RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 GSPT2Q8IYD1 628 aaKnown RBP12.29□□□□□ -0.44
SRRT-216ENST00000618262 NAT8LQ8N9F0 302 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 CCDC197Q8NCU1 140 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 AENQ8WTP8 325 aaKnown RBP12.29□□□□□ -0.44
SRRT-216ENST00000618262 IQCDQ96DY2 449 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 PIWIL1Q96J94 861 aaKnown RBP12.29□□□□□ -0.44
SRRT-216ENST00000618262 RUNDC3BQ96NL0 473 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 UCKL1Q9NWZ5 548 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 LTBP2Q14767 1821 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 OR6C65A6NJZ3 312 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 SYCE1LA8MT33 242 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 A8MUI8 341 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 E9PBE3 544 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 PMM2O15305 246 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 PIP5K1CO60331 668 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 GREM1O60565 184 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 NDUFA10O95299 355 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 FTLP02792 175 aaPredicted RBP12.29□□□□□ -0.44
SRRT-216ENST00000618262 HEXBP07686 556 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 KRT17Q04695 432 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 TRAP1Q12931 704 aaKnown RBP12.29□□□□□ -0.44
SRRT-216ENST00000618262 PSMD5Q16401 504 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 CMTR2Q8IYT2 770 aaKnown RBP12.29□□□□□ -0.44
SRRT-216ENST00000618262 TBC1D21Q8IYX1 336 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 BBS5Q8N3I7 341 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 SCAMP5Q8TAC9 235 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 CALML6Q8TD86 181 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 E2F7Q96AV8 911 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 DACT3Q96B18 629 aaPredicted RBP12.29□□□□□ -0.44
SRRT-216ENST00000618262 PANX2Q96RD6 677 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 SECISBP2Q96T21 854 aaKnown RBP12.29□□□□□ -0.44
SRRT-216ENST00000618262 CCDC106Q9BWC9 280 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 LACRTQ9GZZ8 138 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 VPS11Q9H270 941 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 C8orf33Q9H7E9 229 aaPredicted RBP12.29□□□□□ -0.44
SRRT-216ENST00000618262 REXO2Q9Y3B8 237 aaKnown RBP12.29□□□□□ -0.44
SRRT-216ENST00000618262 USP34Q70CQ2 3546 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 SYNJ2BP-COX16A0A087WUM0 186 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 SYNDIG1LA6NDD5 238 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 F8VP50 259 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 GOLGA8RI6L899 631 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 SNX4O95219 450 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 CHEK2O96017 543 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 LAG3P18627 525 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 ATF6P18850 670 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 IL10P22301 178 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 IDUAP35475 653 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 BMPR1AP36894 532 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 GRIK1P39086 918 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 PTPN5P54829 565 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 CDK18Q07002 472 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 ZNF423Q2M1K9 1284 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 USP41Q3LFD5 358 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 SHEQ5VZ18 495 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 ALKBH5Q6P6C2 394 aaKnown RBP12.28□□□□□ -0.44
SRRT-216ENST00000618262 ANGPTL8Q6UXH0 198 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 GPRIN1Q7Z2K8 1008 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 MAMDC2Q7Z304 686 aaPredicted RBP12.28□□□□□ -0.44
SRRT-216ENST00000618262 STRA8Q7Z7C7 330 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 CCDC33Q8N5R6 958 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 FBXO22Q8NEZ5 403 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 DDX1Q92499 740 aaKnown RBP12.28□□□□□ -0.44
SRRT-216ENST00000618262 CMTM3Q96MX0 182 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 THAP2Q9H0W7 228 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 MRPL39Q9NYK5 338 aaKnown RBP12.28□□□□□ -0.44
SRRT-216ENST00000618262 COX16Q9P0S2 106 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 GUCA1BQ9UMX6 200 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 COL4A6Q14031 1691 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 SCAMP3O14828 347 aaKnown RBP12.28□□□□□ -0.44
SRRT-216ENST00000618262 KRT75O95678 551 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 PABPC1P11940 636 aaKnown RBP12.28□□□□□ -0.44
SRRT-216ENST00000618262 EPB42P16452 691 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 PPP2R2BQ00005 443 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 SSPNQ14714 243 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 OASLQ15646 514 aaKnown RBP12.28□□□□□ -0.44
SRRT-216ENST00000618262 WSCD2Q2TBF2 565 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 PMF1Q6P1K2 205 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 CROCCP3Q8IVE0 287 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 ZBED8Q8IZ13 594 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 NUP93Q8N1F7 819 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 THEM5Q8N1Q8 247 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 RIBC1Q8N443 379 aaPredicted RBP12.28□□□□□ -0.44
SRRT-216ENST00000618262 WDTC1Q8N5D0 677 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 TOP6BLQ8N6T0 577 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 GATA6Q92908 595 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 DNAJC1Q96KC8 554 aaKnown RBP12.28□□□□□ -0.44
SRRT-216ENST00000618262 NAPGQ99747 312 aaPredicted RBP12.28□□□□□ -0.44
SRRT-216ENST00000618262 DHRS9Q9BPW9 319 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 SLITRK6Q9H5Y7 841 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 VTI1BQ9UEU0 232 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 STK38LQ9Y2H1 464 aa12.28□□□□□ -0.44
SRRT-216ENST00000618262 WDR27A2RRH5 827 aa12.27□□□□□ -0.44
SRRT-216ENST00000618262 M0QZQ0 153 aa12.27□□□□□ -0.44
SRRT-216ENST00000618262 TK2O00142 265 aa12.27□□□□□ -0.44
SRRT-216ENST00000618262 URODP06132 367 aa12.27□□□□□ -0.44
SRRT-216ENST00000618262 CNPP09543 421 aaKnown RBP12.27□□□□□ -0.44
SRRT-216ENST00000618262 GSSP48637 474 aa12.27□□□□□ -0.44
SRRT-216ENST00000618262 CDR2Q01850 454 aa12.27□□□□□ -0.44
SRRT-216ENST00000618262 GALNT1Q10472 559 aaPredicted RBP12.27□□□□□ -0.44
SRRT-216ENST00000618262 ZNF569Q5MCW4 686 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms