RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 ARPP19P56211 112 aa12.76□□□□□ -0.37
CTCFL-218ENST00000608440 NME5P56597 212 aa12.76□□□□□ -0.37
CTCFL-218ENST00000608440 MAP3K7CLP57077 242 aa12.76□□□□□ -0.37
CTCFL-218ENST00000608440 ORC2Q13416 577 aaPredicted RBP12.76□□□□□ -0.37
CTCFL-218ENST00000608440 TTBK2Q6IQ55 1244 aa12.76□□□□□ -0.37
CTCFL-218ENST00000608440 CRTC3Q6UUV7 619 aa12.76□□□□□ -0.37
CTCFL-218ENST00000608440 MAMDC4Q6UXC1 1216 aa12.76□□□□□ -0.37
CTCFL-218ENST00000608440 ARCQ7LC44 396 aa12.76□□□□□ -0.37
CTCFL-218ENST00000608440 GALNT12Q8IXK2 581 aa12.76□□□□□ -0.37
CTCFL-218ENST00000608440 ADGRF2Q8IZF7 708 aa12.76□□□□□ -0.37
CTCFL-218ENST00000608440 MYCT1Q8N699 235 aa12.76□□□□□ -0.37
CTCFL-218ENST00000608440 JPH3Q8WXH2 748 aaPredicted RBP12.76□□□□□ -0.37
CTCFL-218ENST00000608440 DHX38Q92620 1227 aaKnown RBP12.76□□□□□ -0.37
CTCFL-218ENST00000608440 SLCO4A1Q96BD0 722 aa12.76□□□□□ -0.37
CTCFL-218ENST00000608440 NPAS2Q99743 824 aa12.76□□□□□ -0.37
CTCFL-218ENST00000608440 TMEM47Q9BQJ4 181 aa12.76□□□□□ -0.37
CTCFL-218ENST00000608440 WDR55Q9H6Y2 383 aaPredicted RBP12.76□□□□□ -0.37
CTCFL-218ENST00000608440 MKNK2Q9HBH9 465 aa12.76□□□□□ -0.37
CTCFL-218ENST00000608440 PCDH9Q9HC56 1237 aa12.76□□□□□ -0.37
CTCFL-218ENST00000608440 ZNF221Q9UK13 617 aa12.76□□□□□ -0.37
CTCFL-218ENST00000608440 SYNCRIPO60506 623 aaKnown RBP12.75□□□□□ -0.37
CTCFL-218ENST00000608440 TPST1O60507 370 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 KRT1P04264 644 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 ADCY7P51828 1080 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 PPP3CAQ08209 521 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 C19orf57Q0VDD7 668 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 SNX17Q15036 470 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 CDK10Q15131 360 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 HYIQ5T013 277 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 IDO2Q6ZQW0 420 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 PCDH20Q8N6Y1 951 aaKnown RBP12.75□□□□□ -0.37
CTCFL-218ENST00000608440 MAPK15Q8TD08 544 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 KREMEN1Q96MU8 473 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 SORT1Q99523 831 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 DGCR6LQ9BY27 220 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 MKRN2Q9H000 416 aaKnown RBP12.75□□□□□ -0.37
CTCFL-218ENST00000608440 MAT2BQ9NZL9 334 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 E2F8A0AVK6 867 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 DLGAP1O14490 977 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 ZNF195O14628 629 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 GPC4O75487 556 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 PROSCO94903 275 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 VAPBO95292 243 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 ALDH4A1P30038 563 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 FMO4P31512 558 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 HTR2BP41595 481 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 OR3A3P47888 321 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 SLC9A3P48764 834 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 LSM3P62310 102 aaKnown RBP12.75□□□□□ -0.37
CTCFL-218ENST00000608440 FCHO2Q0JRZ9 810 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 GALNT1Q10472 559 aaPredicted RBP12.75□□□□□ -0.37
CTCFL-218ENST00000608440 POU6F1Q14863 301 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 POLD3Q15054 466 aaPredicted RBP12.75□□□□□ -0.37
CTCFL-218ENST00000608440 KIZQ2M2Z5 673 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 ANGEL2Q5VTE6 544 aaKnown RBP12.75□□□□□ -0.37
CTCFL-218ENST00000608440 ABRAXAS1Q6UWZ7 409 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 MAPKAPK5Q8IW41 473 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 TTLL6Q8N841 843 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 CMASQ8NFW8 434 aaPredicted RBP12.75□□□□□ -0.37
CTCFL-218ENST00000608440 GLMNQ92990 594 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 DACT3Q96B18 629 aaPredicted RBP12.75□□□□□ -0.37
CTCFL-218ENST00000608440 ACO2Q99798 780 aaKnown RBP12.75□□□□□ -0.37
CTCFL-218ENST00000608440 TTYH2Q9BSA4 534 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 IDI2Q9BXS1 227 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 GPN2Q9H9Y4 310 aaPredicted RBP12.75□□□□□ -0.37
CTCFL-218ENST00000608440 PAQR5Q9NXK6 330 aaPredicted RBP12.75□□□□□ -0.37
CTCFL-218ENST00000608440 CNOT6Q9ULM6 557 aaKnown RBP12.75□□□□□ -0.37
CTCFL-218ENST00000608440 RGSL1A5PLK6 1076 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 TOMM70O94826 608 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 UGT2B4P06133 528 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 MYL4P12829 197 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 IFI30P13284 250 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 EPHX2P34913 555 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 POLD2P49005 469 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 MMRN1Q13201 1228 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 INSCQ1MX18 579 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 DESI1Q6ICB0 168 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 SPATC1Q76KD6 591 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 C10orf107Q8IVU9 208 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 FAM71AQ8IYT1 594 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 KATNAL2Q8IYT4 538 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 SPARTQ8N0X7 666 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 SNX31Q8N9S9 440 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 SLC44A5Q8NCS7 719 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 CPNE5Q9HCH3 593 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 RPRD1BQ9NQG5 326 aaKnown RBP12.75□□□□□ -0.37
CTCFL-218ENST00000608440 RAB20Q9NX57 234 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 TOR4AQ9NXH8 423 aa12.75□□□□□ -0.37
CTCFL-218ENST00000608440 IFT80Q9P2H3 777 aaPredicted RBP12.75□□□□□ -0.37
CTCFL-218ENST00000608440 IPO11Q9UI26 975 aaKnown RBP12.75□□□□□ -0.37
CTCFL-218ENST00000608440 EIF3LQ9Y262 564 aaKnown RBP12.75□□□□□ -0.37
CTCFL-218ENST00000608440 E7ENX8 843 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 ATP6V1G2-DDX39BF2Z307 99 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 ATICP31939 592 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 RPL22P35268 128 aaKnown RBP12.74□□□□□ -0.37
CTCFL-218ENST00000608440 PLA2G16P53816 162 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 TRIM25Q14258 630 aaKnown RBP12.74□□□□□ -0.37
CTCFL-218ENST00000608440 ATAD3CQ5T2N8 411 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 PCGF5Q86SE9 256 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 PGAM4Q8N0Y7 254 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms