RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 FCF1Q9Y324 198 aaKnown RBP9.92□□□□□ -0.82
LINC00339-210ENST00000635675 NYNRINQ9P2P1 1898 aaKnown RBP9.92□□□□□ -0.82
LINC00339-210ENST00000635675 LRRD1A4D1F6 860 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 ZNF487B1APH4 448 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 J3KR12 359 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 MAP3K13O43283 966 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 PSTPIP1O43586 416 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 DNTTP04053 509 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 ACADMP11310 421 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 CD6P30203 668 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 OXTRP30559 389 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 SLC8A1P32418 973 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 CCZ1BP86790 482 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 CCZ1P86791 482 aaPredicted RBP9.91□□□□□ -0.82
LINC00339-210ENST00000635675 KIF5AQ12840 1032 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 LPAL2Q16609 132 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 CARD16Q5EG05 197 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 SPDYCQ5MJ68 293 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 PMS2CLQ68D20 193 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 LAIR1Q6GTX8 287 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 SLC36A4Q6YBV0 504 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 DPY19L3Q6ZPD9 716 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 ARHGAP36Q6ZRI8 547 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 USP30Q70CQ3 517 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 DSG4Q86SJ6 1040 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 DAAM2Q86T65 1068 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 ZNF354CQ86Y25 554 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 TXLNBQ8N3L3 684 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 PCDH20Q8N6Y1 951 aaKnown RBP9.91□□□□□ -0.82
LINC00339-210ENST00000635675 PQLC3Q8N755 202 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 LRRC57Q8N9N7 239 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 CHST14Q8NCH0 376 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 OR8D1Q8WZ84 308 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 VOPP1Q96AW1 172 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 LOXL4Q96JB6 756 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 RNF157Q96PX1 679 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 PABPC3Q9H361 631 aaKnown RBP9.91□□□□□ -0.82
LINC00339-210ENST00000635675 DDX56Q9NY93 547 aaKnown RBP9.91□□□□□ -0.82
LINC00339-210ENST00000635675 WSB2Q9NYS7 404 aaPredicted RBP9.91□□□□□ -0.82
LINC00339-210ENST00000635675 TRIM10Q9UDY6 481 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 IPO11Q9UI26 975 aaKnown RBP9.91□□□□□ -0.82
LINC00339-210ENST00000635675 SARDHQ9UL12 918 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 RAB23Q9ULC3 237 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 PIEZO1Q92508 2521 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 EP300Q09472 2414 aaPredicted RBP9.91□□□□□ -0.82
LINC00339-210ENST00000635675 THADAQ6YHU6 1953 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 WDR87Q6ZQQ6 2873 aa9.91□□□□□ -0.82
LINC00339-210ENST00000635675 DFFAO00273 331 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 MID1O15344 667 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 BNIP3LO60238 219 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 RHOBTB1O94844 696 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 TMCC1O94876 653 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 ADH1BP00325 375 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 GSRP00390 522 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 IL1BP01584 269 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 CTSLP07711 333 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 TNNT1P13805 278 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 C5AR1P21730 350 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 CHRNA3P32297 505 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 SERPINB6P35237 376 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 RECQLP46063 649 aaPredicted RBP9.9□□□□□ -0.82
LINC00339-210ENST00000635675 PSMD8P48556 350 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 METAP1P53582 386 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 NAP1L1P55209 391 aaKnown RBP9.9□□□□□ -0.82
LINC00339-210ENST00000635675 IL10RBQ08334 325 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 PAFAH1B3Q15102 231 aaKnown RBP9.9□□□□□ -0.82
LINC00339-210ENST00000635675 CYTH1Q15438 398 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 ELF2Q15723 593 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 TAZQ16635 292 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 TTC31Q49AM3 519 aaPredicted RBP9.9□□□□□ -0.82
LINC00339-210ENST00000635675 ZFYVE27Q5T4F4 411 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 NCBP2-AS2Q69YL0 99 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 LPCAT2Q7L5N7 544 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 C17orf53Q8N3J3 647 aaPredicted RBP9.9□□□□□ -0.82
LINC00339-210ENST00000635675 AADATQ8N5Z0 425 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 TMIEQ8NEW7 156 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 KIAA1524Q8TCG1 905 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 FAM131CQ96AQ9 280 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 TOE1Q96GM8 510 aaKnown RBP9.9□□□□□ -0.82
LINC00339-210ENST00000635675 ZNF419Q96HQ0 510 aaPredicted RBP9.9□□□□□ -0.82
LINC00339-210ENST00000635675 CCDC114Q96M63 670 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 FBXL12Q9NXK8 326 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 LHX3Q9UBR4 397 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 UBA2Q9UBT2 640 aaPredicted RBP9.9□□□□□ -0.82
LINC00339-210ENST00000635675 PYCARDQ9ULZ3 195 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 FARP1Q9Y4F1 1045 aaPredicted RBP9.9□□□□□ -0.82
LINC00339-210ENST00000635675 WASF2Q9Y6W5 498 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 MYO15AQ9UKN7 3530 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 CEP192Q8TEP8 1941 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 GON4LQ3T8J9 2241 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 NUMA1Q14980 2115 aa9.9□□□□□ -0.82
LINC00339-210ENST00000635675 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 MACROD2A1Z1Q3 448 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 GRID2IPA4D2P6 1211 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 RNF103O00237 685 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 GFRA3O60609 400 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 MAFKO60675 156 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 PEX11BO96011 259 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 PRNPP04156 253 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 KRT1P04264 644 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms