RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 METTL3Q86U44 580 aaKnown RBP18.93■□□□□ 0.62
CIRBP-245ENST00000621399 CACUL1Q86Y37 369 aa18.93■□□□□ 0.62
CIRBP-245ENST00000621399 STK40Q8N2I9 435 aa18.93■□□□□ 0.62
CIRBP-245ENST00000621399 ATPAF2Q8N5M1 289 aa18.93■□□□□ 0.62
CIRBP-245ENST00000621399 ZBTB44Q8NCP5 570 aa18.93■□□□□ 0.62
CIRBP-245ENST00000621399 CASKIN2Q8WXE0 1202 aa18.93■□□□□ 0.62
CIRBP-245ENST00000621399 SIPA1Q96FS4 1042 aa18.93■□□□□ 0.62
CIRBP-245ENST00000621399 CCDC114Q96M63 670 aa18.93■□□□□ 0.62
CIRBP-245ENST00000621399 RSPH9Q9H1X1 276 aaPredicted RBP18.93■□□□□ 0.62
CIRBP-245ENST00000621399 PDFQ9HBH1 243 aa18.93■□□□□ 0.62
CIRBP-245ENST00000621399 UBA2Q9UBT2 640 aaPredicted RBP18.93■□□□□ 0.62
CIRBP-245ENST00000621399 FARP1Q9Y4F1 1045 aaPredicted RBP18.93■□□□□ 0.62
CIRBP-245ENST00000621399 MUC22E2RYF6 1773 aaPredicted RBP18.93■□□□□ 0.62
CIRBP-245ENST00000621399 TMCC1O94876 653 aa18.92■□□□□ 0.62
CIRBP-245ENST00000621399 ACADMP11310 421 aa18.92■□□□□ 0.62
CIRBP-245ENST00000621399 TFDP2Q14188 446 aa18.92■□□□□ 0.62
CIRBP-245ENST00000621399 ZNF776Q68DI1 518 aaPredicted RBP18.92■□□□□ 0.62
CIRBP-245ENST00000621399 ZC3H14Q6PJT7 736 aaKnown RBP18.92■□□□□ 0.62
CIRBP-245ENST00000621399 LRRC49Q8IUZ0 686 aa18.92■□□□□ 0.62
CIRBP-245ENST00000621399 PCDH20Q8N6Y1 951 aaKnown RBP18.92■□□□□ 0.62
CIRBP-245ENST00000621399 PLD5Q8N7P1 536 aa18.92■□□□□ 0.62
CIRBP-245ENST00000621399 OR2A12Q8NGT7 310 aa18.92■□□□□ 0.62
CIRBP-245ENST00000621399 OR8D1Q8WZ84 308 aa18.92■□□□□ 0.62
CIRBP-245ENST00000621399 ALG3Q92685 438 aa18.92■□□□□ 0.62
CIRBP-245ENST00000621399 ISG20Q96AZ6 181 aaKnown RBP18.92■□□□□ 0.62
CIRBP-245ENST00000621399 FAM129BQ96TA1 746 aa18.92■□□□□ 0.62
CIRBP-245ENST00000621399 HEY1Q9Y5J3 304 aa18.92■□□□□ 0.62
CIRBP-245ENST00000621399 R4GN57 208 aa18.92■□□□□ 0.62
CIRBP-245ENST00000621399 MCF2LO15068 1137 aa18.91■□□□□ 0.62
CIRBP-245ENST00000621399 MAFKO60675 156 aa18.91■□□□□ 0.62
CIRBP-245ENST00000621399 CST8O60676 142 aa18.91■□□□□ 0.62
CIRBP-245ENST00000621399 ZNF821O75541 412 aaPredicted RBP18.91■□□□□ 0.62
CIRBP-245ENST00000621399 MAP3K6O95382 1288 aa18.91■□□□□ 0.62
CIRBP-245ENST00000621399 DNTTP04053 509 aa18.91■□□□□ 0.62
CIRBP-245ENST00000621399 MX2P20592 715 aa18.91■□□□□ 0.62
CIRBP-245ENST00000621399 CNR2P34972 360 aa18.91■□□□□ 0.62
CIRBP-245ENST00000621399 CETN2P41208 172 aa18.91■□□□□ 0.62
CIRBP-245ENST00000621399 COPS2P61201 443 aa18.91■□□□□ 0.62
CIRBP-245ENST00000621399 RHOAP61586 193 aa18.91■□□□□ 0.62
CIRBP-245ENST00000621399 RPS14P62263 151 aaKnown RBP18.91■□□□□ 0.62
CIRBP-245ENST00000621399 GALNT2Q10471 571 aa18.91■□□□□ 0.62
CIRBP-245ENST00000621399 CYTH1Q15438 398 aa18.91■□□□□ 0.62
CIRBP-245ENST00000621399 CARD16Q5EG05 197 aa18.91■□□□□ 0.62
CIRBP-245ENST00000621399 DSG4Q86SJ6 1040 aa18.91■□□□□ 0.62
CIRBP-245ENST00000621399 MMAAQ8IVH4 418 aaKnown RBP18.91■□□□□ 0.62
CIRBP-245ENST00000621399 RYBPQ8N488 228 aaPredicted RBP18.91■□□□□ 0.62
CIRBP-245ENST00000621399 TRIM58Q8NG06 486 aa18.91■□□□□ 0.62
CIRBP-245ENST00000621399 UBE2Q2Q8WVN8 375 aa18.91■□□□□ 0.62
CIRBP-245ENST00000621399 HES6Q96HZ4 224 aa18.91■□□□□ 0.62
CIRBP-245ENST00000621399 HEMGNQ9BXL5 484 aa18.91■□□□□ 0.62
CIRBP-245ENST00000621399 TM6SF2Q9BZW4 377 aa18.91■□□□□ 0.62
CIRBP-245ENST00000621399 TRMT1Q9NXH9 659 aaKnown RBP18.91■□□□□ 0.62
CIRBP-245ENST00000621399 DTLQ9NZJ0 730 aa18.91■□□□□ 0.62
CIRBP-245ENST00000621399 INVSQ9Y283 1065 aa18.91■□□□□ 0.62
CIRBP-245ENST00000621399 hCG_1818297A0A087WSY0 165 aa18.9■□□□□ 0.62
CIRBP-245ENST00000621399 ALOX15BO15296 676 aa18.9■□□□□ 0.62
CIRBP-245ENST00000621399 DDX3YO15523 660 aaKnown RBP18.9■□□□□ 0.62
CIRBP-245ENST00000621399 HRO43593 1189 aa18.9■□□□□ 0.62
CIRBP-245ENST00000621399 ZNF217O75362 1048 aa18.9■□□□□ 0.62
CIRBP-245ENST00000621399 RPP40O75818 363 aaKnown RBP18.9■□□□□ 0.62
CIRBP-245ENST00000621399 IL1BP01584 269 aa18.9■□□□□ 0.62
CIRBP-245ENST00000621399 PYGMP11217 842 aa18.9■□□□□ 0.62
CIRBP-245ENST00000621399 GARSP41250 739 aaKnown RBP18.9■□□□□ 0.62
CIRBP-245ENST00000621399 ZBTB16Q05516 673 aa18.9■□□□□ 0.62
CIRBP-245ENST00000621399 SLC10A2Q12908 348 aaPredicted RBP18.9■□□□□ 0.62
CIRBP-245ENST00000621399 SRSF5Q13243 272 aaKnown RBP18.9■□□□□ 0.62
CIRBP-245ENST00000621399 BYSLQ13895 437 aaKnown RBP18.9■□□□□ 0.62
CIRBP-245ENST00000621399 CST6Q15828 149 aa18.9■□□□□ 0.62
CIRBP-245ENST00000621399 PPP2R5EQ16537 467 aa18.9■□□□□ 0.62
CIRBP-245ENST00000621399 DPY19L3Q6ZPD9 716 aa18.9■□□□□ 0.62
CIRBP-245ENST00000621399 REXO1L1PQ8IX06 675 aa18.9■□□□□ 0.62
CIRBP-245ENST00000621399 NSMCE1Q8WV22 266 aa18.9■□□□□ 0.62
CIRBP-245ENST00000621399 RLN3Q8WXF3 142 aa18.9■□□□□ 0.62
CIRBP-245ENST00000621399 ZNF599Q96NL3 588 aa18.9■□□□□ 0.62
CIRBP-245ENST00000621399 ITM2CQ9NQX7 267 aa18.9■□□□□ 0.62
CIRBP-245ENST00000621399 FAM86C1Q9NVL1 165 aa18.9■□□□□ 0.62
CIRBP-245ENST00000621399 LILRB5O75023 590 aa18.89■□□□□ 0.61
CIRBP-245ENST00000621399 GSRP00390 522 aa18.89■□□□□ 0.61
CIRBP-245ENST00000621399 CHRNA3P32297 505 aa18.89■□□□□ 0.61
CIRBP-245ENST00000621399 PSMD8P48556 350 aa18.89■□□□□ 0.61
CIRBP-245ENST00000621399 SNRPD1P62314 119 aaKnown RBP18.89■□□□□ 0.61
CIRBP-245ENST00000621399 ZNF211Q13398 564 aaPredicted RBP18.89■□□□□ 0.61
CIRBP-245ENST00000621399 RFTN1Q14699 578 aaPredicted RBP18.89■□□□□ 0.61
CIRBP-245ENST00000621399 LBRQ14739 615 aaKnown RBP18.89■□□□□ 0.61
CIRBP-245ENST00000621399 RPS6KA1Q15418 735 aa18.89■□□□□ 0.61
CIRBP-245ENST00000621399 TMCO4Q5TGY1 634 aa18.89■□□□□ 0.61
CIRBP-245ENST00000621399 MEI1Q5TIA1 1274 aa18.89■□□□□ 0.61
CIRBP-245ENST00000621399 NPNTQ6UXI9 565 aa18.89■□□□□ 0.61
CIRBP-245ENST00000621399 PLPP6Q8IY26 295 aa18.89■□□□□ 0.61
CIRBP-245ENST00000621399 CHST14Q8NCH0 376 aa18.89■□□□□ 0.61
CIRBP-245ENST00000621399 CCNYQ8ND76 341 aa18.89■□□□□ 0.61
CIRBP-245ENST00000621399 OR2AP1Q8NGE2 309 aa18.89■□□□□ 0.61
CIRBP-245ENST00000621399 GANCQ8TET4 914 aa18.89■□□□□ 0.61
CIRBP-245ENST00000621399 GAB3Q8WWW8 586 aa18.89■□□□□ 0.61
CIRBP-245ENST00000621399 SPACA7Q96KW9 195 aa18.89■□□□□ 0.61
CIRBP-245ENST00000621399 CINPQ9BW66 212 aaPredicted RBP18.89■□□□□ 0.61
CIRBP-245ENST00000621399 HECAQ9UBI9 543 aaPredicted RBP18.89■□□□□ 0.61
CIRBP-245ENST00000621399 PPM1HQ9ULR3 514 aa18.89■□□□□ 0.61
CIRBP-245ENST00000621399 PYCARDQ9ULZ3 195 aa18.89■□□□□ 0.61
CIRBP-245ENST00000621399 CYP8B1Q9UNU6 501 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms