RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 CCDC78A2IDD5 438 aa19.45■□□□□ 0.7
MMP28-204ENST00000615136 ERI2A8K979 691 aaKnown RBP19.45■□□□□ 0.7
MMP28-204ENST00000615136 J3KR12 359 aa19.45■□□□□ 0.7
MMP28-204ENST00000615136 POLBP06746 335 aa19.45■□□□□ 0.7
MMP28-204ENST00000615136 DEFB103AP81534 67 aa19.45■□□□□ 0.7
MMP28-204ENST00000615136 CDK18Q07002 472 aa19.45■□□□□ 0.7
MMP28-204ENST00000615136 STXBP5Q5T5C0 1151 aa19.45■□□□□ 0.7
MMP28-204ENST00000615136 CES4AQ5XG92 561 aa19.45■□□□□ 0.7
MMP28-204ENST00000615136 CNKSR3Q6P9H4 555 aa19.45■□□□□ 0.7
MMP28-204ENST00000615136 PACS1Q6VY07 963 aa19.45■□□□□ 0.7
MMP28-204ENST00000615136 TMEM135Q86UB9 458 aa19.45■□□□□ 0.7
MMP28-204ENST00000615136 LONP2Q86WA8 852 aa19.45■□□□□ 0.7
MMP28-204ENST00000615136 KLHDC8BQ8IXV7 354 aa19.45■□□□□ 0.7
MMP28-204ENST00000615136 CDKL2Q92772 493 aa19.45■□□□□ 0.7
MMP28-204ENST00000615136 CERS2Q96G23 380 aa19.45■□□□□ 0.7
MMP28-204ENST00000615136 BTN2A3PQ96KV6 586 aa19.45■□□□□ 0.7
MMP28-204ENST00000615136 ZYG11BQ9C0D3 744 aa19.45■□□□□ 0.7
MMP28-204ENST00000615136 GLOD4Q9HC38 313 aa19.45■□□□□ 0.7
MMP28-204ENST00000615136 TMEM39AQ9NV64 488 aa19.45■□□□□ 0.7
MMP28-204ENST00000615136 RBM22Q9NW64 420 aaKnown RBP eCLIP19.45■□□□□ 0.7
MMP28-204ENST00000615136 KCNK4Q9NYG8 393 aa19.45■□□□□ 0.7
MMP28-204ENST00000615136 ZNF212Q9UDV6 495 aa19.45■□□□□ 0.7
MMP28-204ENST00000615136 IPO11Q9UI26 975 aaKnown RBP19.45■□□□□ 0.7
MMP28-204ENST00000615136 IGLV3-10A0A075B6K4 115 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 BPGMP07738 259 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 MYL2P10916 166 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 PSEN1P49768 467 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 RPL10AP62906 217 aaKnown RBP19.44■□□□□ 0.7
MMP28-204ENST00000615136 TMPRSS15P98073 1019 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 SMARCB1Q12824 385 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 KRT72Q14CN4 511 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 ACCSLQ4AC99 568 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 LRRC40Q9H9A6 602 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 FBXO6Q9NRD1 293 aaPredicted RBP19.44■□□□□ 0.7
MMP28-204ENST00000615136 ARL8BQ9NVJ2 186 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 BFARQ9NZS9 450 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 MYLKQ15746 1914 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 SNNO75324 88 aaPredicted RBP19.44■□□□□ 0.7
MMP28-204ENST00000615136 GJB5O95377 273 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 ANP32DO95626 131 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 RHOQP17081 205 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 GMPRP36959 345 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 CHI3L2Q15782 390 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 KYAT3Q6YP21 454 aaKnown RBP19.44■□□□□ 0.7
MMP28-204ENST00000615136 RASSF3Q86WH2 238 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 NUDCD3Q8IVD9 361 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 UMODL1-AS1Q8N2C9 162 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 ATP6V0D2Q8N8Y2 350 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 C2orf15Q8WU43 125 aaKnown RBP19.44■□□□□ 0.7
MMP28-204ENST00000615136 KLHL5Q96PQ7 755 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 FCRL5Q96RD9 977 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 AGAP2Q99490 1192 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 MIPEPQ99797 713 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 TTLL2Q9BWV7 592 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 OLA1Q9NTK5 396 aaKnown RBP19.44■□□□□ 0.7
MMP28-204ENST00000615136 TMEM248Q9NWD8 314 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 C15orf41Q9Y2V0 281 aa19.44■□□□□ 0.7
MMP28-204ENST00000615136 CCDC22O60826 627 aa19.43■□□□□ 0.7
MMP28-204ENST00000615136 PARNO95453 639 aaKnown RBP19.43■□□□□ 0.7
MMP28-204ENST00000615136 ALDOAP04075 364 aaKnown RBP19.43■□□□□ 0.7
MMP28-204ENST00000615136 NMBRP28336 390 aa19.43■□□□□ 0.7
MMP28-204ENST00000615136 ANKRD20A4Q4UJ75 823 aa19.43■□□□□ 0.7
MMP28-204ENST00000615136 SPANXN3Q5MJ09 141 aa19.43■□□□□ 0.7
MMP28-204ENST00000615136 DENND5AQ6IQ26 1287 aa19.43■□□□□ 0.7
MMP28-204ENST00000615136 TLDC1Q6P9B6 456 aa19.43■□□□□ 0.7
MMP28-204ENST00000615136 KDELC2Q7Z4H8 507 aa19.43■□□□□ 0.7
MMP28-204ENST00000615136 IPMKQ8NFU5 416 aa19.43■□□□□ 0.7
MMP28-204ENST00000615136 AZIN2Q96A70 460 aa19.43■□□□□ 0.7
MMP28-204ENST00000615136 PRR11Q96HE9 360 aaPredicted RBP19.43■□□□□ 0.7
MMP28-204ENST00000615136 UBE2OQ9C0C9 1292 aaKnown RBP19.43■□□□□ 0.7
MMP28-204ENST00000615136 FAM237BA0A1B0GVD1 139 aa19.42■□□□□ 0.7
MMP28-204ENST00000615136 ZBTB16Q05516 673 aa19.42■□□□□ 0.7
MMP28-204ENST00000615136 PRPSAP1Q14558 356 aa19.42■□□□□ 0.7
MMP28-204ENST00000615136 IHHQ14623 411 aa19.42■□□□□ 0.7
MMP28-204ENST00000615136 WASHC2DQ5SRD0 308 aa19.42■□□□□ 0.7
MMP28-204ENST00000615136 ATP2A3Q93084 1043 aa19.42■□□□□ 0.7
MMP28-204ENST00000615136 TOP1MTQ969P6 601 aa19.42■□□□□ 0.7
MMP28-204ENST00000615136 ATXN3LQ9H3M9 355 aa19.42■□□□□ 0.7
MMP28-204ENST00000615136 PPARGC1AQ9UBK2 798 aaKnown RBP19.42■□□□□ 0.7
MMP28-204ENST00000615136 BACE2Q9Y5Z0 518 aa19.42■□□□□ 0.7
MMP28-204ENST00000615136 TTC24A2A3L6 582 aaPredicted RBP19.42■□□□□ 0.7
MMP28-204ENST00000615136 GOLGA8TH3BQL2 631 aa19.42■□□□□ 0.7
MMP28-204ENST00000615136 PEX11AO75192 247 aa19.42■□□□□ 0.7
MMP28-204ENST00000615136 PMPCBO75439 489 aa19.42■□□□□ 0.7
MMP28-204ENST00000615136 HMGA1P17096 107 aaKnown RBP19.42■□□□□ 0.7
MMP28-204ENST00000615136 CALB2P22676 271 aa19.42■□□□□ 0.7
MMP28-204ENST00000615136 ABCG1P45844 678 aa19.42■□□□□ 0.7
MMP28-204ENST00000615136 SLC10A7Q0GE19 358 aa19.42■□□□□ 0.7
MMP28-204ENST00000615136 CDH17Q12864 832 aa19.42■□□□□ 0.7
MMP28-204ENST00000615136 SPOUT1Q5T280 376 aaKnown RBP19.42■□□□□ 0.7
MMP28-204ENST00000615136 NAPEPLDQ6IQ20 393 aa19.42■□□□□ 0.7
MMP28-204ENST00000615136 KIAA1841Q6NSI8 718 aa19.42■□□□□ 0.7
MMP28-204ENST00000615136 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.42■□□□□ 0.7
MMP28-204ENST00000615136 AUTS2Q8WXX7 1259 aa19.42■□□□□ 0.7
MMP28-204ENST00000615136 ZNF689Q96CS4 500 aaPredicted RBP19.42■□□□□ 0.7
MMP28-204ENST00000615136 NSL1Q96IY1 281 aa19.42■□□□□ 0.7
MMP28-204ENST00000615136 RPRD1AQ96P16 312 aaPredicted RBP19.42■□□□□ 0.7
MMP28-204ENST00000615136 TBL1YQ9BQ87 522 aa19.42■□□□□ 0.7
MMP28-204ENST00000615136 FICDQ9BVA6 458 aa19.42■□□□□ 0.7
MMP28-204ENST00000615136 RNPEPL1Q9HAU8 725 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms