RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 CANT1Q8WVQ1 401 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 CASP10Q92851 521 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 C12orf43Q96C57 262 aaKnown RBP11.95□□□□□ -0.5
CDH5-208ENST00000614547 NXNL1Q96CM4 212 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 CSPG4P5Q96PW8 444 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 TBCBQ99426 244 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 PCDH12Q9NPG4 1184 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.95□□□□□ -0.5
CDH5-208ENST00000614547 GPRC5DQ9NZD1 345 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 GMPR2Q9P2T1 348 aaKnown RBP11.95□□□□□ -0.5
CDH5-208ENST00000614547 TRIM17Q9Y577 477 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 SNX5Q9Y5X3 404 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 NAV1Q8NEY1 1877 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 GOLGA4Q13439 2230 aaKnown RBP11.95□□□□□ -0.5
CDH5-208ENST00000614547 C3orf70A6NLC5 250 aaPredicted RBP11.95□□□□□ -0.5
CDH5-208ENST00000614547 C2CD4BA6NLJ0 364 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 TIMM44O43615 452 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 PENKP01210 267 aaPredicted RBP11.95□□□□□ -0.5
CDH5-208ENST00000614547 KCNA2P16389 499 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 CDH2P19022 906 aaPredicted RBP11.95□□□□□ -0.5
CDH5-208ENST00000614547 UGT1A1P22309 533 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 UGT1A4P22310 534 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 CES1P23141 567 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 ALDH4A1P30038 563 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 UGT1A3P35503 534 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 UGT1A5P35504 534 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 SNAPC2Q13487 334 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 MAPRE2Q15555 327 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 MGAT5BQ3V5L5 792 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 C6orf10Q5SRN2 563 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 NANOGNBQ7Z5D8 188 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 LILRA2Q8N149 483 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 EDEM1Q92611 657 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 LPAR1Q92633 364 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 NCLNQ969V3 563 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 DCPSQ96C86 337 aaKnown RBP11.95□□□□□ -0.5
CDH5-208ENST00000614547 ACO2Q99798 780 aaKnown RBP11.95□□□□□ -0.5
CDH5-208ENST00000614547 SLC29A1Q99808 456 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 CCDC68Q9H2F9 335 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 NCKIPSDQ9NZQ3 722 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 GIMAP2Q9UG22 337 aa11.95□□□□□ -0.5
CDH5-208ENST00000614547 LINC00854A0A1B0GVQ3 168 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 CFAP99D6REC4 459 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 GSTA4O15217 222 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 CDH3P22223 829 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 NDST2P52849 883 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 PPP1R8Q12972 351 aaKnown RBP11.94□□□□□ -0.5
CDH5-208ENST00000614547 IMPG1Q17R60 797 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 C6orf183Q5T699 404 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 CATSPER4Q7RTX7 472 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 RDM1Q8NG50 284 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 TRPM4Q8TD43 1214 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 COPS5Q92905 334 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 RNF145Q96MT1 663 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 KLHL32Q96NJ5 620 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 CDT1Q9H211 546 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 ZFYVE28Q9HCC9 887 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 DTLQ9NZJ0 730 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 BARX2Q9UMQ3 279 aaPredicted RBP11.94□□□□□ -0.5
CDH5-208ENST00000614547 CSADQ9Y600 493 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 USP54Q70EL1 1684 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 LRP5O75197 1615 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 UBA6A0AVT1 1052 aaPredicted RBP11.94□□□□□ -0.5
CDH5-208ENST00000614547 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.94□□□□□ -0.5
CDH5-208ENST00000614547 AP3B1O00203 1094 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 CCL22O00626 93 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 TADA2AO75478 443 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 S100BP04271 92 aaPredicted RBP11.94□□□□□ -0.5
CDH5-208ENST00000614547 SMIM18P0DKX4 95 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 NCK1P16333 377 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 FASP25445 335 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 CXCR3P49682 368 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 SP2Q02086 613 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 SFSWAPQ12872 951 aaKnown RBP11.94□□□□□ -0.5
CDH5-208ENST00000614547 SLC10A2Q12908 348 aaPredicted RBP11.94□□□□□ -0.5
CDH5-208ENST00000614547 ZNF618Q5T7W0 954 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 OGFRL1Q5TC84 451 aaPredicted RBP11.94□□□□□ -0.5
CDH5-208ENST00000614547 MAP1SQ66K74 1059 aaPredicted RBP11.94□□□□□ -0.5
CDH5-208ENST00000614547 ZNF470Q6ECI4 717 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 OLFML1Q6UWY5 402 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 PGAM4Q8N0Y7 254 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 MARVELD2Q8N4S9 558 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 PCYOX1LQ8NBM8 494 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 OSBPL11Q9BXB4 747 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 SARS2Q9NP81 518 aaKnown RBP11.94□□□□□ -0.5
CDH5-208ENST00000614547 EMCNQ9ULC0 261 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 ADM5C9JUS6 153 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 NRP1O14786 923 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 CA8P35219 290 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 MPP1Q00013 466 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 ADIGQ0VDE8 80 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 DGCR6Q14129 220 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 GJC2Q5T442 439 aaPredicted RBP11.94□□□□□ -0.5
CDH5-208ENST00000614547 IER5Q5VY09 327 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 FAM219BQ5XKK7 198 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 B3GNT9Q6UX72 402 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 ABHD15Q6UXT9 468 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 STK32CQ86UX6 486 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 NT5DC4Q86YG4 428 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 DENND6AQ8IWF6 608 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms