RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 ARTNQ5T4W7 220 aa13.45□□□□□ -0.26
RPS28-204ENST00000602140 ACBD5Q5T8D3 534 aaPredicted RBP13.45□□□□□ -0.26
RPS28-204ENST00000602140 TRNP1Q6NT89 227 aa13.45□□□□□ -0.26
RPS28-204ENST00000602140 C22orf39Q6P5X5 142 aa13.45□□□□□ -0.26
RPS28-204ENST00000602140 DPY19L3Q6ZPD9 716 aa13.45□□□□□ -0.26
RPS28-204ENST00000602140 ERN2Q76MJ5 926 aaKnown RBP13.45□□□□□ -0.26
RPS28-204ENST00000602140 NOP9Q86U38 636 aaKnown RBP13.45□□□□□ -0.26
RPS28-204ENST00000602140 HORMAD1Q86X24 394 aa13.45□□□□□ -0.26
RPS28-204ENST00000602140 FAM131BQ86XD5 332 aa13.45□□□□□ -0.26
RPS28-204ENST00000602140 SLC25A45Q8N413 288 aa13.45□□□□□ -0.26
RPS28-204ENST00000602140 CRELD1Q96HD1 420 aa13.45□□□□□ -0.26
RPS28-204ENST00000602140 CFAP57Q96MR6 1250 aa13.45□□□□□ -0.26
RPS28-204ENST00000602140 HAPLN3Q96S86 360 aa13.45□□□□□ -0.26
RPS28-204ENST00000602140 CLSTN2Q9H4D0 955 aa13.45□□□□□ -0.26
RPS28-204ENST00000602140 TMEM51Q9NW97 253 aa13.45□□□□□ -0.26
RPS28-204ENST00000602140 ZFR2Q9UPR6 939 aaKnown RBP13.45□□□□□ -0.26
RPS28-204ENST00000602140 AK5Q9Y6K8 562 aa13.45□□□□□ -0.26
RPS28-204ENST00000602140 URB1O60287 2271 aaKnown RBP13.44□□□□□ -0.26
RPS28-204ENST00000602140 ILVBLA1L0T0 632 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 TRIM38O00635 465 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 LEFTY1O75610 366 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 LSM8O95777 96 aaKnown RBP13.44□□□□□ -0.26
RPS28-204ENST00000602140 MMEP08473 750 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 UCHL3P15374 230 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 HNRNPA2B1P22626 353 aaKnown RBP13.44□□□□□ -0.26
RPS28-204ENST00000602140 DGKAP23743 735 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 ACP1P24666 158 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 ERCC5P28715 1186 aaPredicted RBP13.44□□□□□ -0.26
RPS28-204ENST00000602140 CLDN2P57739 230 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 ZNF211Q13398 564 aaPredicted RBP13.44□□□□□ -0.26
RPS28-204ENST00000602140 NAA35Q5VZE5 725 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 SEL1L3Q68CR1 1132 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 RETSATQ6NUM9 610 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 BNIPLQ7Z465 357 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 MSANTD4Q8NCY6 345 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 OR13H1Q8NG92 308 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 CPA5Q8WXQ8 436 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 PPP1R16AQ96I34 528 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 NAA15Q9BXJ9 866 aaKnown RBP13.44□□□□□ -0.26
RPS28-204ENST00000602140 CALN1Q9BXU9 219 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 HDAC8Q9BY41 377 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 ZYG11BQ9C0D3 744 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 CAAP1Q9H8G2 361 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 ATP13A1Q9HD20 1204 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 KLHL11Q9NVR0 708 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 UCKL1Q9NWZ5 548 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 ZNF212Q9UDV6 495 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 TMEM59LQ9UK28 342 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 DOCK9Q9BZ29 2069 aa13.44□□□□□ -0.26
RPS28-204ENST00000602140 ZNF821O75541 412 aaPredicted RBP13.43□□□□□ -0.26
RPS28-204ENST00000602140 ZMPSTE24O75844 475 aa13.43□□□□□ -0.26
RPS28-204ENST00000602140 ABCG1P45844 678 aa13.43□□□□□ -0.26
RPS28-204ENST00000602140 SERPINH1P50454 418 aaKnown RBP13.43□□□□□ -0.26
RPS28-204ENST00000602140 DNA2P51530 1060 aa13.43□□□□□ -0.26
RPS28-204ENST00000602140 NOMO3P69849 1222 aa13.43□□□□□ -0.26
RPS28-204ENST00000602140 ATP11AP98196 1134 aa13.43□□□□□ -0.26
RPS28-204ENST00000602140 INSM1Q01101 510 aaPredicted RBP13.43□□□□□ -0.26
RPS28-204ENST00000602140 GNA12Q03113 381 aa13.43□□□□□ -0.26
RPS28-204ENST00000602140 RTP5Q14D33 572 aa13.43□□□□□ -0.26
RPS28-204ENST00000602140 ZNF783Q6ZMS7 281 aa13.43□□□□□ -0.26
RPS28-204ENST00000602140 GCNT7Q6ZNI0 430 aa13.43□□□□□ -0.26
RPS28-204ENST00000602140 DRC7Q8IY82 874 aa13.43□□□□□ -0.26
RPS28-204ENST00000602140 EMC1Q8N766 993 aa13.43□□□□□ -0.26
RPS28-204ENST00000602140 OR4C6Q8NH72 309 aa13.43□□□□□ -0.26
RPS28-204ENST00000602140 EPS8L1Q8TE68 723 aa13.43□□□□□ -0.26
RPS28-204ENST00000602140 BBC3Q96PG8 261 aaPredicted RBP13.43□□□□□ -0.26
RPS28-204ENST00000602140 STK33Q9BYT3 514 aa13.43□□□□□ -0.26
RPS28-204ENST00000602140 NRSN2Q9GZP1 204 aa13.43□□□□□ -0.26
RPS28-204ENST00000602140 METTL5Q9NRN9 209 aaKnown RBP13.43□□□□□ -0.26
RPS28-204ENST00000602140 SAMSN1Q9NSI8 373 aaKnown RBP13.43□□□□□ -0.26
RPS28-204ENST00000602140 DACH1Q9UI36 760 aa13.43□□□□□ -0.26
RPS28-204ENST00000602140 CLCA2Q9UQC9 943 aa13.43□□□□□ -0.26
RPS28-204ENST00000602140 WASF2Q9Y6W5 498 aa13.43□□□□□ -0.26
RPS28-204ENST00000602140 F8VZ95 297 aa13.42□□□□□ -0.26
RPS28-204ENST00000602140 FFAR2O15552 330 aa13.42□□□□□ -0.26
RPS28-204ENST00000602140 TLX3O43711 291 aaPredicted RBP13.42□□□□□ -0.26
RPS28-204ENST00000602140 ITPKBP27987 946 aa13.42□□□□□ -0.26
RPS28-204ENST00000602140 NEK3P51956 506 aa13.42□□□□□ -0.26
RPS28-204ENST00000602140 ARF5P84085 180 aa13.42□□□□□ -0.26
RPS28-204ENST00000602140 DAB2P98082 770 aa13.42□□□□□ -0.26
RPS28-204ENST00000602140 SLC20A2Q08357 652 aa13.42□□□□□ -0.26
RPS28-204ENST00000602140 TMEM259Q4ZIN3 620 aa13.42□□□□□ -0.26
RPS28-204ENST00000602140 RAB6CQ53S08 254 aa13.42□□□□□ -0.26
RPS28-204ENST00000602140 HS1BP3Q53T59 392 aa13.42□□□□□ -0.26
RPS28-204ENST00000602140 CARD16Q5EG05 197 aa13.42□□□□□ -0.26
RPS28-204ENST00000602140 TCP11X2Q5H9J9 407 aa13.42□□□□□ -0.26
RPS28-204ENST00000602140 ARCQ7LC44 396 aa13.42□□□□□ -0.26
RPS28-204ENST00000602140 ABI3BPQ7Z7G0 1075 aa13.42□□□□□ -0.26
RPS28-204ENST00000602140 SLC22A18ASQ8N1D0 253 aa13.42□□□□□ -0.26
RPS28-204ENST00000602140 PCDH20Q8N6Y1 951 aaKnown RBP13.42□□□□□ -0.26
RPS28-204ENST00000602140 RFFLQ8WZ73 363 aa13.42□□□□□ -0.26
RPS28-204ENST00000602140 HEPHQ9BQS7 1158 aa13.42□□□□□ -0.26
RPS28-204ENST00000602140 CEP44Q9C0F1 390 aa13.42□□□□□ -0.26
RPS28-204ENST00000602140 RAB6CQ9H0N0 254 aa13.42□□□□□ -0.26
RPS28-204ENST00000602140 FCF1Q9Y324 198 aaKnown RBP13.42□□□□□ -0.26
RPS28-204ENST00000602140 ACTL7AQ9Y615 435 aa13.42□□□□□ -0.26
RPS28-204ENST00000602140 A6NNZ2 444 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 PIAS2O75928 621 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 PAK4O96013 591 aaPredicted RBP13.41□□□□□ -0.26
RPS28-204ENST00000602140 ADRB3P13945 408 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms