RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 ALLCQ8N6M5 410 aa12.97□□□□□ -0.33
SCN8A-209ENST00000627620 ANKRD52Q8NB46 1076 aa12.97□□□□□ -0.33
SCN8A-209ENST00000627620 SELENOMQ8WWX9 145 aa12.97□□□□□ -0.33
SCN8A-209ENST00000627620 LPPQ93052 612 aa12.97□□□□□ -0.33
SCN8A-209ENST00000627620 MYLPFQ96A32 169 aa12.97□□□□□ -0.33
SCN8A-209ENST00000627620 SAR1AQ9NR31 198 aa12.97□□□□□ -0.33
SCN8A-209ENST00000627620 LBPP18428 481 aa12.97□□□□□ -0.33
SCN8A-209ENST00000627620 ATP4AP20648 1035 aa12.97□□□□□ -0.33
SCN8A-209ENST00000627620 LRPAP1P30533 357 aa12.97□□□□□ -0.33
SCN8A-209ENST00000627620 RPL22P35268 128 aaKnown RBP12.97□□□□□ -0.33
SCN8A-209ENST00000627620 ABL2P42684 1182 aa12.97□□□□□ -0.33
SCN8A-209ENST00000627620 MAGEA10P43363 369 aaPredicted RBP12.97□□□□□ -0.33
SCN8A-209ENST00000627620 C15orf52Q6ZUT6 534 aaKnown RBP12.97□□□□□ -0.33
SCN8A-209ENST00000627620 HDDC2Q7Z4H3 204 aa12.97□□□□□ -0.33
SCN8A-209ENST00000627620 HELQQ8TDG4 1101 aa12.97□□□□□ -0.33
SCN8A-209ENST00000627620 SKA1Q96BD8 255 aa12.97□□□□□ -0.33
SCN8A-209ENST00000627620 CERS2Q96G23 380 aa12.97□□□□□ -0.33
SCN8A-209ENST00000627620 ZYG11BQ9C0D3 744 aa12.97□□□□□ -0.33
SCN8A-209ENST00000627620 SERHL2Q9H4I8 314 aa12.97□□□□□ -0.33
SCN8A-209ENST00000627620 SERHLQ9NQF3 203 aa12.97□□□□□ -0.33
SCN8A-209ENST00000627620 GNPTGQ9UJJ9 305 aa12.97□□□□□ -0.33
SCN8A-209ENST00000627620 DEPDC5O75140 1603 aa12.97□□□□□ -0.33
SCN8A-209ENST00000627620 A0A088AWK7 358 aa12.97□□□□□ -0.33
SCN8A-209ENST00000627620 SLC15A5A6NIM6 579 aa12.97□□□□□ -0.33
SCN8A-209ENST00000627620 ZNF10P21506 573 aaPredicted RBP12.97□□□□□ -0.33
SCN8A-209ENST00000627620 THOP1P52888 689 aa12.97□□□□□ -0.33
SCN8A-209ENST00000627620 PKNOX1P55347 436 aa12.97□□□□□ -0.33
SCN8A-209ENST00000627620 NOMO2Q5JPE7 1267 aa12.97□□□□□ -0.33
SCN8A-209ENST00000627620 MARK2Q7KZI7 788 aaKnown RBP12.97□□□□□ -0.33
SCN8A-209ENST00000627620 CXorf40AQ8TE69 158 aa12.97□□□□□ -0.33
SCN8A-209ENST00000627620 SLC9A3R1O14745 358 aaPredicted RBP12.96□□□□□ -0.33
SCN8A-209ENST00000627620 VAV1P15498 845 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 GNA13Q14344 377 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 PCBP1Q15365 356 aaKnown RBP eCLIP12.96□□□□□ -0.33
SCN8A-209ENST00000627620 IRAK1BP1Q5VVH5 260 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 NEK10Q6ZWH5 1172 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 CERS5Q8N5B7 392 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 FAM45AQ8TCE6 357 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 OMDQ99983 421 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 C9orf16Q9BUW7 83 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 SEMA6AQ9H2E6 1030 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 COPG2Q9UBF2 871 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 MSCO60682 206 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 KCNH1O95259 989 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 PFKPQ01813 784 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 PCDH20Q8N6Y1 951 aaKnown RBP12.96□□□□□ -0.33
SCN8A-209ENST00000627620 PTGR2Q8N8N7 351 aaPredicted RBP12.96□□□□□ -0.33
SCN8A-209ENST00000627620 QRFPRQ96P65 431 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 MRPS26Q9BYN8 205 aaKnown RBP12.96□□□□□ -0.33
SCN8A-209ENST00000627620 VPS45Q9NRW7 570 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 FBXL21Q9UKT6 434 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 PCDHAC2Q9Y5I4 1007 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 ZW10O43264 779 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 PSEN1P49768 467 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 SKP1P63208 163 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 FMO1Q01740 532 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 NEDD8Q15843 81 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 FAM187BQ17R55 369 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 POMGNT2Q8NAT1 580 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 IL31RAQ8NI17 732 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 ZBTB10Q96DT7 871 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 SPACA7Q96KW9 195 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 RHBGQ9H310 441 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 PCYOX1Q9UHG3 505 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 SATB2Q9UPW6 733 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 TPRKBQ9Y3C4 175 aa12.96□□□□□ -0.33
SCN8A-209ENST00000627620 PIPSLA2A3N6 862 aa12.96□□□□□ -0.34
SCN8A-209ENST00000627620 CARNS1A5YM72 827 aa12.96□□□□□ -0.34
SCN8A-209ENST00000627620 GUCY1B2O75343 617 aa12.96□□□□□ -0.34
SCN8A-209ENST00000627620 UMPSP11172 480 aa12.96□□□□□ -0.34
SCN8A-209ENST00000627620 PIK3R1P27986 724 aa12.96□□□□□ -0.34
SCN8A-209ENST00000627620 FLT3P36888 993 aa12.96□□□□□ -0.34
SCN8A-209ENST00000627620 NAGLUP54802 743 aa12.96□□□□□ -0.34
SCN8A-209ENST00000627620 INHBEP58166 350 aa12.96□□□□□ -0.34
SCN8A-209ENST00000627620 TRIM25Q14258 630 aaKnown RBP12.96□□□□□ -0.34
SCN8A-209ENST00000627620 ZDHHC13Q8IUH4 622 aa12.96□□□□□ -0.34
SCN8A-209ENST00000627620 OR5B17Q8NGF7 314 aa12.96□□□□□ -0.34
SCN8A-209ENST00000627620 BPIFA1Q9NP55 256 aa12.96□□□□□ -0.34
SCN8A-209ENST00000627620 BTBD7Q9P203 1132 aa12.96□□□□□ -0.34
SCN8A-209ENST00000627620 TBL1XO60907 577 aa12.95□□□□□ -0.34
SCN8A-209ENST00000627620 BCL10O95999 233 aa12.95□□□□□ -0.34
SCN8A-209ENST00000627620 IFNGR2P38484 337 aa12.95□□□□□ -0.34
SCN8A-209ENST00000627620 HK2P52789 917 aa12.95□□□□□ -0.34
SCN8A-209ENST00000627620 PURAQ00577 322 aaKnown RBP12.95□□□□□ -0.34
SCN8A-209ENST00000627620 SPIDRQ14159 915 aa12.95□□□□□ -0.34
SCN8A-209ENST00000627620 LRRC74BQ6ZQY2 392 aa12.95□□□□□ -0.34
SCN8A-209ENST00000627620 GPR142Q7Z601 462 aa12.95□□□□□ -0.34
SCN8A-209ENST00000627620 PHF13Q86YI8 300 aaPredicted RBP12.95□□□□□ -0.34
SCN8A-209ENST00000627620 SLC9A9Q8IVB4 645 aa12.95□□□□□ -0.34
SCN8A-209ENST00000627620 RORBQ92753 470 aa12.95□□□□□ -0.34
SCN8A-209ENST00000627620 CORO1BQ9BR76 489 aa12.95□□□□□ -0.34
SCN8A-209ENST00000627620 HDHD2Q9H0R4 259 aa12.95□□□□□ -0.34
SCN8A-209ENST00000627620 ATP6V1HQ9UI12 483 aa12.95□□□□□ -0.34
SCN8A-209ENST00000627620 C2CD2Q9Y426 696 aa12.95□□□□□ -0.34
SCN8A-209ENST00000627620 ARHGAP23Q9P227 1491 aa12.95□□□□□ -0.34
SCN8A-209ENST00000627620 IQGAP1P46940 1657 aa12.95□□□□□ -0.34
SCN8A-209ENST00000627620 H0YC42 278 aa12.95□□□□□ -0.34
SCN8A-209ENST00000627620 EPHB6O15197 1021 aa12.95□□□□□ -0.34
SCN8A-209ENST00000627620 NBNO60934 754 aa12.95□□□□□ -0.34
SCN8A-209ENST00000627620 SASH3O75995 380 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms