RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 EFL1Q7Z2Z2 1120 aaKnown RBP20.61■□□□□ 0.89
TARDBP-228ENST00000629725 LMO3Q8TAP4 145 aa20.61■□□□□ 0.89
TARDBP-228ENST00000629725 BMFQ96LC9 184 aa20.61■□□□□ 0.89
TARDBP-228ENST00000629725 HDAC8Q9BY41 377 aa20.61■□□□□ 0.89
TARDBP-228ENST00000629725 GOLPH3LQ9H4A5 285 aa20.61■□□□□ 0.89
TARDBP-228ENST00000629725 GPR27Q9NS67 375 aa20.61■□□□□ 0.89
TARDBP-228ENST00000629725 TBC1D30Q9Y2I9 924 aa20.61■□□□□ 0.89
TARDBP-228ENST00000629725 CSNK1G3Q9Y6M4 447 aa20.61■□□□□ 0.89
TARDBP-228ENST00000629725 UBR5O95071 2799 aaPredicted RBP20.6■□□□□ 0.89
TARDBP-228ENST00000629725 SPTY2D1-AS1A0A0U1RR47 76 aa20.6■□□□□ 0.89
TARDBP-228ENST00000629725 EME2A4GXA9 379 aaPredicted RBP20.6■□□□□ 0.89
TARDBP-228ENST00000629725 TRIM49BA6NDI0 452 aa20.6■□□□□ 0.89
TARDBP-228ENST00000629725 POM121BA6NF01 834 aa20.6■□□□□ 0.89
TARDBP-228ENST00000629725 TCEA3O75764 348 aa20.6■□□□□ 0.89
TARDBP-228ENST00000629725 NME1P15531 152 aaKnown RBP20.6■□□□□ 0.89
TARDBP-228ENST00000629725 CSRP3P50461 194 aa20.6■□□□□ 0.89
TARDBP-228ENST00000629725 MTA1Q13330 715 aa20.6■□□□□ 0.89
TARDBP-228ENST00000629725 TAF5Q15542 800 aa20.6■□□□□ 0.89
TARDBP-228ENST00000629725 ZSCAN23Q3MJ62 389 aa20.6■□□□□ 0.89
TARDBP-228ENST00000629725 KYAT3Q6YP21 454 aaKnown RBP20.6■□□□□ 0.89
TARDBP-228ENST00000629725 PARGQ86W56 976 aa20.6■□□□□ 0.89
TARDBP-228ENST00000629725 ARHGEF19Q8IW93 802 aa20.6■□□□□ 0.89
TARDBP-228ENST00000629725 PPP1R16AQ96I34 528 aa20.6■□□□□ 0.89
TARDBP-228ENST00000629725 C2orf49Q9BVC5 232 aaPredicted RBP20.6■□□□□ 0.89
TARDBP-228ENST00000629725 SLC17A9Q9BYT1 436 aa20.6■□□□□ 0.89
TARDBP-228ENST00000629725 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.6■□□□□ 0.89
TARDBP-228ENST00000629725 SALL4Q9UJQ4 1053 aa20.6■□□□□ 0.89
TARDBP-228ENST00000629725 A0A1W2PQ27 194 aa20.59■□□□□ 0.89
TARDBP-228ENST00000629725 A0A1W2PQ64 194 aa20.59■□□□□ 0.89
TARDBP-228ENST00000629725 K7ERQ8 282 aa20.59■□□□□ 0.89
TARDBP-228ENST00000629725 RNF103O00237 685 aa20.59■□□□□ 0.89
TARDBP-228ENST00000629725 AQP9O43315 295 aa20.59■□□□□ 0.89
TARDBP-228ENST00000629725 MED7O43513 233 aa20.59■□□□□ 0.89
TARDBP-228ENST00000629725 PAK4O96013 591 aaPredicted RBP20.59■□□□□ 0.89
TARDBP-228ENST00000629725 CDH4P55283 916 aa20.59■□□□□ 0.89
TARDBP-228ENST00000629725 RPS21P63220 83 aaKnown RBP20.59■□□□□ 0.89
TARDBP-228ENST00000629725 CLN3Q13286 438 aa20.59■□□□□ 0.89
TARDBP-228ENST00000629725 MAPK8IP2Q13387 824 aaPredicted RBP20.59■□□□□ 0.89
TARDBP-228ENST00000629725 PNOCQ13519 176 aa20.59■□□□□ 0.89
TARDBP-228ENST00000629725 MEA1Q16626 185 aa20.59■□□□□ 0.89
TARDBP-228ENST00000629725 ARL13BQ3SXY8 428 aa20.59■□□□□ 0.89
TARDBP-228ENST00000629725 ARSIQ5FYB1 569 aa20.59■□□□□ 0.89
TARDBP-228ENST00000629725 CRTC1Q6UUV9 634 aa20.59■□□□□ 0.89
TARDBP-228ENST00000629725 HSCBQ8IWL3 235 aa20.59■□□□□ 0.89
TARDBP-228ENST00000629725 WDR36Q8NI36 951 aaKnown RBP20.59■□□□□ 0.89
TARDBP-228ENST00000629725 GRIN3AQ8TCU5 1115 aa20.59■□□□□ 0.89
TARDBP-228ENST00000629725 FAM117AQ9C073 453 aa20.59■□□□□ 0.89
TARDBP-228ENST00000629725 IL36AQ9UHA7 158 aa20.59■□□□□ 0.89
TARDBP-228ENST00000629725 IPO11Q9UI26 975 aaKnown RBP20.59■□□□□ 0.89
TARDBP-228ENST00000629725 HEMK1Q9Y5R4 338 aaPredicted RBP20.59■□□□□ 0.89
TARDBP-228ENST00000629725 HS3ST4Q9Y661 456 aa20.59■□□□□ 0.89
TARDBP-228ENST00000629725 PTPN13Q12923 2485 aa20.58■□□□□ 0.89
TARDBP-228ENST00000629725 PMS2P1A4D2B8 440 aa20.58■□□□□ 0.89
TARDBP-228ENST00000629725 P4HA2O15460 535 aa20.58■□□□□ 0.89
TARDBP-228ENST00000629725 SNAP91O60641 907 aa20.58■□□□□ 0.89
TARDBP-228ENST00000629725 TNFSF15O95150 251 aa20.58■□□□□ 0.89
TARDBP-228ENST00000629725 KRT5P13647 590 aa20.58■□□□□ 0.89
TARDBP-228ENST00000629725 RRM1P23921 792 aa20.58■□□□□ 0.89
TARDBP-228ENST00000629725 GGCXP38435 758 aa20.58■□□□□ 0.89
TARDBP-228ENST00000629725 MLLT3P42568 568 aaPredicted RBP20.58■□□□□ 0.89
TARDBP-228ENST00000629725 RABIFP47224 123 aa20.58■□□□□ 0.89
TARDBP-228ENST00000629725 NFATC3Q12968 1075 aa20.58■□□□□ 0.89
TARDBP-228ENST00000629725 NR0B2Q15466 257 aa20.58■□□□□ 0.89
TARDBP-228ENST00000629725 DEFB133Q30KQ1 61 aa20.58■□□□□ 0.89
TARDBP-228ENST00000629725 KIAA1161Q6NSJ0 714 aa20.58■□□□□ 0.89
TARDBP-228ENST00000629725 CLEC14AQ86T13 490 aa20.58■□□□□ 0.89
TARDBP-228ENST00000629725 DEFB106AQ8N104 65 aa20.58■□□□□ 0.89
TARDBP-228ENST00000629725 CHST14Q8NCH0 376 aa20.58■□□□□ 0.89
TARDBP-228ENST00000629725 FEM1CQ96JP0 617 aa20.58■□□□□ 0.89
TARDBP-228ENST00000629725 CCNL2Q96S94 520 aaPredicted RBP20.58■□□□□ 0.89
TARDBP-228ENST00000629725 PSMB7Q99436 277 aa20.58■□□□□ 0.89
TARDBP-228ENST00000629725 IL12RB2Q99665 862 aa20.58■□□□□ 0.89
TARDBP-228ENST00000629725 VPS51Q9UID3 782 aa20.58■□□□□ 0.89
TARDBP-228ENST00000629725 KLF15Q9UIH9 416 aa20.58■□□□□ 0.89
TARDBP-228ENST00000629725 CNTN6Q9UQ52 1028 aa20.58■□□□□ 0.89
TARDBP-228ENST00000629725 TPP1O14773 563 aa20.57■□□□□ 0.88
TARDBP-228ENST00000629725 SMAD6O43541 496 aaKnown RBP20.57■□□□□ 0.88
TARDBP-228ENST00000629725 LEFTY1O75610 366 aa20.57■□□□□ 0.88
TARDBP-228ENST00000629725 LETM1O95202 739 aaPredicted RBP20.57■□□□□ 0.88
TARDBP-228ENST00000629725 GLI1P08151 1106 aa20.57■□□□□ 0.88
TARDBP-228ENST00000629725 JUNDP17535 347 aa20.57■□□□□ 0.88
TARDBP-228ENST00000629725 CLCN6P51797 869 aa20.57■□□□□ 0.88
TARDBP-228ENST00000629725 NEK3P51956 506 aa20.57■□□□□ 0.88
TARDBP-228ENST00000629725 NME3Q13232 169 aa20.57■□□□□ 0.88
TARDBP-228ENST00000629725 PDCLQ13371 301 aa20.57■□□□□ 0.88
TARDBP-228ENST00000629725 PDE1CQ14123 709 aaPredicted RBP20.57■□□□□ 0.88
TARDBP-228ENST00000629725 FGL2Q14314 439 aa20.57■□□□□ 0.88
TARDBP-228ENST00000629725 CCDC40Q4G0X9 1142 aa20.57■□□□□ 0.88
TARDBP-228ENST00000629725 C14orf80Q86SX3 495 aa20.57■□□□□ 0.88
TARDBP-228ENST00000629725 LMX1AQ8TE12 382 aa20.57■□□□□ 0.88
TARDBP-228ENST00000629725 ZNF606Q8WXB4 792 aa20.57■□□□□ 0.88
TARDBP-228ENST00000629725 KREMEN1Q96MU8 473 aa20.57■□□□□ 0.88
TARDBP-228ENST00000629725 SLC2A13Q96QE2 648 aa20.57■□□□□ 0.88
TARDBP-228ENST00000629725 WDR70Q9NW82 654 aa20.57■□□□□ 0.88
TARDBP-228ENST00000629725 IL17BQ9UHF5 180 aa20.57■□□□□ 0.88
TARDBP-228ENST00000629725 MUSKO15146 869 aa20.56■□□□□ 0.88
TARDBP-228ENST00000629725 RAD51BO15315 384 aa20.56■□□□□ 0.88
TARDBP-228ENST00000629725 PAGE1O75459 146 aa20.56■□□□□ 0.88
TARDBP-228ENST00000629725 RHOCP08134 193 aa20.56■□□□□ 0.88
TARDBP-228ENST00000629725 RECQLP46063 649 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms