RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 A0A096LPK6 155 aa13.83□□□□□ -0.19
NEK3-205ENST00000610828 FAM92AA1XBS5 289 aa13.83□□□□□ -0.19
NEK3-205ENST00000610828 ITM2AO43736 263 aa13.83□□□□□ -0.19
NEK3-205ENST00000610828 LYPLA1O75608 230 aaPredicted RBP13.83□□□□□ -0.19
NEK3-205ENST00000610828 RHOQP17081 205 aa13.83□□□□□ -0.19
NEK3-205ENST00000610828 SLC1A6P48664 564 aa13.83□□□□□ -0.19
NEK3-205ENST00000610828 CDK7P50613 346 aa13.83□□□□□ -0.19
NEK3-205ENST00000610828 CSE1LP55060 971 aaKnown RBP13.83□□□□□ -0.19
NEK3-205ENST00000610828 DUSP4Q13115 394 aa13.83□□□□□ -0.19
NEK3-205ENST00000610828 GPR17Q13304 367 aa13.83□□□□□ -0.19
NEK3-205ENST00000610828 PCSK7Q16549 785 aa13.83□□□□□ -0.19
NEK3-205ENST00000610828 RASIP1Q5U651 963 aa13.83□□□□□ -0.19
NEK3-205ENST00000610828 RAP1GAP2Q684P5 730 aa13.83□□□□□ -0.19
NEK3-205ENST00000610828 DENND5AQ6IQ26 1287 aa13.83□□□□□ -0.19
NEK3-205ENST00000610828 TMEM173Q86WV6 379 aaPredicted RBP13.83□□□□□ -0.19
NEK3-205ENST00000610828 ZNF683Q8IZ20 524 aa13.83□□□□□ -0.19
NEK3-205ENST00000610828 TNS4Q8IZW8 715 aa13.83□□□□□ -0.19
NEK3-205ENST00000610828 PPHLN1Q8NEY8 458 aaKnown RBP13.83□□□□□ -0.19
NEK3-205ENST00000610828 SPPL2BQ8TCT7 592 aa13.83□□□□□ -0.19
NEK3-205ENST00000610828 BTN2A3PQ96KV6 586 aa13.83□□□□□ -0.19
NEK3-205ENST00000610828 PPP1R2P1Q96PQ5 205 aa13.83□□□□□ -0.19
NEK3-205ENST00000610828 TBC1D10AQ9BXI6 508 aa13.83□□□□□ -0.19
NEK3-205ENST00000610828 NMUR2Q9GZQ4 415 aa13.83□□□□□ -0.19
NEK3-205ENST00000610828 PRDM5Q9NQX1 630 aaPredicted RBP13.83□□□□□ -0.19
NEK3-205ENST00000610828 ARL8BQ9NVJ2 186 aa13.83□□□□□ -0.19
NEK3-205ENST00000610828 SLC12A8A0AV02 714 aa13.83□□□□□ -0.2
NEK3-205ENST00000610828 J3KR12 359 aa13.83□□□□□ -0.2
NEK3-205ENST00000610828 FCHO1O14526 889 aa13.83□□□□□ -0.2
NEK3-205ENST00000610828 VAPBO95292 243 aa13.83□□□□□ -0.2
NEK3-205ENST00000610828 HAPLN1P10915 354 aaPredicted RBP13.83□□□□□ -0.2
NEK3-205ENST00000610828 SAT1P21673 171 aa13.83□□□□□ -0.2
NEK3-205ENST00000610828 ADRA1AP35348 466 aa13.83□□□□□ -0.2
NEK3-205ENST00000610828 PSEN1P49768 467 aa13.83□□□□□ -0.2
NEK3-205ENST00000610828 IRF9Q00978 393 aa13.83□□□□□ -0.2
NEK3-205ENST00000610828 ITKQ08881 620 aa13.83□□□□□ -0.2
NEK3-205ENST00000610828 TRIP4Q15650 581 aaPredicted RBP13.83□□□□□ -0.2
NEK3-205ENST00000610828 TCTN1Q2MV58 587 aa13.83□□□□□ -0.2
NEK3-205ENST00000610828 CCDC153Q494R4 210 aa13.83□□□□□ -0.2
NEK3-205ENST00000610828 HSF5Q4G112 596 aaPredicted RBP13.83□□□□□ -0.2
NEK3-205ENST00000610828 UMODL1-AS1Q8N2C9 162 aa13.83□□□□□ -0.2
NEK3-205ENST00000610828 ACVR1CQ8NER5 493 aa13.83□□□□□ -0.2
NEK3-205ENST00000610828 PABPC5Q96DU9 382 aaKnown RBP13.83□□□□□ -0.2
NEK3-205ENST00000610828 MRGPRX2Q96LB1 330 aa13.83□□□□□ -0.2
NEK3-205ENST00000610828 WWP1Q9H0M0 922 aa13.83□□□□□ -0.2
NEK3-205ENST00000610828 NT5MQ9NPB1 228 aa13.83□□□□□ -0.2
NEK3-205ENST00000610828 OLA1Q9NTK5 396 aaKnown RBP13.83□□□□□ -0.2
NEK3-205ENST00000610828 TMEM248Q9NWD8 314 aa13.83□□□□□ -0.2
NEK3-205ENST00000610828 FNIP2Q9P278 1114 aa13.83□□□□□ -0.2
NEK3-205ENST00000610828 ARMCX1Q9P291 453 aa13.83□□□□□ -0.2
NEK3-205ENST00000610828 SLC39A10Q9ULF5 831 aa13.83□□□□□ -0.2
NEK3-205ENST00000610828 TBKBP1A7MCY6 615 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 VNN2O95498 520 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 MPOP05164 745 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 C2P06681 752 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 PTPN4P29074 926 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 CHRNA4P43681 627 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 RENBPP51606 427 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 NDST2P52849 883 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 MAXP61244 160 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 GRM3Q14832 879 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 ESRP1Q6NXG1 681 aaKnown RBP13.82□□□□□ -0.2
NEK3-205ENST00000610828 FBXL22Q6P050 247 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 POTEHQ6S545 545 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 RAPH1Q70E73 1250 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 TAS1R1Q7RTX1 841 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 NPAS4Q8IUM7 802 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 SH3TC2Q8TF17 1288 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 GIPC2Q8TF65 315 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 IGSF8Q969P0 613 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 KLHL5Q96PQ7 755 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 SP110Q9HB58 689 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 NSMCE4AQ9NXX6 385 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 PPARGC1AQ9UBK2 798 aaKnown RBP13.82□□□□□ -0.2
NEK3-205ENST00000610828 LNPEPQ9UIQ6 1025 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 PQBP1O60828 265 aaKnown RBP13.82□□□□□ -0.2
NEK3-205ENST00000610828 SERPINE1P05121 402 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 GALTP07902 379 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 CPA3P15088 417 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 ITGA9Q13797 1035 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 HNRNPDQ14103 355 aaKnown RBP13.82□□□□□ -0.2
NEK3-205ENST00000610828 SEPT6Q14141 434 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 PRSS55Q6UWB4 352 aaPredicted RBP13.82□□□□□ -0.2
NEK3-205ENST00000610828 LONP2Q86WA8 852 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 CIR1Q86X95 450 aaPredicted RBP13.82□□□□□ -0.2
NEK3-205ENST00000610828 WDR75Q8IWA0 830 aaKnown RBP13.82□□□□□ -0.2
NEK3-205ENST00000610828 PIWIL2Q8TC59 973 aaKnown RBP13.82□□□□□ -0.2
NEK3-205ENST00000610828 PSMG2Q969U7 264 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 SCLYQ96I15 445 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 RILPQ96NA2 401 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 RPRD1AQ96P16 312 aaPredicted RBP13.82□□□□□ -0.2
NEK3-205ENST00000610828 MCMBPQ9BTE3 642 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 CCSER2Q9H7U1 834 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 DONSONQ9NYP3 566 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 SLC2A6Q9UGQ3 507 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 DNAJC16Q9Y2G8 782 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 TCAF1Q9Y4C2 921 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 DOCK4Q8N1I0 1966 aa13.82□□□□□ -0.2
NEK3-205ENST00000610828 TRAFD1O14545 582 aaPredicted RBP13.81□□□□□ -0.2
NEK3-205ENST00000610828 HNRNPCL1O60812 293 aaKnown RBP13.81□□□□□ -0.2
NEK3-205ENST00000610828 PEX11BO96011 259 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms