RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 S100A3P33764 101 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 CDK9P50750 372 aaKnown RBP11.74□□□□□ -0.53
CLTC-215ENST00000621829 MXD1Q05195 221 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 SYCE2Q6PIF2 218 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 DEPDC4Q8N2C3 294 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 SERAC1Q96JX3 654 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 FADS3Q9Y5Q0 445 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 PTPN1P18031 435 aaKnown RBP11.74□□□□□ -0.53
CLTC-215ENST00000621829 CRABP2P29373 138 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 SDC2P34741 201 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 MTHFRP42898 656 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 SCN1BQ07699 218 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 SLFN11Q7Z7L1 901 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 MSL3Q8N5Y2 521 aaKnown RBP11.74□□□□□ -0.53
CLTC-215ENST00000621829 TNFAIP8L1Q8WVP5 186 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 EMILIN2Q9BXX0 1053 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 XPNPEP3Q9NQH7 507 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 SAMHD1Q9Y3Z3 626 aaKnown RBP11.74□□□□□ -0.53
CLTC-215ENST00000621829 CSDE1O75534 798 aaKnown RBP11.74□□□□□ -0.53
CLTC-215ENST00000621829 OR6A2O95222 327 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 APOC1P02654 83 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 IFNA16P05015 189 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 TSPAN8P19075 237 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 ITGALP20701 1170 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 TNFRSF8P28908 595 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 ABCG1P45844 678 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 RAP1GAPP47736 663 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 AQP4P55087 323 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 FAPQ12884 760 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 SPANXN3Q5MJ09 141 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 CXorf57Q6NSI4 855 aaKnown RBP11.74□□□□□ -0.53
CLTC-215ENST00000621829 RPTNQ6XPR3 784 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 ZNF350Q9GZX5 532 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 ELL3Q9HB65 397 aaPredicted RBP11.74□□□□□ -0.53
CLTC-215ENST00000621829 DDIT4Q9NX09 232 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 GRIP1Q9Y3R0 1128 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 PDE2AO00408 941 aaPredicted RBP11.74□□□□□ -0.53
CLTC-215ENST00000621829 SGTAO43765 313 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 UGT1A9O60656 530 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 BANF1O75531 89 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 UGT1A6P19224 532 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 UGT1A1P22309 533 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 UGT1A4P22310 534 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 CYP2F1P24903 491 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 UGT1A3P35503 534 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 UGT1A5P35504 534 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 CD151P48509 253 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 EFNA5P52803 228 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 SEZ6Q53EL9 994 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 SLC41A1Q8IVJ1 513 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 UGT1A7Q9HAW7 530 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 UGT1A10Q9HAW8 530 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 UGT1A8Q9HAW9 530 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 AGPAT3Q9NRZ7 376 aa11.74□□□□□ -0.53
CLTC-215ENST00000621829 KYAT1Q16773 422 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 CYP4V2Q6ZWL3 525 aaPredicted RBP11.73□□□□□ -0.53
CLTC-215ENST00000621829 RXFP2Q8WXD0 754 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 PRR5-ARHGAP8B1AHC4 643 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 NTRK1P04629 796 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 ITGB3P05106 788 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 NFKB1P19838 968 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 HNF4AP41235 474 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 S100A12P80511 92 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 ARHGAP8P85298 464 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 GNA12Q03113 381 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 STARD3Q14849 445 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 ANKS6Q68DC2 871 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 GAL3ST3Q96A11 431 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 ELMO3Q96BJ8 720 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 SENP2Q9HC62 589 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 DRG1Q9Y295 367 aaKnown RBP11.73□□□□□ -0.53
CLTC-215ENST00000621829 DENND4BO75064 1496 aaPredicted RBP11.73□□□□□ -0.53
CLTC-215ENST00000621829 M0R036 132 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 CYBBP04839 570 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 TAF13Q15543 124 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 FAM220AQ7Z4H9 259 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 AKAP1Q92667 903 aaKnown RBP eCLIP11.73□□□□□ -0.53
CLTC-215ENST00000621829 PMM1Q92871 262 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 RFT1Q96AA3 541 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 SLAIN2Q9P270 581 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 LAMC3Q9Y6N6 1575 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 SMCO3A2RU48 225 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 ENDOD1O94919 500 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 ALDH3A2P51648 485 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 TMEM62Q0P6H9 643 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 ARHGAP15Q53QZ3 475 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 FAAH2Q6GMR7 532 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 PDPRQ8NCN5 879 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 NIF3L1Q9GZT8 377 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 SEMA4BQ9NPR2 832 aaPredicted RBP11.73□□□□□ -0.53
CLTC-215ENST00000621829 SORCS3Q9UPU3 1222 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 CRYL1Q9Y2S2 319 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 RGS14O43566 566 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 PRH1P02810 166 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 SEMA3AQ14563 771 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 PHF10Q8WUB8 498 aaKnown RBP11.73□□□□□ -0.53
CLTC-215ENST00000621829 NT5MQ9NPB1 228 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 GNAO1P09471 354 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 PGAM1P18669 254 aa11.73□□□□□ -0.53
CLTC-215ENST00000621829 GRIA4P48058 902 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms