RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 DAAM2Q86T65 1068 aa18.63■□□□□ 0.57
LITAF-220ENST00000620789 NETO2Q8NC67 525 aa18.63■□□□□ 0.57
LITAF-220ENST00000620789 PCDH19Q8TAB3 1148 aa18.63■□□□□ 0.57
LITAF-220ENST00000620789 RAPGEF5Q92565 580 aa18.63■□□□□ 0.57
LITAF-220ENST00000620789 FAF2Q96CS3 445 aa18.63■□□□□ 0.57
LITAF-220ENST00000620789 PABPC3Q9H361 631 aaKnown RBP18.63■□□□□ 0.57
LITAF-220ENST00000620789 PDFQ9HBH1 243 aa18.63■□□□□ 0.57
LITAF-220ENST00000620789 WSB2Q9NYS7 404 aaPredicted RBP18.63■□□□□ 0.57
LITAF-220ENST00000620789 FARP1Q9Y4F1 1045 aaPredicted RBP18.63■□□□□ 0.57
LITAF-220ENST00000620789 SPAG17Q6Q759 2223 aa18.63■□□□□ 0.57
LITAF-220ENST00000620789 GPR179Q6PRD1 2367 aa18.63■□□□□ 0.57
LITAF-220ENST00000620789 LRRD1A4D1F6 860 aa18.62■□□□□ 0.57
LITAF-220ENST00000620789 J3KR12 359 aa18.62■□□□□ 0.57
LITAF-220ENST00000620789 MID1O15344 667 aa18.62■□□□□ 0.57
LITAF-220ENST00000620789 PSTPIP1O43586 416 aa18.62■□□□□ 0.57
LITAF-220ENST00000620789 GFRA3O60609 400 aa18.62■□□□□ 0.57
LITAF-220ENST00000620789 PRAMEF11O60813 436 aa18.62■□□□□ 0.57
LITAF-220ENST00000620789 KRT1P04264 644 aa18.62■□□□□ 0.57
LITAF-220ENST00000620789 TNNT1P13805 278 aa18.62■□□□□ 0.57
LITAF-220ENST00000620789 SLC8A1P32418 973 aa18.62■□□□□ 0.57
LITAF-220ENST00000620789 RECQLP46063 649 aaPredicted RBP18.62■□□□□ 0.57
LITAF-220ENST00000620789 NAP1L1P55209 391 aaKnown RBP18.62■□□□□ 0.57
LITAF-220ENST00000620789 RPL6Q02878 288 aaKnown RBP18.62■□□□□ 0.57
LITAF-220ENST00000620789 SFSWAPQ12872 951 aaKnown RBP18.62■□□□□ 0.57
LITAF-220ENST00000620789 SPDYCQ5MJ68 293 aa18.62■□□□□ 0.57
LITAF-220ENST00000620789 USP30Q70CQ3 517 aa18.62■□□□□ 0.57
LITAF-220ENST00000620789 LPCAT2Q7L5N7 544 aa18.62■□□□□ 0.57
LITAF-220ENST00000620789 VSIG1Q86XK7 387 aa18.62■□□□□ 0.57
LITAF-220ENST00000620789 TP53INP2Q8IXH6 220 aa18.62■□□□□ 0.57
LITAF-220ENST00000620789 TOE1Q96GM8 510 aaKnown RBP18.62■□□□□ 0.57
LITAF-220ENST00000620789 LOXL4Q96JB6 756 aa18.62■□□□□ 0.57
LITAF-220ENST00000620789 DDX56Q9NY93 547 aaKnown RBP18.62■□□□□ 0.57
LITAF-220ENST00000620789 NCDNQ9UBB6 729 aa18.62■□□□□ 0.57
LITAF-220ENST00000620789 GMEB2Q9UKD1 530 aa18.62■□□□□ 0.57
LITAF-220ENST00000620789 PPM1HQ9ULR3 514 aa18.62■□□□□ 0.57
LITAF-220ENST00000620789 ADGRG1Q9Y653 693 aa18.62■□□□□ 0.57
LITAF-220ENST00000620789 NUP205Q92621 2012 aa18.62■□□□□ 0.57
LITAF-220ENST00000620789 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.61■□□□□ 0.57
LITAF-220ENST00000620789 A0A0U1RQJ8 604 aa18.61■□□□□ 0.57
LITAF-220ENST00000620789 C3orf70A6NLC5 250 aaPredicted RBP18.61■□□□□ 0.57
LITAF-220ENST00000620789 ZNF487B1APH4 448 aa18.61■□□□□ 0.57
LITAF-220ENST00000620789 TMCC1O94876 653 aa18.61■□□□□ 0.57
LITAF-220ENST00000620789 RETP07949 1114 aa18.61■□□□□ 0.57
LITAF-220ENST00000620789 C5AR1P21730 350 aa18.61■□□□□ 0.57
LITAF-220ENST00000620789 CHRNA3P32297 505 aa18.61■□□□□ 0.57
LITAF-220ENST00000620789 DNA2P51530 1060 aa18.61■□□□□ 0.57
LITAF-220ENST00000620789 PAFAH1B3Q15102 231 aaKnown RBP18.61■□□□□ 0.57
LITAF-220ENST00000620789 CARD16Q5EG05 197 aa18.61■□□□□ 0.57
LITAF-220ENST00000620789 FAM46CQ5VWP2 391 aa18.61■□□□□ 0.57
LITAF-220ENST00000620789 NCBP2-AS2Q69YL0 99 aa18.61■□□□□ 0.57
LITAF-220ENST00000620789 DPY19L3Q6ZPD9 716 aa18.61■□□□□ 0.57
LITAF-220ENST00000620789 ARHGAP36Q6ZRI8 547 aa18.61■□□□□ 0.57
LITAF-220ENST00000620789 FAM124AQ86V42 546 aa18.61■□□□□ 0.57
LITAF-220ENST00000620789 PLPP6Q8IY26 295 aa18.61■□□□□ 0.57
LITAF-220ENST00000620789 TMEFF1Q8IYR6 380 aa18.61■□□□□ 0.57
LITAF-220ENST00000620789 RUBCNQ92622 972 aa18.61■□□□□ 0.57
LITAF-220ENST00000620789 TM6SF2Q9BZW4 377 aa18.61■□□□□ 0.57
LITAF-220ENST00000620789 FBXL12Q9NXK8 326 aa18.61■□□□□ 0.57
LITAF-220ENST00000620789 UBA2Q9UBT2 640 aaPredicted RBP18.61■□□□□ 0.57
LITAF-220ENST00000620789 IPO11Q9UI26 975 aaKnown RBP18.61■□□□□ 0.57
LITAF-220ENST00000620789 SARDHQ9UL12 918 aa18.61■□□□□ 0.57
LITAF-220ENST00000620789 NCKAP1Q9Y2A7 1128 aa18.61■□□□□ 0.57
LITAF-220ENST00000620789 OTOGLQ3ZCN5 2332 aa18.61■□□□□ 0.57
LITAF-220ENST00000620789 PIEZO1Q92508 2521 aa18.6■□□□□ 0.57
LITAF-220ENST00000620789 C1QTNF3-AMACRE9PGA6 284 aa18.6■□□□□ 0.57
LITAF-220ENST00000620789 NDUFS2O75306 463 aa18.6■□□□□ 0.57
LITAF-220ENST00000620789 EPN2O95208 641 aa18.6■□□□□ 0.57
LITAF-220ENST00000620789 GSRP00390 522 aa18.6■□□□□ 0.57
LITAF-220ENST00000620789 CTSLP07711 333 aa18.6■□□□□ 0.57
LITAF-220ENST00000620789 CCNHP51946 323 aaPredicted RBP18.6■□□□□ 0.57
LITAF-220ENST00000620789 CCZ1BP86790 482 aa18.6■□□□□ 0.57
LITAF-220ENST00000620789 CCZ1P86791 482 aaPredicted RBP18.6■□□□□ 0.57
LITAF-220ENST00000620789 IL10RBQ08334 325 aa18.6■□□□□ 0.57
LITAF-220ENST00000620789 IFI16Q16666 785 aaKnown RBP18.6■□□□□ 0.57
LITAF-220ENST00000620789 ODF2Q5BJF6 829 aa18.6■□□□□ 0.57
LITAF-220ENST00000620789 ABCA7Q8IZY2 2146 aa18.6■□□□□ 0.57
LITAF-220ENST00000620789 AADATQ8N5Z0 425 aa18.6■□□□□ 0.57
LITAF-220ENST00000620789 PQLC3Q8N755 202 aa18.6■□□□□ 0.57
LITAF-220ENST00000620789 CHST14Q8NCH0 376 aa18.6■□□□□ 0.57
LITAF-220ENST00000620789 TMIEQ8NEW7 156 aa18.6■□□□□ 0.57
LITAF-220ENST00000620789 OR2AP1Q8NGE2 309 aa18.6■□□□□ 0.57
LITAF-220ENST00000620789 PIP4K2CQ8TBX8 421 aa18.6■□□□□ 0.57
LITAF-220ENST00000620789 GANCQ8TET4 914 aa18.6■□□□□ 0.57
LITAF-220ENST00000620789 RNF157Q96PX1 679 aa18.6■□□□□ 0.57
LITAF-220ENST00000620789 SP110Q9HB58 689 aa18.6■□□□□ 0.57
LITAF-220ENST00000620789 TRIM10Q9UDY6 481 aa18.6■□□□□ 0.57
LITAF-220ENST00000620789 SERGEFQ9UGK8 458 aa18.6■□□□□ 0.57
LITAF-220ENST00000620789 IL36AQ9UHA7 158 aa18.6■□□□□ 0.57
LITAF-220ENST00000620789 THADAQ6YHU6 1953 aa18.6■□□□□ 0.57
LITAF-220ENST00000620789 A0A1W2PP55 124 aa18.59■□□□□ 0.57
LITAF-220ENST00000620789 MACROD2A1Z1Q3 448 aa18.59■□□□□ 0.57
LITAF-220ENST00000620789 NRDCO43847 1150 aa18.59■□□□□ 0.57
LITAF-220ENST00000620789 MFSD11O43934 449 aa18.59■□□□□ 0.57
LITAF-220ENST00000620789 RNASEH2AO75792 299 aaKnown RBP18.59■□□□□ 0.57
LITAF-220ENST00000620789 PRNPP04156 253 aa18.59■□□□□ 0.57
LITAF-220ENST00000620789 ACSL1P33121 698 aa18.59■□□□□ 0.57
LITAF-220ENST00000620789 DHPSP49366 369 aaPredicted RBP18.59■□□□□ 0.57
LITAF-220ENST00000620789 METAP1P53582 386 aa18.59■□□□□ 0.57
LITAF-220ENST00000620789 RHOAP61586 193 aa18.59■□□□□ 0.57
LITAF-220ENST00000620789 SNRPD1P62314 119 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms