RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 CDH18Q13634 790 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 RUNX3Q13761 415 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 DHX34Q14147 1143 aaKnown RBP8.2□□□□□ -1.1
PCDH9-205ENST00000614931 POLD3Q15054 466 aaPredicted RBP8.2□□□□□ -1.1
PCDH9-205ENST00000614931 ELF2Q15723 593 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 ANO4Q32M45 955 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 ITPRIPL2Q3MIP1 535 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 FUT11Q495W5 492 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 DUPD1Q68J44 220 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 ZC3H14Q6PJT7 736 aaKnown RBP8.2□□□□□ -1.1
PCDH9-205ENST00000614931 TXNDC11Q6PKC3 985 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 KIAA0907Q7Z7F0 614 aaPredicted RBP8.2□□□□□ -1.1
PCDH9-205ENST00000614931 SETD3Q86TU7 594 aaPredicted RBP8.2□□□□□ -1.1
PCDH9-205ENST00000614931 SFTPA1Q8IWL2 248 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 ETFBKMTQ8IXQ9 262 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 CCDC13Q8IYE1 715 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 ZNF567Q8N184 647 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 PHTF2Q8N3S3 785 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 CNTD1Q8N815 330 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 ZBTB44Q8NCP5 570 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 CCNYQ8ND76 341 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 FIBINQ8TAL6 211 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 CCDC110Q8TBZ0 833 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 HTR3CQ8WXA8 447 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 CASKIN2Q8WXE0 1202 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 MAML1Q92585 1016 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 TSGA13Q96PP4 275 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 GORASP1Q9BQQ3 440 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 FEM1AQ9BSK4 669 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 ACE2Q9BYF1 805 aaPredicted RBP8.2□□□□□ -1.1
PCDH9-205ENST00000614931 TRIM31Q9BZY9 425 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 MAGEH1Q9H213 219 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 DPH5Q9H2P9 285 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 RETREG1Q9H6L5 497 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 ECT2Q9H8V3 914 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 PCDH9Q9HC56 1237 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 ABCB8Q9NUT2 735 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 SEPT10Q9P0V9 454 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 IPO11Q9UI26 975 aaKnown RBP8.2□□□□□ -1.1
PCDH9-205ENST00000614931 VPS51Q9UID3 782 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 FBXO10Q9UK96 956 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 CKAP5Q14008 2032 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 CACNA1HO95180 2353 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 CACNA1IQ9P0X4 2223 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 TYW5A2RUC4 315 aaKnown RBP8.19□□□□□ -1.1
PCDH9-205ENST00000614931 CFAP69A5D8W1 941 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 RNF103O00237 685 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 MUSKO15146 869 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 TP73O15350 636 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 LILRB5O75023 590 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 NFATC1O95644 943 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 IFNB1P01574 187 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 JCHAINP01591 159 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 LMNAP02545 664 aaKnown RBP8.19□□□□□ -1.1
PCDH9-205ENST00000614931 HLA-DQB2P05538 268 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 CISD3P0C7P0 127 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 MYBL2P10244 700 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 TDGF1P13385 188 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 MX2P20592 715 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 CD68P34810 354 aaPredicted RBP8.19□□□□□ -1.1
PCDH9-205ENST00000614931 OPRD1P41143 372 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 CTSOP43234 321 aaPredicted RBP8.19□□□□□ -1.1
PCDH9-205ENST00000614931 RPL21P46778 160 aaKnown RBP8.19□□□□□ -1.1
PCDH9-205ENST00000614931 PLK1P53350 603 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 IFI35P80217 286 aaPredicted RBP8.19□□□□□ -1.1
PCDH9-205ENST00000614931 ARF5P84085 180 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 IL10RBQ08334 325 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 LRRC32Q14392 662 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 GAS6Q14393 721 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 PDGFRLQ15198 375 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 GEN1Q17RS7 908 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 PLEKHG6Q3KR16 790 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 PARP15Q460N3 678 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 PITRM1Q5JRX3 1037 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 DGKKQ5KSL6 1271 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 C6orf118Q5T5N4 469 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 FAXCQ5TGI0 409 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 TMEM215Q68D42 235 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 HEATR6Q6AI08 1181 aaKnown RBP8.19□□□□□ -1.1
PCDH9-205ENST00000614931 TSSK4Q6SA08 328 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 LINGO4Q6UY18 593 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 BZW1Q7L1Q6 419 aaKnown RBP8.19□□□□□ -1.1
PCDH9-205ENST00000614931 GSPT2Q8IYD1 628 aaKnown RBP8.19□□□□□ -1.1
PCDH9-205ENST00000614931 PGBD5Q8N414 524 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 SPEM1Q8N4L4 309 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 TAB3Q8N5C8 712 aaPredicted RBP8.19□□□□□ -1.1
PCDH9-205ENST00000614931 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.19□□□□□ -1.1
PCDH9-205ENST00000614931 CCDC26Q8TAB7 109 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 GRK7Q8WTQ7 553 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 ATP2A3Q93084 1043 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 NSMCE3Q96MG7 304 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 RUNDC3BQ96NL0 473 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 IL12RB2Q99665 862 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 SPON2Q9BUD6 331 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 FAM126AQ9BYI3 521 aaPredicted RBP8.19□□□□□ -1.1
PCDH9-205ENST00000614931 MUC3BQ9H195 1237 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 NEUROG2Q9H2A3 272 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 ATP13A1Q9HD20 1204 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 ZSCAN32Q9NX65 697 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 GRHL1Q9NZI5 618 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms