RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 DLG1Q12959 904 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 LSM12Q3MHD2 195 aaKnown RBP6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 TBCELQ5QJ74 424 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 OTUD3Q5T2D3 398 aaPredicted RBP6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 LIPMQ5VYY2 423 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 STRADAQ7RTN6 431 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 ARHGAP22Q7Z5H3 698 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 LDB1Q86U70 411 aaPredicted RBP6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 SATL1Q86VE3 508 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 DENND6AQ8IWF6 608 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 BHMTQ93088 406 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 DCUN1D1Q96GG9 259 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 VPS50Q96JG6 964 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 RPRD1AQ96P16 312 aaPredicted RBP6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 EGFL8Q99944 293 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 TBL1YQ9BQ87 522 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 TXNRD2Q9NNW7 524 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 NDUFA13Q9P0J0 144 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 LZTS1Q9Y250 596 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 RGPD3A6NKT7 1758 aaPredicted RBP6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 RGPD4Q7Z3J3 1758 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 SCN7AQ01118 1682 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 PDHXO00330 501 aa6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 SH3BP5O60239 455 aa6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 SORBS2O94875 1100 aaKnown RBP6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 ENDOD1O94919 500 aa6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 FBXO21O94952 628 aa6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 ATP5BP06576 529 aaKnown RBP6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 CPB1P15086 417 aa6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 ZNF280AP59817 542 aaPredicted RBP6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 SEMA5AQ13591 1074 aa6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 DPYSL2Q16555 572 aa6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 FBXO48Q5FWF7 155 aa6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 SPOUT1Q5T280 376 aaKnown RBP6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 NCBP2-AS2Q69YL0 99 aa6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 CWF19L1Q69YN2 538 aaKnown RBP6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 LPCAT2Q7L5N7 544 aa6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 ZNF410Q86VK4 478 aa6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 TP53INP2Q8IXH6 220 aa6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 PLD6Q8N2A8 252 aaKnown RBP6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 TSPYL2Q9H2G4 693 aaPredicted RBP6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 MPP6Q9NZW5 540 aa6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 SIRPGQ9P1W8 387 aa6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 FAM8A1Q9UBU6 413 aa6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 AFF4Q9UHB7 1163 aaKnown RBP6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 CROTQ9UKG9 612 aa6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 FBXO5Q9UKT4 447 aa6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 AP4S1Q9Y587 144 aa6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 ARAP2Q8WZ64 1704 aa6.96□□□□□ -1.29
SYNPO2-206ENST00000610556 TRAFD1O14545 582 aaPredicted RBP6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 ABLIM1O14639 778 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 ATG7O95352 703 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 MLNP12872 115 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 VAV1P15498 845 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 ZNF23P17027 643 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 CHRM3P20309 590 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 NFKBIAP25963 317 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 GRIA3P42263 894 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 ETV4P43268 484 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 LIMK2P53671 638 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 EFEMP1Q12805 493 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 NAB1Q13506 487 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 SCIMPQ6UWF3 145 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 LRRC52Q8N7C0 313 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 OR52K2Q8NGK3 314 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 EMID1Q96A84 441 aaPredicted RBP6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 LENG1Q96BZ8 264 aaPredicted RBP6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 C12orf42Q96LP6 360 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 RBBP8Q99708 897 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 DUSP16Q9BY84 665 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 OXCT2Q9BYC2 517 aaPredicted RBP6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 MID1IP1Q9NPA3 183 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 ADARB2Q9NS39 739 aaKnown RBP6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 NDFIP2Q9NV92 336 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 CPA4Q9UI42 421 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 NHSQ6T4R5 1651 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 C17orf102A2RUQ5 167 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 YJEFN3A6XGL0 299 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 KCNU1A8MYU2 1149 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 CABYRO75952 493 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 ALDOAP04075 364 aaKnown RBP6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 IQCF3P0C7M6 154 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 PTPN3P26045 913 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 LRPAP1P30533 357 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 CCNFP41002 786 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 PTPN9P43378 593 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 SCNN1GP51170 649 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 CSE1LP55060 971 aaKnown RBP6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 PPIDQ08752 370 aaKnown RBP6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 TEX44Q53QW1 395 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 SFT2D3Q587I9 215 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 C10orf120Q5SQS8 335 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 ESRP1Q6NXG1 681 aaKnown RBP6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 HFE2Q6ZVN8 426 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 TMEM110Q86TL2 294 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 DHFR2Q86XF0 187 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 RNF168Q8IYW5 571 aaPredicted RBP6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 ANKLE1Q8NAG6 615 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 SLC35F5Q8WV83 523 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 NRG4Q8WWG1 115 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms