RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 PPIL6Q8IXY8 311 aa13.31□□□□□ -0.28
FOXN3-219ENST00000615335 DCP1BQ8IZD4 617 aaKnown RBP13.31□□□□□ -0.28
FOXN3-219ENST00000615335 MARVELD2Q8N4S9 558 aa13.31□□□□□ -0.28
FOXN3-219ENST00000615335 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.31□□□□□ -0.28
FOXN3-219ENST00000615335 EFHD2Q96C19 240 aaPredicted RBP13.31□□□□□ -0.28
FOXN3-219ENST00000615335 MAK16Q9BXY0 300 aaKnown RBP13.31□□□□□ -0.28
FOXN3-219ENST00000615335 GBA3Q9H227 469 aa13.31□□□□□ -0.28
FOXN3-219ENST00000615335 FARP1Q9Y4F1 1045 aaPredicted RBP13.31□□□□□ -0.28
FOXN3-219ENST00000615335 LINC01553A4QN01 128 aa13.31□□□□□ -0.28
FOXN3-219ENST00000615335 OR6C75A6NL08 312 aa13.31□□□□□ -0.28
FOXN3-219ENST00000615335 C3orf70A6NLC5 250 aaPredicted RBP13.31□□□□□ -0.28
FOXN3-219ENST00000615335 PEX1O43933 1283 aa13.31□□□□□ -0.28
FOXN3-219ENST00000615335 CPB1P15086 417 aa13.31□□□□□ -0.28
FOXN3-219ENST00000615335 DNAJB2P25686 324 aa13.31□□□□□ -0.28
FOXN3-219ENST00000615335 CTNNB1P35222 781 aa13.31□□□□□ -0.28
FOXN3-219ENST00000615335 RGS7P49802 495 aa13.31□□□□□ -0.28
FOXN3-219ENST00000615335 NUP107P57740 925 aa13.31□□□□□ -0.28
FOXN3-219ENST00000615335 TUBA4AP68366 448 aa13.31□□□□□ -0.28
FOXN3-219ENST00000615335 OTUD4Q01804 1114 aaKnown RBP13.31□□□□□ -0.28
FOXN3-219ENST00000615335 PDAP1Q13442 181 aaKnown RBP13.31□□□□□ -0.28
FOXN3-219ENST00000615335 OTOAQ7RTW8 1153 aa13.31□□□□□ -0.28
FOXN3-219ENST00000615335 FAM35AQ86V20 835 aa13.31□□□□□ -0.28
FOXN3-219ENST00000615335 SPATA2LQ8IUW3 424 aaPredicted RBP13.31□□□□□ -0.28
FOXN3-219ENST00000615335 TTC13Q8NBP0 860 aa13.31□□□□□ -0.28
FOXN3-219ENST00000615335 ACTL9Q8TC94 416 aa13.31□□□□□ -0.28
FOXN3-219ENST00000615335 CPXM1Q96SM3 734 aa13.31□□□□□ -0.28
FOXN3-219ENST00000615335 PKMYT1Q99640 499 aa13.31□□□□□ -0.28
FOXN3-219ENST00000615335 GDF15Q99988 308 aa13.31□□□□□ -0.28
FOXN3-219ENST00000615335 HEPHQ9BQS7 1158 aa13.31□□□□□ -0.28
FOXN3-219ENST00000615335 DUSP16Q9BY84 665 aa13.31□□□□□ -0.28
FOXN3-219ENST00000615335 ADAM33Q9BZ11 813 aa13.31□□□□□ -0.28
FOXN3-219ENST00000615335 FRMD8P1Q9BZ68 369 aaPredicted RBP13.31□□□□□ -0.28
FOXN3-219ENST00000615335 OSBPL6Q9BZF3 934 aa13.31□□□□□ -0.28
FOXN3-219ENST00000615335 RABGEF1Q9UJ41 708 aa13.31□□□□□ -0.28
FOXN3-219ENST00000615335 STRIP2Q9ULQ0 834 aa13.31□□□□□ -0.28
FOXN3-219ENST00000615335 MTO1Q9Y2Z2 717 aaKnown RBP13.31□□□□□ -0.28
FOXN3-219ENST00000615335 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.3□□□□□ -0.28
FOXN3-219ENST00000615335 PIK3R2O00459 728 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 TM7SF2O76062 418 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 TNFAIP8O95379 198 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 KRT7P08729 469 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 NPR3P17342 541 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 HOXD11P31277 338 aaPredicted RBP13.3□□□□□ -0.28
FOXN3-219ENST00000615335 BMPR1AP36894 532 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 GLUD2P49448 558 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 NR1H2P55055 460 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 MAP3K7CLP57077 242 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 TGFBIQ15582 683 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 PSMD5Q16401 504 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 HADHQ16836 314 aaKnown RBP13.3□□□□□ -0.28
FOXN3-219ENST00000615335 MYLK3Q32MK0 819 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 PTPN20Q4JDL3 420 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 DNAL1Q4LDG9 190 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 PMF1Q6P1K2 205 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 LVRNQ6Q4G3 990 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 RSPO2Q6UXX9 243 aaPredicted RBP13.3□□□□□ -0.28
FOXN3-219ENST00000615335 SLC35F5Q8WV83 523 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 PGLYRP2Q96PD5 576 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 RHOBTB2Q9BYZ6 727 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 SSU72Q9NP77 194 aaKnown RBP13.3□□□□□ -0.28
FOXN3-219ENST00000615335 NPHS2Q9NP85 383 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 SAE1Q9UBE0 346 aaPredicted RBP13.3□□□□□ -0.28
FOXN3-219ENST00000615335 FETUBQ9UGM5 382 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 PADI4Q9UM07 663 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 CDY1Q9Y6F8 540 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.3□□□□□ -0.28
FOXN3-219ENST00000615335 CLUHO75153 1309 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 CST8O60676 142 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 ADAM23O75077 832 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 BEST1O76090 585 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 URODP06132 367 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 CA3P07451 260 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 KRT3P12035 628 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 RPL17P18621 184 aaKnown RBP13.3□□□□□ -0.28
FOXN3-219ENST00000615335 KRT4P19013 534 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 BDNFP23560 247 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 SSTR1P30872 391 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 RFC1P35251 1148 aaPredicted RBP13.3□□□□□ -0.28
FOXN3-219ENST00000615335 SMTNL2Q2TAL5 461 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 ANKRD22Q5VYY1 191 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 AHI1Q8N157 1196 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 FBXO22Q8NEZ5 403 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 RSAD2Q8WXG1 361 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 CPT1BQ92523 772 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 ZNF75CPQ92670 426 aaPredicted RBP13.3□□□□□ -0.28
FOXN3-219ENST00000615335 SMARCD1Q96GM5 515 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 ZNF696Q9H7X3 374 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 C10orf88Q9H8K7 445 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 ATAD3AQ9NVI7 634 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 ABI2Q9NYB9 513 aaPredicted RBP13.3□□□□□ -0.28
FOXN3-219ENST00000615335 TJP2Q9UDY2 1190 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 LZTS1Q9Y250 596 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 NLRC5Q86WI3 1866 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 GBF1Q92538 1859 aa13.3□□□□□ -0.28
FOXN3-219ENST00000615335 A0A088AWK7 358 aa13.29□□□□□ -0.28
FOXN3-219ENST00000615335 DENRO43583 198 aaKnown RBP13.29□□□□□ -0.28
FOXN3-219ENST00000615335 PCSK6P29122 969 aa13.29□□□□□ -0.28
FOXN3-219ENST00000615335 GDF10P55107 478 aa13.29□□□□□ -0.28
FOXN3-219ENST00000615335 SLC25A11Q02978 314 aaKnown RBP13.29□□□□□ -0.28
FOXN3-219ENST00000615335 GAD2Q05329 585 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms