RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 HARS2P49590 506 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 SEMA5AQ13591 1074 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 KYNUQ16719 465 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 TTMPQ5BVD1 217 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 DENND2CQ68D51 928 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 TXNDC8Q6A555 127 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 LRIG3Q6UXM1 1119 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 ARHGEF18Q6ZSZ5 1173 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 TRMT10CQ7L0Y3 403 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 CAND1Q86VP6 1230 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 CHSY1Q86X52 802 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 CIR1Q86X95 450 aaPredicted RBP9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 NPAS3Q8IXF0 933 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 ZBTB44Q8NCP5 570 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 PLD4Q96BZ4 506 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 C9orf72Q96LT7 481 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 PRICKLE1Q96MT3 831 aaPredicted RBP9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 TSGA13Q96PP4 275 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 ZYG11BQ9C0D3 744 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 TRPV5Q9NQA5 729 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 TMEM248Q9NWD8 314 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 HCFC1R1Q9NWW0 138 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 CACNA1AO00555 2505 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 EP300Q09472 2414 aaPredicted RBP9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 MYOFQ9NZM1 2061 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 MTSS1O43312 755 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 OPHN1O60890 802 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 LILRB5O75023 590 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 AVILO75366 819 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 PEX11BO96011 259 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 RHOQP17081 205 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 GRIA1P42261 906 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 MAGEA3P43357 314 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 MAGEA4P43358 317 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 SLC11A2P49281 568 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 SGSHP51688 502 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 ZNF33AQ06730 810 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 HP1BP3Q5SSJ5 553 aaPredicted RBP9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 STXBP5Q5T5C0 1151 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 RFWD3Q6PCD5 774 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 PPP1R21Q6ZMI0 780 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 CENPUQ71F23 418 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 TFAP2DQ7Z6R9 452 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 IGDCC3Q8IVU1 814 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 CCDC13Q8IYE1 715 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 UMODL1-AS1Q8N2C9 162 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 CNTD1Q8N815 330 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 LEMD2Q8NC56 503 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 OR52K2Q8NGK3 314 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 RPRD1AQ96P16 312 aaPredicted RBP9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 PHACTR1Q9C0D0 580 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 PLAC1Q9HBJ0 212 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 SEPT10Q9P0V9 454 aa9.7□□□□□ -0.86
PDLIM5-223ENST00000627587 CACNA1IQ9P0X4 2223 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 GOLGA6L10A6NI86 522 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 F5H423 210 aaPredicted RBP9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 DFFAO00273 331 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 GFRA2O00451 464 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 ALOX15BO15296 676 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 ACSL4O60488 711 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 ACSL3O95573 720 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 APRTP07741 180 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 RHOP08100 348 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 TACR2P21452 398 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 PSMB4P28070 264 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 GABRR2P28476 465 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 CORO1AP31146 461 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 EIF3BP55884 814 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 ARL4CP56559 192 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 CYP4F8P98187 520 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 IFFO1Q0D2I5 559 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 HIF1AQ16665 826 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 RSPO4Q2I0M5 234 aaPredicted RBP9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 TPRG1Q6ZUI0 275 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 DENND1CQ8IV53 801 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 PDIK1LQ8N165 341 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 CFAP52Q8N1V2 620 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 DCLK2Q8N568 766 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 ATPAF2Q8N5M1 289 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 ARL14EPQ8N8R7 260 aaPredicted RBP9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 UHMK1Q8TAS1 419 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 MRPS31Q92665 395 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 IRF7Q92985 503 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 EXOC4Q96A65 974 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 E2F7Q96AV8 911 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 SERPINB12Q96P63 405 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 KXD1Q9BQD3 176 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 FRMD8Q9BZ67 464 aaPredicted RBP9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 ZFP14Q9HCL3 533 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 TRPC7Q9HCX4 862 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 SAYSD1Q9NPB0 183 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 SMPD4Q9NXE4 827 aa9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 AGO1Q9UL18 857 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-223ENST00000627587 E7EVH7 732 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 F5H5T6 163 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 ZBTB24O43167 697 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 RNF40O75150 1001 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 MOSPD3O75425 235 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 MBL2P11226 248 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 GJA1P17302 382 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms