RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 PDE4DIPQ5VU43 2346 aa12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 ANKRD36A6QL64 1941 aa12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 F5H5T6 163 aa12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 GREM1O60565 184 aa12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 RAMP2O60895 175 aa12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 KRT38O76015 456 aa12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 FGF18O76093 207 aa12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 ALDOAP04075 364 aaKnown RBP12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 VIMP08670 466 aaKnown RBP12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 CNPP09543 421 aaKnown RBP12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 TPH1P17752 444 aa12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 HOXD9P28356 352 aaPredicted RBP12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 OR1E1P30953 314 aa12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 ACVRL1P37023 503 aa12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 RENBPP51606 427 aa12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 LBX1P52954 281 aa12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 GEMP55040 296 aa12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 ZXDBP98169 803 aa12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 DNAJC3Q13217 504 aa12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 PLD1Q13393 1074 aa12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 BMPR2Q13873 1038 aa12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 POLD3Q15054 466 aaPredicted RBP12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 GKAP1Q5VSY0 366 aaPredicted RBP12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 LILRA6Q6PI73 481 aa12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 SPATS2Q86XZ4 545 aaKnown RBP12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 LGI2Q8N0V4 545 aa12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 PGBD5Q8N414 524 aa12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 ARRDC2Q8TBH0 407 aa12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 ADAMTS19Q8TE59 1207 aa12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 ENTPD7Q9NQZ7 604 aa12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 SAMD15Q9P1V8 674 aa12.73□□□□□ -0.37
CACNA1A-219ENST00000635917 GFRA2O00451 464 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 ATP9BO43861 1147 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 PRAMEF11O60813 436 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 ERVK-10P10266 1014 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 SLC11A2P49281 568 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 HARS2P49590 506 aaKnown RBP12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 MPP3Q13368 585 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 TEDDM1Q5T9Z0 273 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 LGSNQ5TDP6 509 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 MROH9Q5TGP6 573 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 ALG1LQ6GMV1 187 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 YTHDF3Q7Z739 585 aaKnown RBP12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 DENND1CQ8IV53 801 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 CFAP52Q8N1V2 620 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 IPMKQ8NFU5 416 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 CDKL2Q92772 493 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 ISL2Q96A47 359 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 ZNF669Q96BR6 464 aaPredicted RBP12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 KLHL5Q96PQ7 755 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 SLC22A12Q96S37 553 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 LRRC3Q9BY71 257 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 VPS11Q9H270 941 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 CXXC1Q9P0U4 656 aaPredicted RBP12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 ZFP37Q9Y6Q3 630 aaPredicted RBP12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 NOTCH4Q99466 2003 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 HELZP42694 1942 aaKnown RBP12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 A0A0D9SEW6 157 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 LPXNO60711 386 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 ARNTP27540 789 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 NMBRP28336 390 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 CORO1AP31146 461 aaKnown RBP12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 SGSHP51688 502 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 CDH4P55283 916 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 RPS24P62847 133 aaKnown RBP12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 VEPH1Q14D04 833 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 ADGRF1Q5T601 910 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 MARC1Q5VT66 337 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 TAX1BP1Q86VP1 789 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 CACNA2D3Q8IZS8 1091 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 SP7Q8TDD2 431 aaPredicted RBP12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 SRPK1Q96SB4 655 aaKnown RBP12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 CPNE1Q99829 537 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 ELAC2Q9BQ52 826 aaKnown RBP12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 FICDQ9BVA6 458 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 VPS45Q9NRW7 570 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 UXTQ9UBK9 157 aaPredicted RBP12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 STK39Q9UEW8 545 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 PRKAG3Q9UGI9 489 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 AGO1Q9UL18 857 aaKnown RBP12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 PCDHB12Q9Y5F1 795 aa12.72□□□□□ -0.37
CACNA1A-219ENST00000635917 PRRG1O14668 218 aa12.71□□□□□ -0.38
CACNA1A-219ENST00000635917 MUSKO15146 869 aa12.71□□□□□ -0.38
CACNA1A-219ENST00000635917 TGM5O43548 720 aa12.71□□□□□ -0.38
CACNA1A-219ENST00000635917 ALADP13716 330 aa12.71□□□□□ -0.38
CACNA1A-219ENST00000635917 GP5P40197 560 aa12.71□□□□□ -0.38
CACNA1A-219ENST00000635917 MAGEA12P43365 314 aa12.71□□□□□ -0.38
CACNA1A-219ENST00000635917 CSRP3P50461 194 aa12.71□□□□□ -0.38
CACNA1A-219ENST00000635917 EPHB3P54753 998 aa12.71□□□□□ -0.38
CACNA1A-219ENST00000635917 WNT3AP56704 352 aa12.71□□□□□ -0.38
CACNA1A-219ENST00000635917 MAXP61244 160 aa12.71□□□□□ -0.38
CACNA1A-219ENST00000635917 PCID2Q5JVF3 399 aa12.71□□□□□ -0.38
CACNA1A-219ENST00000635917 ARMC3Q5W041 872 aa12.71□□□□□ -0.38
CACNA1A-219ENST00000635917 PKN3Q6P5Z2 889 aa12.71□□□□□ -0.38
CACNA1A-219ENST00000635917 POTEHQ6S545 545 aa12.71□□□□□ -0.38
CACNA1A-219ENST00000635917 GAREM2Q75VX8 874 aa12.71□□□□□ -0.38
CACNA1A-219ENST00000635917 SRLQ86TD4 932 aa12.71□□□□□ -0.38
CACNA1A-219ENST00000635917 TMC8Q8IU68 726 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms