RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 DEFB118Q96PH6 123 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 CEP44Q9C0F1 390 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 SETD4Q9NVD3 440 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 ARMCX1Q9P291 453 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 ARL5AQ9Y689 179 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 GSC2O15499 205 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 ATG4CQ96DT6 458 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 TARS2Q9BW92 718 aaKnown RBP12.79□□□□□ -0.36
TCF4-248ENST00000616053 TAS2R13Q9NYV9 303 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 DMGDHQ9UI17 866 aaKnown RBP12.79□□□□□ -0.36
TCF4-248ENST00000616053 FBXW2Q9UKT8 454 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 TELO2Q9Y4R8 837 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 KDM5DQ9BY66 1539 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 NMT2O60551 498 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 CABYRO75952 493 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 CBX2Q14781 532 aaPredicted RBP12.79□□□□□ -0.36
TCF4-248ENST00000616053 ZNF792Q3KQV3 632 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 DNAJC14Q6Y2X3 702 aaPredicted RBP12.79□□□□□ -0.36
TCF4-248ENST00000616053 C1orf216Q8TAB5 229 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 SAMD4AQ9UPU9 718 aaKnown RBP12.79□□□□□ -0.36
TCF4-248ENST00000616053 USP15Q9Y4E8 981 aaPredicted RBP12.79□□□□□ -0.36
TCF4-248ENST00000616053 NESP48681 1621 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 FBXO39Q8N4B4 442 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 ZNF579Q8NAF0 562 aaKnown RBP12.79□□□□□ -0.36
TCF4-248ENST00000616053 CCDC115Q96NT0 180 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 DCUN1D5Q9BTE7 237 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 NRDE2Q9H7Z3 1164 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 DUSP10Q9Y6W6 482 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 PRXQ9BXM0 1461 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 COL17A1Q9UMD9 1497 aaPredicted RBP12.79□□□□□ -0.36
TCF4-248ENST00000616053 CHL1O00533 1208 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 ATP5C1P36542 298 aaKnown RBP12.79□□□□□ -0.36
TCF4-248ENST00000616053 RIDAP52758 137 aaKnown RBP12.79□□□□□ -0.36
TCF4-248ENST00000616053 CHAF1BQ13112 559 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 SLC25A25Q6KCM7 469 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 FRMD5Q7Z6J6 570 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 PPP1R13LQ8WUF5 828 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 E2F7Q96AV8 911 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 MFSD3Q96ES6 412 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 UBXN10Q96LJ8 280 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 ASF1AQ9Y294 204 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 NPHP3-ACAD11A0A0J9YXS1 232 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 TRIM49BA6NDI0 452 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 SCAMP3O14828 347 aaKnown RBP12.79□□□□□ -0.36
TCF4-248ENST00000616053 MED26O95402 600 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 IRF2P14316 349 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 NUP54Q7Z3B4 507 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 SERPINB11Q96P15 392 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 MTMR9Q96QG7 549 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 SLC39A8Q9C0K1 460 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 S100A6P06703 90 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 KLRC1P26715 233 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 ZNF155Q12901 538 aaPredicted RBP12.78□□□□□ -0.36
TCF4-248ENST00000616053 SP140Q13342 867 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 CUL2Q13617 745 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 INTS11Q5TA45 600 aaKnown RBP12.78□□□□□ -0.36
TCF4-248ENST00000616053 LONP2Q86WA8 852 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 SVOPQ8N4V2 548 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 C11orf65Q8NCR3 313 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 KLHL32Q96NJ5 620 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 ZNF717Q9BY31 904 aaPredicted RBP12.78□□□□□ -0.36
TCF4-248ENST00000616053 SNX13Q9Y5W8 968 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 TAS2R41P59536 307 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 DDHD1Q8NEL9 900 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 TSTD1Q8NFU3 115 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 SNX33Q8WV41 574 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 NSL1Q96IY1 281 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 GMNCA6NCL1 334 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 MAP3K6O95382 1288 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 KLK3P07288 261 aaPredicted RBP12.78□□□□□ -0.36
TCF4-248ENST00000616053 PRKG2Q13237 762 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 CRTC3Q6UUV7 619 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.78□□□□□ -0.36
TCF4-248ENST00000616053 TRAPPC11Q7Z392 1133 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 USP38Q8NB14 1042 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 ATP13A3Q9H7F0 1226 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 PHPT1Q9NRX4 125 aaPredicted RBP12.78□□□□□ -0.36
TCF4-248ENST00000616053 APEX2Q9UBZ4 518 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 EDARQ9UNE0 448 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 TNPO3Q9Y5L0 923 aaKnown RBP12.78□□□□□ -0.36
TCF4-248ENST00000616053 CCDC154A6NI56 674 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 CAPN14A8MX76 684 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 FAM227AF5H4B4 570 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 SASH3O75995 380 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 FTH1P02794 183 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 SLC1A2P43004 574 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 PSMD8P48556 350 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 MFSD10Q14728 455 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 DPCR1Q3MIW9 517 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 BROXQ5VW32 411 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 METTL6Q8TCB7 284 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 FRS2Q8WU20 508 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 SEPHS2Q99611 448 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 PVALEFA0A1B0GWK0 134 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 TRIM49D1C9J1S8 452 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 S100A3P33764 101 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 MPP2Q14168 576 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 POU6F1Q14863 301 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 PAPD7Q5XG87 772 aaKnown RBP12.78□□□□□ -0.36
TCF4-248ENST00000616053 CHERPQ8IWX8 916 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms