RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 PGM5Q15124 567 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 PFKFB4Q16877 469 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 FGD3Q5JSP0 725 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 CACTIN-AS1Q8N1I8 211 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 KCTD4Q8WVF5 259 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 OSBPL6Q9BZF3 934 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 RPRD1BQ9NQG5 326 aaKnown RBP19.09■□□□□ 0.65
SPAST-203ENST00000615843 AVILO75366 819 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 OR1G1P47890 313 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 SLC7A2P52569 658 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 SLCO6A1Q86UG4 719 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 VPS45Q9NRW7 570 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 CCDC166P0CW27 439 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 ZNF143P52747 638 aaPredicted RBP19.09■□□□□ 0.65
SPAST-203ENST00000615843 QPRTQ15274 297 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 PCID2Q5JVF3 399 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 MFSD4BQ5TF39 518 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 HIPK1Q86Z02 1210 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 C7orf26Q96N11 449 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 NPAS2Q99743 824 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 OMDQ99983 421 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 SNX15Q9NRS6 342 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 VAV3Q9UKW4 847 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 B3GAT3O94766 335 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 VTNP04004 478 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 YBX3P16989 372 aaKnown RBP eCLIP19.09■□□□□ 0.65
SPAST-203ENST00000615843 RPL7AP62424 266 aaKnown RBP19.09■□□□□ 0.65
SPAST-203ENST00000615843 FAM187BQ17R55 369 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 BTBD9Q96Q07 612 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 KLHL1Q9NR64 748 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 CRYL1Q9Y2S2 319 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 FADS3Q9Y5Q0 445 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 MATN2O00339 956 aa19.08■□□□□ 0.65
SPAST-203ENST00000615843 TIPRLO75663 272 aa19.08■□□□□ 0.65
SPAST-203ENST00000615843 GJA8P48165 433 aa19.08■□□□□ 0.65
SPAST-203ENST00000615843 NOMO3P69849 1222 aa19.08■□□□□ 0.65
SPAST-203ENST00000615843 ZNF621Q6ZSS3 439 aa19.08■□□□□ 0.65
SPAST-203ENST00000615843 SATL1Q86VE3 508 aa19.08■□□□□ 0.65
SPAST-203ENST00000615843 MAB21L3Q8N8X9 362 aa19.08■□□□□ 0.65
SPAST-203ENST00000615843 MYDGFQ969H8 173 aa19.08■□□□□ 0.65
SPAST-203ENST00000615843 ZDHHC15Q96MV8 337 aa19.08■□□□□ 0.65
SPAST-203ENST00000615843 PRDM16Q9HAZ2 1276 aa19.08■□□□□ 0.65
SPAST-203ENST00000615843 POLE3Q9NRF9 147 aa19.08■□□□□ 0.65
SPAST-203ENST00000615843 LGALS13Q9UHV8 139 aa19.08■□□□□ 0.65
SPAST-203ENST00000615843 CNPP09543 421 aaKnown RBP19.08■□□□□ 0.65
SPAST-203ENST00000615843 SCNN1BP51168 640 aa19.08■□□□□ 0.65
SPAST-203ENST00000615843 CNPY1Q3B7I2 92 aa19.08■□□□□ 0.65
SPAST-203ENST00000615843 SLC44A1Q8WWI5 657 aa19.08■□□□□ 0.65
SPAST-203ENST00000615843 MIEF1Q9NQG6 463 aa19.08■□□□□ 0.65
SPAST-203ENST00000615843 KCNQ5Q9NR82 932 aa19.08■□□□□ 0.65
SPAST-203ENST00000615843 MORF4L1Q9UBU8 362 aa19.08■□□□□ 0.65
SPAST-203ENST00000615843 DOLKQ9UPQ8 538 aa19.08■□□□□ 0.65
SPAST-203ENST00000615843 DDTLA6NHG4 134 aaPredicted RBP19.08■□□□□ 0.64
SPAST-203ENST00000615843 ATP6V1G1O75348 118 aa19.08■□□□□ 0.64
SPAST-203ENST00000615843 CYP3A4P08684 503 aa19.08■□□□□ 0.64
SPAST-203ENST00000615843 ATP12AP54707 1039 aa19.08■□□□□ 0.64
SPAST-203ENST00000615843 NIPA1Q7RTP0 329 aa19.08■□□□□ 0.64
SPAST-203ENST00000615843 PTGR2Q8N8N7 351 aaPredicted RBP19.08■□□□□ 0.64
SPAST-203ENST00000615843 LRRC57Q8N9N7 239 aa19.08■□□□□ 0.64
SPAST-203ENST00000615843 CIB1Q99828 191 aa19.08■□□□□ 0.64
SPAST-203ENST00000615843 FDXACB1Q9BRP7 624 aaPredicted RBP19.08■□□□□ 0.64
SPAST-203ENST00000615843 EGFL7Q9UHF1 273 aa19.08■□□□□ 0.64
SPAST-203ENST00000615843 ATF5Q9Y2D1 282 aaPredicted RBP19.08■□□□□ 0.64
SPAST-203ENST00000615843 SH3BP1Q9Y3L3 701 aa19.08■□□□□ 0.64
SPAST-203ENST00000615843 PACS1Q6VY07 963 aa19.08■□□□□ 0.64
SPAST-203ENST00000615843 RTL3Q8N8U3 475 aaKnown RBP19.08■□□□□ 0.64
SPAST-203ENST00000615843 HSD3B7Q9H2F3 369 aa19.08■□□□□ 0.64
SPAST-203ENST00000615843 SCAF8Q9UPN6 1271 aaKnown RBP19.08■□□□□ 0.64
SPAST-203ENST00000615843 GSTK1Q9Y2Q3 226 aa19.08■□□□□ 0.64
SPAST-203ENST00000615843 ITGB6P18564 788 aa19.08■□□□□ 0.64
SPAST-203ENST00000615843 EFEMP1Q12805 493 aa19.08■□□□□ 0.64
SPAST-203ENST00000615843 IKBIPQ70UQ0 350 aa19.08■□□□□ 0.64
SPAST-203ENST00000615843 LZTR1Q8N653 840 aa19.08■□□□□ 0.64
SPAST-203ENST00000615843 LPCAT1Q8NF37 534 aa19.08■□□□□ 0.64
SPAST-203ENST00000615843 NARS2Q96I59 477 aaKnown RBP19.08■□□□□ 0.64
SPAST-203ENST00000615843 DYRK1BQ9Y463 629 aa19.08■□□□□ 0.64
SPAST-203ENST00000615843 WASF2Q9Y6W5 498 aa19.08■□□□□ 0.64
SPAST-203ENST00000615843 CST1P01037 141 aa19.07■□□□□ 0.64
SPAST-203ENST00000615843 PEX2P28328 305 aa19.07■□□□□ 0.64
SPAST-203ENST00000615843 DSG3P32926 999 aa19.07■□□□□ 0.64
SPAST-203ENST00000615843 LHX1P48742 406 aa19.07■□□□□ 0.64
SPAST-203ENST00000615843 HERC6Q8IVU3 1022 aa19.07■□□□□ 0.64
SPAST-203ENST00000615843 FBXO32Q969P5 355 aa19.07■□□□□ 0.64
SPAST-203ENST00000615843 MRPL57Q9BQC6 102 aaKnown RBP19.07■□□□□ 0.64
SPAST-203ENST00000615843 RBMX2Q9Y388 322 aaKnown RBP19.07■□□□□ 0.64
SPAST-203ENST00000615843 PABPC1P11940 636 aaKnown RBP19.07■□□□□ 0.64
SPAST-203ENST00000615843 SRP54P61011 504 aaKnown RBP19.07■□□□□ 0.64
SPAST-203ENST00000615843 GTF2BQ00403 316 aa19.07■□□□□ 0.64
SPAST-203ENST00000615843 BMT2Q1RMZ1 405 aa19.07■□□□□ 0.64
SPAST-203ENST00000615843 ZNF284Q2VY69 593 aa19.07■□□□□ 0.64
SPAST-203ENST00000615843 EML3Q32P44 896 aa19.07■□□□□ 0.64
SPAST-203ENST00000615843 ADAM32Q8TC27 787 aa19.07■□□□□ 0.64
SPAST-203ENST00000615843 UCMAQ8WVF2 138 aa19.07■□□□□ 0.64
SPAST-203ENST00000615843 MRPL48Q96GC5 212 aaKnown RBP19.07■□□□□ 0.64
SPAST-203ENST00000615843 ASB7Q9H672 318 aa19.07■□□□□ 0.64
SPAST-203ENST00000615843 PPP2R1BP30154 601 aa19.07■□□□□ 0.64
SPAST-203ENST00000615843 INTS5Q6P9B9 1019 aaKnown RBP19.07■□□□□ 0.64
SPAST-203ENST00000615843 PARP8Q8N3A8 854 aa19.07■□□□□ 0.64
SPAST-203ENST00000615843 C1orf167Q5SNV9 1468 aa19.07■□□□□ 0.64
SPAST-203ENST00000615843 TCRBV7S2A1N4TA0A589 114 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms