RNA–Protein interactions for RNA: ENST00000613104.1

ATF3-210, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-210ENST00000613104 TEX26Q8N6G2 289 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 ZNF513Q8N8E2 541 aaPredicted RBP9.48□□□□□ -0.89
ATF3-210ENST00000613104 SLC35B2Q8TB61 432 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 CASKIN2Q8WXE0 1202 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 MAML1Q92585 1016 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 RPL10LQ96L21 214 aaKnown RBP9.48□□□□□ -0.89
ATF3-210ENST00000613104 ZNF599Q96NL3 588 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 QKIQ96PU8 341 aaKnown RBP eCLIP9.48□□□□□ -0.89
ATF3-210ENST00000613104 NAP1L3Q99457 506 aaPredicted RBP9.48□□□□□ -0.89
ATF3-210ENST00000613104 TMEM245Q9H330 911 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 LMAN1LQ9HAT1 526 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 RNF14Q9UBS8 474 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 UBA2Q9UBT2 640 aaPredicted RBP9.48□□□□□ -0.89
ATF3-210ENST00000613104 SLC25A13Q9UJS0 675 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 ACTL7AQ9Y615 435 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 TECTAO75443 2155 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 CKAP5Q14008 2032 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 ATG2BQ96BY7 2078 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 BCLAF3A2AJT9 711 aaKnown RBP9.47□□□□□ -0.89
ATF3-210ENST00000613104 TMEM221A6NGB7 291 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 CHURC1-FNTBB4DL54 471 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 K7ERQ8 282 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 M0R296 226 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 MCF2LO15068 1137 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 MATN3O15232 486 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 LIASO43766 372 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 MT-CO1P00395 513 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 PDGFBP01127 241 aaPredicted RBP9.47□□□□□ -0.89
ATF3-210ENST00000613104 RBP3P10745 1247 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 VAV1P15498 845 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 IL12RB1P42701 662 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 RPS9P46781 194 aaKnown RBP9.47□□□□□ -0.89
ATF3-210ENST00000613104 EMP3P54852 163 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 EIF3EP60228 445 aaKnown RBP9.47□□□□□ -0.89
ATF3-210ENST00000613104 ST8SIA6P61647 398 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 IFI35P80217 286 aaPredicted RBP9.47□□□□□ -0.89
ATF3-210ENST00000613104 HNRNPDQ14103 355 aaKnown RBP9.47□□□□□ -0.89
ATF3-210ENST00000613104 CYTH1Q15438 398 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 CCNG2Q16589 344 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 CYP1B1Q16678 543 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 SLC45A4Q5BKX6 768 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 TMCO4Q5TGY1 634 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 DRICH1Q6PGQ1 229 aaPredicted RBP9.47□□□□□ -0.89
ATF3-210ENST00000613104 LINGO4Q6UY18 593 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 TRMT11Q7Z4G4 463 aaKnown RBP9.47□□□□□ -0.89
ATF3-210ENST00000613104 BMP8AQ7Z5Y6 402 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 ADAT2Q7Z6V5 191 aaKnown RBP9.47□□□□□ -0.89
ATF3-210ENST00000613104 ALYREFQ86V81 257 aaKnown RBP9.47□□□□□ -0.89
ATF3-210ENST00000613104 ZC3H18Q86VM9 953 aaKnown RBP9.47□□□□□ -0.89
ATF3-210ENST00000613104 PRELID2Q8N945 189 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 C12orf50Q8NA57 414 aaPredicted RBP9.47□□□□□ -0.89
ATF3-210ENST00000613104 IL17RCQ8NAC3 791 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 KIF18AQ8NI77 898 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 FRS2Q8WU20 508 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 LRRN4Q8WUT4 740 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 TFB1MQ8WVM0 346 aaKnown RBP9.47□□□□□ -0.89
ATF3-210ENST00000613104 NKD2Q969F2 451 aaPredicted RBP9.47□□□□□ -0.89
ATF3-210ENST00000613104 ISG20Q96AZ6 181 aaKnown RBP9.47□□□□□ -0.89
ATF3-210ENST00000613104 ACOX2Q99424 681 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 PHOX2BQ99453 314 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 LGMNQ99538 433 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 GABRG3Q99928 467 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 FAM118BQ9BPY3 351 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 LRFN3Q9BTN0 628 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 CEP44Q9C0F1 390 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 CHRDQ9H2X0 955 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 SMARCAL1Q9NZC9 954 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 SLCO3A1Q9UIG8 710 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 PLA2G4CQ9UP65 541 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 STON1Q9Y6Q2 735 aa9.47□□□□□ -0.89
ATF3-210ENST00000613104 TTC34A8MYJ7 566 aa9.46□□□□□ -0.9
ATF3-210ENST00000613104 H7C0C1 242 aa9.46□□□□□ -0.9
ATF3-210ENST00000613104 PDE2AO00408 941 aaPredicted RBP9.46□□□□□ -0.9
ATF3-210ENST00000613104 MTSS1O43312 755 aa9.46□□□□□ -0.9
ATF3-210ENST00000613104 SMAD6O43541 496 aaKnown RBP9.46□□□□□ -0.9
ATF3-210ENST00000613104 ADAM23O75077 832 aa9.46□□□□□ -0.9
ATF3-210ENST00000613104 ZNF821O75541 412 aaPredicted RBP9.46□□□□□ -0.9
ATF3-210ENST00000613104 ZNF189O75820 626 aaPredicted RBP9.46□□□□□ -0.9
ATF3-210ENST00000613104 TMCC1O94876 653 aa9.46□□□□□ -0.9
ATF3-210ENST00000613104 AOC1P19801 751 aa9.46□□□□□ -0.9
ATF3-210ENST00000613104 PRKCHP24723 683 aa9.46□□□□□ -0.9
ATF3-210ENST00000613104 RBL1P28749 1068 aa9.46□□□□□ -0.9
ATF3-210ENST00000613104 NTSR1P30989 418 aa9.46□□□□□ -0.9
ATF3-210ENST00000613104 NNMTP40261 264 aa9.46□□□□□ -0.9
ATF3-210ENST00000613104 PAFAH1B1P43034 410 aa9.46□□□□□ -0.9
ATF3-210ENST00000613104 MAGEA9P43362 315 aa9.46□□□□□ -0.9
ATF3-210ENST00000613104 ATP5OP48047 213 aa9.46□□□□□ -0.9
ATF3-210ENST00000613104 SLC10A7Q0GE19 358 aa9.46□□□□□ -0.9
ATF3-210ENST00000613104 AP1B1Q10567 949 aa9.46□□□□□ -0.9
ATF3-210ENST00000613104 TUBB2AQ13885 445 aa9.46□□□□□ -0.9
ATF3-210ENST00000613104 GAS6Q14393 721 aa9.46□□□□□ -0.9
ATF3-210ENST00000613104 LBRQ14739 615 aaKnown RBP9.46□□□□□ -0.9
ATF3-210ENST00000613104 OASLQ15646 514 aaKnown RBP9.46□□□□□ -0.9
ATF3-210ENST00000613104 DLG2Q15700 870 aa9.46□□□□□ -0.9
ATF3-210ENST00000613104 HNRNPA1L2Q32P51 320 aaKnown RBP9.46□□□□□ -0.9
ATF3-210ENST00000613104 FNDC3BQ53EP0 1204 aaKnown RBP9.46□□□□□ -0.9
ATF3-210ENST00000613104 C2orf27AQ580R0 203 aa9.46□□□□□ -0.9
ATF3-210ENST00000613104 C22orf39Q6P5X5 142 aa9.46□□□□□ -0.9
ATF3-210ENST00000613104 PKN3Q6P5Z2 889 aa9.46□□□□□ -0.9
ATF3-210ENST00000613104 LEKR1Q6ZMV7 388 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms