RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 C22orf39Q6P5X5 142 aa18.35■□□□□ 0.53
SCAMP4-213ENST00000621748 ZNF571Q7Z3V5 609 aaPredicted RBP18.35■□□□□ 0.53
SCAMP4-213ENST00000621748 SLFN11Q7Z7L1 901 aa18.35■□□□□ 0.53
SCAMP4-213ENST00000621748 TBC1D3Q8IZP1 549 aaPredicted RBP18.35■□□□□ 0.53
SCAMP4-213ENST00000621748 PYROXD2Q8N2H3 581 aa18.35■□□□□ 0.53
SCAMP4-213ENST00000621748 MRFAP1L1Q96HT8 127 aa18.35■□□□□ 0.53
SCAMP4-213ENST00000621748 SLC6A18Q96N87 628 aa18.35■□□□□ 0.53
SCAMP4-213ENST00000621748 CNPY3Q9BT09 278 aa18.35■□□□□ 0.53
SCAMP4-213ENST00000621748 ACE2Q9BYF1 805 aaPredicted RBP18.35■□□□□ 0.53
SCAMP4-213ENST00000621748 EDEM3Q9BZQ6 932 aa18.35■□□□□ 0.53
SCAMP4-213ENST00000621748 TMEM248Q9NWD8 314 aa18.35■□□□□ 0.53
SCAMP4-213ENST00000621748 WASF3Q9UPY6 502 aa18.35■□□□□ 0.53
SCAMP4-213ENST00000621748 CEP295Q9C0D2 2601 aa18.34■□□□□ 0.53
SCAMP4-213ENST00000621748 C1QTNF3-AMACRE9PGA6 284 aa18.34■□□□□ 0.53
SCAMP4-213ENST00000621748 SLC7A4O43246 635 aa18.34■□□□□ 0.53
SCAMP4-213ENST00000621748 PLRG1O43660 514 aaKnown RBP18.34■□□□□ 0.53
SCAMP4-213ENST00000621748 CD160O95971 181 aa18.34■□□□□ 0.53
SCAMP4-213ENST00000621748 CHRNA3P32297 505 aa18.34■□□□□ 0.53
SCAMP4-213ENST00000621748 SIM1P81133 766 aaPredicted RBP18.34■□□□□ 0.53
SCAMP4-213ENST00000621748 SLC20A2Q08357 652 aa18.34■□□□□ 0.53
SCAMP4-213ENST00000621748 FOXC1Q12948 553 aa18.34■□□□□ 0.53
SCAMP4-213ENST00000621748 SFMBT2Q5VUG0 894 aa18.34■□□□□ 0.53
SCAMP4-213ENST00000621748 RETSATQ6NUM9 610 aa18.34■□□□□ 0.53
SCAMP4-213ENST00000621748 DCUN1D2Q6PH85 259 aa18.34■□□□□ 0.53
SCAMP4-213ENST00000621748 TMC6Q7Z403 805 aa18.34■□□□□ 0.53
SCAMP4-213ENST00000621748 NAXDQ8IW45 347 aa18.34■□□□□ 0.53
SCAMP4-213ENST00000621748 CPLX3Q8WVH0 158 aa18.34■□□□□ 0.53
SCAMP4-213ENST00000621748 ARHGEF2Q92974 986 aaKnown RBP18.34■□□□□ 0.53
SCAMP4-213ENST00000621748 TBC1D31Q96DN5 1066 aa18.34■□□□□ 0.53
SCAMP4-213ENST00000621748 VCPIP1Q96JH7 1222 aa18.34■□□□□ 0.53
SCAMP4-213ENST00000621748 TM7SF3Q9NS93 570 aa18.34■□□□□ 0.53
SCAMP4-213ENST00000621748 ZNHIT6Q9NWK9 470 aaKnown RBP18.34■□□□□ 0.53
SCAMP4-213ENST00000621748 FARP1Q9Y4F1 1045 aaPredicted RBP18.34■□□□□ 0.53
SCAMP4-213ENST00000621748 MAP1BP46821 2468 aaKnown RBP18.34■□□□□ 0.53
SCAMP4-213ENST00000621748 ANKRD62A6NC57 917 aa18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 DDX3XO00571 662 aaKnown RBP eCLIP18.33■□□□□ 0.526e-12■□□□□ 10.5
SCAMP4-213ENST00000621748 ATMINO43313 823 aaPredicted RBP18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 LATO43561 262 aa18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 WNT1P04628 370 aa18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 ZNF883P0CG24 379 aa18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 SKILP12757 684 aa18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 L1CAMP32004 1257 aa18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 PRKCIP41743 596 aa18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 CTSKP43235 329 aa18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 MAPKAPK2P49137 400 aa18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 SERPINH1P50454 418 aaKnown RBP18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 TAS2R38P59533 333 aa18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 MAMLD1Q13495 774 aa18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 FIGNQ5HY92 759 aa18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 DPY19L3Q6ZPD9 716 aa18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 ADAT2Q7Z6V5 191 aaKnown RBP18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 VSTM4Q8IW00 320 aa18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 TMIEQ8NEW7 156 aa18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 ARRDC3Q96B67 414 aa18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 CCDC114Q96M63 670 aa18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 KDM4CQ9H3R0 1056 aa18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 RETREG1Q9H6L5 497 aa18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 ARHGAP20Q9P2F6 1191 aa18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 FZD10Q9ULW2 581 aa18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 FCF1Q9Y324 198 aaKnown RBP18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 LUC7L2Q9Y383 392 aaKnown RBP18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 EPG5Q9HCE0 2579 aa18.33■□□□□ 0.52
SCAMP4-213ENST00000621748 KPNA3O00505 521 aaPredicted RBP18.32■□□□□ 0.52
SCAMP4-213ENST00000621748 VILLO15195 856 aa18.32■□□□□ 0.52
SCAMP4-213ENST00000621748 CBFA2T3O75081 653 aa18.32■□□□□ 0.52
SCAMP4-213ENST00000621748 SPINK2P20155 84 aa18.32■□□□□ 0.52
SCAMP4-213ENST00000621748 KLHL30Q0D2K2 578 aa18.32■□□□□ 0.52
SCAMP4-213ENST00000621748 ARSIQ5FYB1 569 aa18.32■□□□□ 0.52
SCAMP4-213ENST00000621748 EFHC2Q5JST6 749 aa18.32■□□□□ 0.52
SCAMP4-213ENST00000621748 PIP5KL1Q5T9C9 394 aa18.32■□□□□ 0.52
SCAMP4-213ENST00000621748 PLEKHA7Q6IQ23 1121 aa18.32■□□□□ 0.52
SCAMP4-213ENST00000621748 DBX2Q6ZNG2 339 aa18.32■□□□□ 0.52
SCAMP4-213ENST00000621748 SERAC1Q96JX3 654 aa18.32■□□□□ 0.52
SCAMP4-213ENST00000621748 CEP44Q9C0F1 390 aa18.32■□□□□ 0.52
SCAMP4-213ENST00000621748 AASDHPPTQ9NRN7 309 aa18.32■□□□□ 0.52
SCAMP4-213ENST00000621748 PARVAQ9NVD7 372 aa18.32■□□□□ 0.52
SCAMP4-213ENST00000621748 FRYQ5TBA9 3013 aa18.31■□□□□ 0.52
SCAMP4-213ENST00000621748 A0A1W2PQJ5 194 aa18.31■□□□□ 0.52
SCAMP4-213ENST00000621748 A0A1W2PR77 199 aa18.31■□□□□ 0.52
SCAMP4-213ENST00000621748 H0Y8X5 98 aa18.31■□□□□ 0.52
SCAMP4-213ENST00000621748 LEFTY1O75610 366 aa18.31■□□□□ 0.52
SCAMP4-213ENST00000621748 FTLP02792 175 aaPredicted RBP18.31■□□□□ 0.52
SCAMP4-213ENST00000621748 PRNPP04156 253 aa18.31■□□□□ 0.52
SCAMP4-213ENST00000621748 EPHB2P29323 1055 aa18.31■□□□□ 0.52
SCAMP4-213ENST00000621748 MAT2AP31153 395 aaKnown RBP18.31■□□□□ 0.52
SCAMP4-213ENST00000621748 ETFBP38117 255 aa18.31■□□□□ 0.52
SCAMP4-213ENST00000621748 PBX1P40424 430 aa18.31■□□□□ 0.52
SCAMP4-213ENST00000621748 DNA2P51530 1060 aa18.31■□□□□ 0.52
SCAMP4-213ENST00000621748 HNRNPDQ14103 355 aaKnown RBP18.31■□□□□ 0.52
SCAMP4-213ENST00000621748 POLD3Q15054 466 aaPredicted RBP18.31■□□□□ 0.52
SCAMP4-213ENST00000621748 TRIP6Q15654 476 aaKnown RBP18.31■□□□□ 0.52
SCAMP4-213ENST00000621748 PRAMEF14Q5SWL7 426 aa18.31■□□□□ 0.52
SCAMP4-213ENST00000621748 PPP1R2P3Q6NXS1 205 aa18.31■□□□□ 0.52
SCAMP4-213ENST00000621748 PCDH20Q8N6Y1 951 aaKnown RBP18.31■□□□□ 0.52
SCAMP4-213ENST00000621748 GRIN3AQ8TCU5 1115 aa18.31■□□□□ 0.52
SCAMP4-213ENST00000621748 SETD7Q8WTS6 366 aaKnown RBP18.31■□□□□ 0.52
SCAMP4-213ENST00000621748 MAGEH1Q9H213 219 aa18.31■□□□□ 0.52
SCAMP4-213ENST00000621748 NOL6Q9H6R4 1146 aaKnown RBP18.31■□□□□ 0.52
SCAMP4-213ENST00000621748 IL36AQ9UHA7 158 aa18.31■□□□□ 0.52
SCAMP4-213ENST00000621748 PCOLCE2Q9UKZ9 415 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms