3■□□□□ 0.52
PNKP-225ENST00000636214 DNAJC24Q6P3W2 148 aa18.3■□□□□ 0.52
PNKP-225ENST00000636214 ERN2Q76MJ5 926 aaKnown RBP18.3■□□□□ 0.52
PNKP-225ENST00000636214 RYBPQ8N488 228 aaPredicted RBP18.3■□□□□ 0.52
PNKP-225ENST00000636214 JOSD2Q8TAC2 188 aa18.3■□□□□ 0.52
PNKP-225ENST00000636214 ERGIC2Q96RQ1 377 aa18.3■□□□□ 0.52
PNKP-225ENST00000636214 OSBPL2Q9H1P3 480 aa18.3■□□□□ 0.52
PNKP-225ENST00000636214 ERVMER34-1Q9H9K5 563 aa18.3■□□□□ 0.52
PNKP-225ENST00000636214 DOCK9Q9BZ29 2069 aa18.3■□□□□ 0.52
PNKP-225ENST00000636214 ANKRD11Q6UB99 2663 aaPredicted RBP18.3■□□□□ 0.52
PNKP-225ENST00000636214 TRPM6Q9BX84 2022 aa18.29■□□□□ 0.52
PNKP-225ENST00000636214 SLC31A1O15431 190 aa18.29■□□□□ 0.52
PNKP-225ENST00000636214 LEFTY1O75610 366 aa18.29■□□□□ 0.52
PNKP-225ENST00000636214 PLEKP08567 350 aaPredicted RBP18.29■□□□□ 0.52
PNKP-225ENST00000636214 RHOQP17081 205 aa18.29■□□□□ 0.52
PNKP-225ENST00000636214 EPHA8P29322 1005 aaPredicted RBP18.29■□□□□ 0.52
PNKP-225ENST00000636214 AKT2P31751 481 aa18.29■□□□□ 0.52
PNKP-225ENST00000636214 NEK3P51956 506 aa18.29■□□□□ 0.52
PNKP-225ENST00000636214 GSCP56915 257 aaPredicted RBP18.29■□□□□ 0.52
PNKP-225ENST00000636214 POLD3Q15054 466 aaPredicted RBP18.29■□□□□ 0.52
PNKP-225ENST00000636214 ARSIQ5FYB1 569 aa18.29■□□□□ 0.52
PNKP-225ENST00000636214 EFHC2Q5JST6 749 aa18.29■□□□□ 0.52
PNKP-225ENST00000636214 PIP5KL1Q5T9C9 394 aa18.29■□□□□ 0.52
PNKP-225ENST00000636214 DPY19L3Q6ZPD9 716 aa18.29■□□□□ 0.52
PNKP-225ENST00000636214 HORMAD1Q86X24 394 aa18.29■□□□□ 0.52
PNKP-225ENST00000636214 PHF13Q86YI8 300 aaPredicted RBP18.29■□□□□ 0.52
PNKP-225ENST00000636214 AOPEPQ8N6M6 819 aa18.29■□□□□ 0.52
PNKP-225ENST00000636214 CHST14Q8NCH0 376 aa18.29■□□□□ 0.52
PNKP-225ENST00000636214 C3orf20Q8ND61 904 aa18.29■□□□□ 0.52
PNKP-225ENST00000636214 ARRDC3Q96B67 414 aa18.29■□□□□ 0.52
PNKP-225ENST00000636214 KLHDC7BQ96G42 594 aa18.29■□□□□ 0.52
PNKP-225ENST00000636214 CNDP2Q96KP4 475 aaKnown RBP18.29■□□□□ 0.52
PNKP-225ENST00000636214 AGPAT1Q99943 283 aa18.29■□□□□ 0.52
PNKP-225ENST00000636214 HEPHQ9BQS7 1158 aa18.29■□□□□ 0.52
PNKP-225ENST00000636214 DNAI1Q9UI46 699 aa18.29■□□□□ 0.52
PNKP-225ENST00000636214 CHD6Q8TD26 2715 aa18.29■□□□□ 0.52
PNKP-225ENST00000636214 CFAP47Q6ZTR5 3102 aa18.28■□□□□ 0.52
PNKP-225ENST00000636214 A0A1W2PQU0 124 aa18.28■□□□□ 0.52
PNKP-225ENST00000636214 WNT9AO14904 365 aa18.28■□□□□ 0.52
PNKP-225ENST00000636214 RAMP2O60895 175 aa18.28■□□□□ 0.52
PNKP-225ENST00000636214 GJB6O95452 261 aa18.28■□□□□ 0.52
PNKP-225ENST00000636214 LDOC1O95751 146 aaPredicted RBP18.28■□□□□ 0.52
PNKP-225ENST00000636214 FERP16591 822 aa18.28■□□□□ 0.52
PNKP-225ENST00000636214 TYRO3Q06418 890 aa18.28■□□□□ 0.52
PNKP-225ENST00000636214 C1QBPQ07021 282 aaKnown RBP18.28■□□□□ 0.52
PNKP-225ENST00000636214 SCAPQ12770 1279 aa18.28■□□□□ 0.52
PNKP-225ENST00000636214 HS1BP3Q53T59 392 aa18.28■□□□□ 0.52
PNKP-225ENST00000636214 CARD16Q5EG05 197 aa18.28■□□□□ 0.52
PNKP-225ENST00000636214 PPP1R2P3Q6NXS1 205 aa18.28■□□□□ 0.52
PNKP-225ENST00000636214 SCYL2Q6P3W7 929 aa18.28■□□□□ 0.52
PNKP-225ENST00000636214 FBXL19Q6PCT2 694 aa18.28■□□□□ 0.52
PNKP-225ENST00000636214 DCUN1D2Q6PH85 259 aa18.28■□□□□ 0.52
PNKP-225ENST00000636214 CCNI2Q6ZMN8 369 aaPredicted RBP18.28■□□□□ 0.52
PNKP-225ENST00000636214 SLFN11Q7Z7L1 901 aa18.28■□□□□ 0.52
PNKP-225ENST00000636214 SAP25Q8TEE9 199 aa18.28■□□□□ 0.52
PNKP-225ENST00000636214 PCDHB18PQ96TA0 734 aa18.28■□□□□ 0.52
PNKP-225ENST00000636214 MYOCQ99972 504 aa18.28■□□□□ 0.52
PNKP-225ENST00000636214 HDAC8Q9BY41 377 aa18.28■□□□□ 0.52
PNKP-225ENST00000636214 MAGEH1Q9H213 219 aa18.28■□□□□ 0.52
PNKP-225ENST00000636214 CCDC86Q9H6F5 360 aaKnown RBP18.28■□□□□ 0.52
PNKP-225ENST00000636214 ZDHHC6Q9H6R6 413 aa18.28■□□□□ 0.52
PNKP-225ENST00000636214 TMEM248Q9NWD8 314 aa18.28■□□□□ 0.52
PNKP-225ENST00000636214 ARHGAP20Q9P2F6 1191 aa18.28■□□□□ 0.52
PNKP-225ENST00000636214 FCF1Q9Y324 198 aaKnown RBP18.28■□□□□ 0.52
PNKP-225ENST00000636214 PTPRBP23467 1997 aa18.28■□□□□ 0.52
PNKP-225ENST00000636214 C10orf142B7Z368 130 aa18.27■□□□□ 0.52
PNKP-225ENST00000636214 ENC1O14682 589 aa18.27■□□□□ 0.52
PNKP-225ENST00000636214 LRIG2O94898 1065 aa18.27■□□□□ 0.52
PNKP-225ENST00000636214 PRLRP16471 622 aa18.27■□□□□ 0.52
PNKP-225ENST00000636214 RFC1P35251 1148 aaPredicted RBP18.27■□□□□ 0.52
PNKP-225ENST00000636214 CCNHP51946 323 aaPredicted RBP18.27■□□□□ 0.52
PNKP-225ENST00000636214 FILIP1LQ4L180 1135 aa18.27■□□□□ 0.52
PNKP-225ENST00000636214 WDR59Q6PJI9 974 aa18.27■□□□□ 0.52
PNKP-225ENST00000636214 TMPRSS7Q7RTY8 843 aa18.27■□□□□ 0.52
PNKP-225ENST00000636214 EID2Q8N6I1 236 aa18.27■□□□□ 0.52
PNKP-225ENST00000636214 KLK6Q92876 244 aa18.27■□□□□ 0.52
PNKP-225ENST00000636214 NTAN1Q96AB6 310 aa18.27■□□□□ 0.52
PNKP-225ENST00000636214 EPAS1Q99814 870 aa18.27■□□□□ 0.52
PNKP-225ENST00000636214 TM6SF2Q9BZW4 377 aa18.27■□□□□ 0.52
PNKP-225ENST00000636214 TOR4AQ9NXH8 423 aa18.27■□□□□ 0.52
PNKP-225ENST00000636214 ZNF212Q9UDV6 495 aa18.27■□□□□ 0.52
PNKP-225ENST00000636214 ASPMQ8IZT6 3477 aa18.27■□□□□ 0.52
PNKP-225ENST00000636214 PKD1L2Q7Z442 2459 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms