RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 MICALL2Q8IY33 904 aa10.53□□□□□ -0.72
TNFAIP3-208ENST00000615468 CCDC167Q9P0B6 97 aa10.53□□□□□ -0.72
TNFAIP3-208ENST00000615468 ANKMY1Q9P2S6 941 aa10.53□□□□□ -0.72
TNFAIP3-208ENST00000615468 WDR27A2RRH5 827 aa10.52□□□□□ -0.72
TNFAIP3-208ENST00000615468 HMX2A2RU54 273 aa10.52□□□□□ -0.72
TNFAIP3-208ENST00000615468 GOLGA8CPA6NN73 597 aa10.52□□□□□ -0.72
TNFAIP3-208ENST00000615468 CHADO15335 359 aa10.52□□□□□ -0.72
TNFAIP3-208ENST00000615468 PIGNO95427 931 aa10.52□□□□□ -0.72
TNFAIP3-208ENST00000615468 FYNP06241 537 aa10.52□□□□□ -0.72
TNFAIP3-208ENST00000615468 IL1R2P27930 398 aa10.52□□□□□ -0.72
TNFAIP3-208ENST00000615468 RBL1P28749 1068 aa10.52□□□□□ -0.72
TNFAIP3-208ENST00000615468 ALDH4A1P30038 563 aa10.52□□□□□ -0.72
TNFAIP3-208ENST00000615468 DMP1Q13316 513 aaPredicted RBP10.52□□□□□ -0.72
TNFAIP3-208ENST00000615468 CUL2Q13617 745 aa10.52□□□□□ -0.72
TNFAIP3-208ENST00000615468 OTUD3Q5T2D3 398 aaPredicted RBP10.52□□□□□ -0.72
TNFAIP3-208ENST00000615468 GPAT2Q6NUI2 795 aa10.52□□□□□ -0.72
TNFAIP3-208ENST00000615468 SCARA5Q6ZMJ2 495 aa10.52□□□□□ -0.72
TNFAIP3-208ENST00000615468 ANKRD13BQ86YJ7 626 aa10.52□□□□□ -0.72
TNFAIP3-208ENST00000615468 SAMD3Q8N6K7 520 aa10.52□□□□□ -0.72
TNFAIP3-208ENST00000615468 ASB9Q96DX5 294 aa10.52□□□□□ -0.72
TNFAIP3-208ENST00000615468 PLEKHA5Q9HAU0 1116 aa10.52□□□□□ -0.72
TNFAIP3-208ENST00000615468 MRPL40Q9NQ50 206 aaKnown RBP10.52□□□□□ -0.72
TNFAIP3-208ENST00000615468 ARAP2Q8WZ64 1704 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 HDAC3O15379 428 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 TRIM13O60858 407 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 ALDOAP04075 364 aaKnown RBP10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 PRKCHP24723 683 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 ADORA2AP29274 412 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 IFNA8P32881 189 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 GARSP41250 739 aaKnown RBP10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 GRM5P41594 1212 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 GRIA1P42261 906 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 GMPSP49915 693 aaPredicted RBP10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 HNRNPFP52597 415 aaKnown RBP10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 KCNJ11Q14654 390 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 DGKDQ16760 1214 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 INAVAQ3KP66 663 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 NHSL2Q5HYW2 709 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 SIAH1Q8IUQ4 282 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 ZNF486Q96H40 463 aaPredicted RBP10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 SH3YL1Q96HL8 342 aaPredicted RBP10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 IFT80Q9P2H3 777 aaPredicted RBP10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 ARIH1Q9Y4X5 557 aaPredicted RBP10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 PCDHB12Q9Y5F1 795 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 RREB1Q92766 1687 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 TAF1LQ8IZX4 1826 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 MT-CO1P00395 513 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 NCAM1P13591 858 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 HDCP19113 662 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 MMP8P22894 467 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 POLR2BP30876 1174 aaKnown RBP10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 GNL1P36915 607 aaPredicted RBP10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 GLRBP48167 497 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 CCT8P50990 548 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 MLLT10P55197 1068 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 SOX10P56693 466 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 BCAR1P56945 870 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 AGKQ53H12 422 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 THNSL1Q8IYQ7 743 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 PTCD2Q8WV60 388 aaKnown RBP10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 WDR12Q9GZL7 423 aaKnown RBP10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 NEK6Q9HC98 313 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 CYP26B1Q9NR63 512 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 EGFL7Q9UHF1 273 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 TBX20Q9UMR3 447 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 B3GNT3Q9Y2A9 372 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 COQ4Q9Y3A0 265 aa10.52□□□□□ -0.73
TNFAIP3-208ENST00000615468 UNCXA6NJT0 531 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 ACOT8O14734 319 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 PSMD10O75832 226 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 MT-ND1P03886 318 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 SLC7A1P30825 629 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 POC5Q8NA72 575 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 RAB2BQ8WUD1 216 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 GLMNQ92990 594 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 BHMTQ93088 406 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 EBNA1BP2Q99848 306 aaKnown RBP10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 IDI2Q9BXS1 227 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 NANOGQ9H9S0 305 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 RAVER2Q9HCJ3 691 aaKnown RBP10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 MYOZ2Q9NPC6 264 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 DUS2Q9NX74 493 aaKnown RBP10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 GTSE1Q9NYZ3 720 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 NYAP2Q9P242 653 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 UBR3Q6ZT12 1888 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 H0YJX3 145 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 NADKO95544 446 aaPredicted RBP10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 PRKACBP22694 351 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 CCND2P30279 289 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 NAGLUP54802 743 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 SMU1Q2TAY7 513 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 AGAP7PQ5VUJ5 663 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 CAND1Q86VP6 1230 aaKnown RBP10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 GPD1LQ8N335 351 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 ELMOD1Q8N336 334 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 JOSD2Q8TAC2 188 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 CITED4Q96RK1 184 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 ACO2Q99798 780 aaKnown RBP10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 SLC39A3Q9BRY0 314 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms