RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 LPCAT2Q7L5N7 544 aa16.32■□□□□ 0.2
PPFIA3-213ENST00000602905 KBTBD6Q86V97 674 aa16.32■□□□□ 0.2
PPFIA3-213ENST00000602905 RYBPQ8N488 228 aaPredicted RBP16.32■□□□□ 0.2
PPFIA3-213ENST00000602905 NSMCE1Q8WV22 266 aa16.32■□□□□ 0.2
PPFIA3-213ENST00000602905 RAPGEF5Q92565 580 aa16.32■□□□□ 0.2
PPFIA3-213ENST00000602905 OMDQ99983 421 aa16.32■□□□□ 0.2
PPFIA3-213ENST00000602905 TNKS2Q9H2K2 1166 aa16.32■□□□□ 0.2
PPFIA3-213ENST00000602905 USP36Q9P275 1121 aaKnown RBP16.32■□□□□ 0.2
PPFIA3-213ENST00000602905 GMEB2Q9UKD1 530 aa16.32■□□□□ 0.2
PPFIA3-213ENST00000602905 FCF1Q9Y324 198 aaKnown RBP16.32■□□□□ 0.2
PPFIA3-213ENST00000602905 IGHV1OR15-9A0A0B4J2B8 117 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 PRAMEF11O60813 436 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 PRNPP04156 253 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 ZFXP17010 805 aaPredicted RBP16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 C5AR1P21730 350 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 IL4RP24394 825 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 CD6P30203 668 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 SLC8A1P32418 973 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 PLA2G5P39877 138 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 TPMTP51580 245 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 RAD51Q06609 339 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 IL10RBQ08334 325 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 CCDC15Q0P6D6 951 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 LPAL2Q16609 132 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 PLK5Q496M5 336 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 LAIR1Q6GTX8 287 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 LEKR1Q6ZMV7 388 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 USP30Q70CQ3 517 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 LRRC49Q8IUZ0 686 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 ARHGAP12Q8IWW6 846 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 BBS5Q8N3I7 341 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 ATPAF2Q8N5M1 289 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 RNF10Q8N5U6 811 aaKnown RBP16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 NPWQ8N729 165 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 PCDH19Q8TAB3 1148 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 RNF25Q96BH1 459 aaPredicted RBP16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 FAF2Q96CS3 445 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 ZC3H10Q96K80 434 aaKnown RBP16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 ZNF830Q96NB3 372 aaPredicted RBP16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 RNF157Q96PX1 679 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 FAM129BQ96TA1 746 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 PHOX2BQ99453 314 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 HINFPQ9BQA5 517 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 KLC2Q9H0B6 622 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 PABPC3Q9H361 631 aaKnown RBP16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 GOLPH3Q9H4A6 298 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 DYRK4Q9NR20 520 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 ETNK2Q9NVF9 386 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 NCDNQ9UBB6 729 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 IPO11Q9UI26 975 aaKnown RBP16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 SALL4Q9UJQ4 1053 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 AMFRQ9UKV5 643 aa16.31■□□□□ 0.2
PPFIA3-213ENST00000602905 MID1O15344 667 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 PALMO75781 387 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 TMCC1O94876 653 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 ZRANB2O95218 330 aaKnown RBP eCLIP16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 IGSF6O95976 241 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 GSRP00390 522 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 BCKDHBP21953 392 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 CHRNA3P32297 505 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 CETN2P41208 172 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 RHOAP61586 193 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 CCZ1BP86790 482 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 CCZ1P86791 482 aaPredicted RBP16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 RPL6Q02878 288 aaKnown RBP16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 RFTN1Q14699 578 aaPredicted RBP16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 PAFAH1B3Q15102 231 aaKnown RBP16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 TMCO4Q5TGY1 634 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 RFX6Q8HWS3 928 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 CCDC50Q8IVM0 306 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 PLPP6Q8IY26 295 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 RCOR2Q8IZ40 523 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 FAM160A2Q8N612 972 aaPredicted RBP16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 OR2A12Q8NGT7 310 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 PIP4K2CQ8TBX8 421 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 PPP1R16AQ96I34 528 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 RBM41Q96IZ5 413 aaKnown RBP16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 LOXL4Q96JB6 756 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 GDAP1L1Q96MZ0 367 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 HEPHQ9BQS7 1158 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 TM6SF2Q9BZW4 377 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 BTBD1Q9H0C5 482 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 FBXL12Q9NXK8 326 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 HECAQ9UBI9 543 aaPredicted RBP16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 IL36AQ9UHA7 158 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 ACTL7AQ9Y615 435 aa16.3■□□□□ 0.2
PPFIA3-213ENST00000602905 CCDC66A2RUB6 948 aa16.29■□□□□ 0.2
PPFIA3-213ENST00000602905 J3KR12 359 aa16.29■□□□□ 0.2
PPFIA3-213ENST00000602905 APOL1O14791 398 aa16.29■□□□□ 0.2
PPFIA3-213ENST00000602905 RNASEH2AO75792 299 aaKnown RBP16.29■□□□□ 0.2
PPFIA3-213ENST00000602905 CD160O95971 181 aa16.29■□□□□ 0.2
PPFIA3-213ENST00000602905 IGLV3-19P01714 112 aa16.29■□□□□ 0.2
PPFIA3-213ENST00000602905 C7P10643 843 aa16.29■□□□□ 0.2
PPFIA3-213ENST00000602905 MX2P20592 715 aa16.29■□□□□ 0.2
PPFIA3-213ENST00000602905 DHPSP49366 369 aaPredicted RBP16.29■□□□□ 0.2
PPFIA3-213ENST00000602905 CCNHP51946 323 aaPredicted RBP16.29■□□□□ 0.2
PPFIA3-213ENST00000602905 TFDP2Q14188 446 aa16.29■□□□□ 0.2
PPFIA3-213ENST00000602905 NUMA1Q14980 2115 aa16.29■□□□□ 0.2
PPFIA3-213ENST00000602905 SPDYCQ5MJ68 293 aa16.29■□□□□ 0.2
PPFIA3-213ENST00000602905 PMS2CLQ68D20 193 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms