RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 CYP1A2P05177 515 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 TBC1D3HP0C7X1 549 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 PCK1P35558 622 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 ARF5P84085 180 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 SLC18A3Q16572 532 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 UAP1L1Q3KQV9 507 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 POM121L1PQ3SYA9 428 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 BOLA3Q53S33 107 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 PPP6R3Q5H9R7 873 aaPredicted RBP16.01■□□□□ 0.15
LINC00339-207ENST00000634712 KIAA0895LQ68EN5 471 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 TBC1D3GQ6DHY5 549 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 TBC1D3CQ6IPX1 549 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 NCEH1Q6PIU2 408 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 SARM1Q6SZW1 724 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 CNGA4Q8IV77 575 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 TBC1D3Q8IZP1 549 aaPredicted RBP16.01■□□□□ 0.15
LINC00339-207ENST00000634712 RYBPQ8N488 228 aaPredicted RBP16.01■□□□□ 0.15
LINC00339-207ENST00000634712 ARFGAP1Q8N6T3 406 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 TMIEQ8NEW7 156 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 OR2A12Q8NGT7 310 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 OR2T34Q8NGX1 318 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 CTNNBL1Q8WYA6 563 aaPredicted RBP16.01■□□□□ 0.15
LINC00339-207ENST00000634712 BIRC7Q96CA5 298 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 CCDC42Q96M95 316 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 CAPN10Q9HC96 672 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 ABHD10Q9NUJ1 306 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 IL36AQ9UHA7 158 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 SARDHQ9UL12 918 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 NEU3Q9UQ49 428 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.01■□□□□ 0.15
LINC00339-207ENST00000634712 FCF1Q9Y324 198 aaKnown RBP16.01■□□□□ 0.15
LINC00339-207ENST00000634712 SSU72P8A0A1W2PR75 194 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 RASA4BC9J798 803 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 AKR1B15C9JRZ8 316 aaPredicted RBP16■□□□□ 0.15
LINC00339-207ENST00000634712 KPNA3O00505 521 aaPredicted RBP16■□□□□ 0.15
LINC00339-207ENST00000634712 ARHGAP33O14559 1287 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 SLC7A4O43246 635 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 RASA4O43374 803 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 MFAP3LO75121 409 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 H2AFZP0C0S5 128 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 KCNA4P22459 653 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 CD27P26842 260 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 SSR1P43307 286 aaKnown RBP16■□□□□ 0.15
LINC00339-207ENST00000634712 ZNF135P52742 658 aaPredicted RBP16■□□□□ 0.15
LINC00339-207ENST00000634712 SEMA3BQ13214 749 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 MAPK8IP2Q13387 824 aaPredicted RBP16■□□□□ 0.15
LINC00339-207ENST00000634712 CA9Q16790 459 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 PARP15Q460N3 678 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 CARD16Q5EG05 197 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 ARSIQ5FYB1 569 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 H2AFVQ71UI9 128 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 PEBP4Q96S96 227 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 KCTD15Q96SI1 283 aaPredicted RBP16■□□□□ 0.15
LINC00339-207ENST00000634712 ZWILCHQ9H900 591 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 FSCN3Q9NQT6 498 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 CTTNBP2NLQ9P2B4 639 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 LAMA1P25391 3075 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 PLK4O00444 970 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 CDX4O14627 284 aaPredicted RBP16■□□□□ 0.15
LINC00339-207ENST00000634712 ADPRHP54922 357 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 CNTN1Q12860 1018 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 TEAD4Q15561 434 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 LEKR1Q6ZMV7 388 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 DPY19L3Q6ZPD9 716 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 RFX8Q6ZV50 586 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 UMODL1-AS1Q8N2C9 162 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 CHST14Q8NCH0 376 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 ZNF564Q8TBZ8 553 aaPredicted RBP16■□□□□ 0.15
LINC00339-207ENST00000634712 GRIN3AQ8TCU5 1115 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 HSPH1Q92598 858 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 ISG20Q96AZ6 181 aaKnown RBP16■□□□□ 0.15
LINC00339-207ENST00000634712 ARHGEF26Q96DR7 871 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 PPP1R16AQ96I34 528 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 BTBD6Q96KE9 485 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 HEPHQ9BQS7 1158 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 ZDHHC5Q9C0B5 715 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 KDM4CQ9H3R0 1056 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 NHEJ1Q9H9Q4 299 aaPredicted RBP16■□□□□ 0.15
LINC00339-207ENST00000634712 HECAQ9UBI9 543 aaPredicted RBP16■□□□□ 0.15
LINC00339-207ENST00000634712 TPX2Q9ULW0 747 aaKnown RBP16■□□□□ 0.15
LINC00339-207ENST00000634712 ACTL7AQ9Y615 435 aa16■□□□□ 0.15
LINC00339-207ENST00000634712 ARHGAP42A6NI28 874 aa15.99■□□□□ 0.15
LINC00339-207ENST00000634712 H3BRJ5 948 aa15.99■□□□□ 0.15
LINC00339-207ENST00000634712 OPHN1O60890 802 aa15.99■□□□□ 0.15
LINC00339-207ENST00000634712 CTSLP07711 333 aa15.99■□□□□ 0.15
LINC00339-207ENST00000634712 DRD3P35462 400 aa15.99■□□□□ 0.15
LINC00339-207ENST00000634712 ARL4AP40617 200 aa15.99■□□□□ 0.15
LINC00339-207ENST00000634712 AFF3P51826 1226 aaKnown RBP15.99■□□□□ 0.15
LINC00339-207ENST00000634712 NDST2P52849 883 aa15.99■□□□□ 0.15
LINC00339-207ENST00000634712 METAP1P53582 386 aa15.99■□□□□ 0.15
LINC00339-207ENST00000634712 SNRPD1P62314 119 aaKnown RBP15.99■□□□□ 0.15
LINC00339-207ENST00000634712 FOXK2Q01167 660 aa15.99■□□□□ 0.15
LINC00339-207ENST00000634712 SERINC3Q13530 473 aa15.99■□□□□ 0.15
LINC00339-207ENST00000634712 HADHQ16836 314 aaKnown RBP15.99■□□□□ 0.15
LINC00339-207ENST00000634712 SMTNL2Q2TAL5 461 aa15.99■□□□□ 0.15
LINC00339-207ENST00000634712 KCNT1Q5JUK3 1230 aa15.99■□□□□ 0.15
LINC00339-207ENST00000634712 ADAT2Q7Z6V5 191 aaKnown RBP15.99■□□□□ 0.15
LINC00339-207ENST00000634712 NIPA2Q8N8Q9 360 aa15.99■□□□□ 0.15
LINC00339-207ENST00000634712 CASKIN2Q8WXE0 1202 aa15.99■□□□□ 0.15
LINC00339-207ENST00000634712 HMCESQ96FZ2 354 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms