RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 MRPL10Q7Z7H8 261 aaKnown RBP9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 TAC4Q86UU9 113 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 KBTBD6Q86V97 674 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 ARHGAP12Q8IWW6 846 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 DEFB107AQ8IZN7 70 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 TNS4Q8IZW8 715 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 LSMEM2Q8N112 164 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 SLC25A41Q8N5S1 370 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 LZTR1Q8N653 840 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 ACVR1CQ8NER5 493 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 RP9Q8TA86 221 aaKnown RBP9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 PPP1R13LQ8WUF5 828 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 ZFP42Q96MM3 310 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 OR52B2Q96RD2 323 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 HAPLN3Q96S86 360 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 TBL1YQ9BQ87 522 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 LBHD1Q9BQE6 289 aaPredicted RBP9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 KLHL4Q9C0H6 718 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 TKTL2Q9H0I9 626 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 AP5M1Q9H0R1 490 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 GLOD4Q9HC38 313 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 CHST12Q9NRB3 414 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 SLC39A10Q9ULF5 831 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 NEU3Q9UQ49 428 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 GIT1Q9Y2X7 761 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 TRPV2Q9Y5S1 764 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 SNX10Q9Y5X0 201 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 TRPM7Q96QT4 1865 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 PTPRDP23468 1912 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 E2F8A0AVK6 867 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 FGF10O15520 208 aaPredicted RBP9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 PDE5AO76074 875 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 PIGNO95427 931 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 PGK1P00558 417 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 IGHA2P01877 340 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 CYP11A1P05108 521 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 THP07101 528 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 SLC35E2BP0CK96 405 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 UQCRBP14927 111 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 GABRB3P28472 473 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 SERPINB5P36952 375 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 ABCG1P45844 678 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 GRIA4P48058 902 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 ARCN1P48444 511 aaKnown RBP9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 RABGGTBP53611 331 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 DNAJB13P59910 316 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 FKBP1BP68106 108 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 MSLNQ13421 630 aaPredicted RBP9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 USP10Q14694 798 aaKnown RBP9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 RFTN1Q14699 578 aaPredicted RBP9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 SMAD1Q15797 465 aaKnown RBP9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 LSM12Q3MHD2 195 aaKnown RBP9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 SFT2D3Q587I9 215 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 SH2D4BQ5SQS7 431 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 ARTNQ5T4W7 220 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 OGFRL1Q5TC84 451 aaPredicted RBP9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 AFMIDQ63HM1 303 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 SEL1L3Q68CR1 1132 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 DENND5AQ6IQ26 1287 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 LRRC8EQ6NSJ5 796 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 POTEHQ6S545 545 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 RAPH1Q70E73 1250 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 OTOP3Q7RTS5 596 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 TMC7Q7Z402 723 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 TMEM126BQ8IUX1 230 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 ARHGAP18Q8N392 663 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 PPHLN1Q8NEY8 458 aaKnown RBP9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 SLC26A7Q8TE54 656 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 DQX1Q8TE96 717 aaKnown RBP9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 GDPD5Q8WTR4 605 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 ZFAND2BQ8WV99 257 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 KCTD4Q8WVF5 259 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 PYDC1Q8WXC3 89 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 MYLPFQ96A32 169 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 ATXN7L3BQ96GX2 97 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 GPR78Q96P69 363 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 LENG8Q96PV6 779 aaPredicted RBP9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 BTBD9Q96Q07 612 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 SERPINI1Q99574 410 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 TSC22D3Q99576 134 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 PKMYT1Q99640 499 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 APBA2Q99767 749 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 APOL2Q9BQE5 337 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 RTP3Q9BQQ7 232 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 ACBD6Q9BR61 282 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 TASP1Q9H6P5 420 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 FAM105AQ9NUU6 356 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 MIOSQ9NXC5 875 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 STK39Q9UEW8 545 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 ADAMTS6Q9UKP5 1117 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 PSMD13Q9UNM6 376 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 RUVBL2Q9Y230 463 aaKnown RBP9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 TBC1D30Q9Y2I9 924 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 ACOT9Q9Y305 439 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 NUP205Q92621 2012 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 MYLKQ15746 1914 aa9.76□□□□□ -0.85
IGHV3-54-201ENST00000622166 NLRC5Q86WI3 1866 aa9.75□□□□□ -0.85
IGHV3-54-201ENST00000622166 A0A087X1B8 175 aa9.75□□□□□ -0.85
IGHV3-54-201ENST00000622166 LOC100653049A0A140TA62 436 aa9.75□□□□□ -0.85
IGHV3-54-201ENST00000622166 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms