RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	OPHN1	O60890	802 aa		15.8	■□□□□ 0.12
PLD3-223	ENST00000600948	RAMP2	O60895	175 aa		15.8	■□□□□ 0.12
PLD3-223	ENST00000600948	TPM3	P06753	285 aa		15.8	■□□□□ 0.12
PLD3-223	ENST00000600948	ADRB1	P08588	477 aa		15.8	■□□□□ 0.12
PLD3-223	ENST00000600948	FAM228B	P0C875	321 aa		15.8	■□□□□ 0.12
PLD3-223	ENST00000600948	CSRP1	P21291	193 aa	Known RBP	15.8	■□□□□ 0.12
PLD3-223	ENST00000600948	CASP14	P31944	242 aa		15.8	■□□□□ 0.12
PLD3-223	ENST00000600948	CSNK1E	P49674	416 aa	Known RBP	15.8	■□□□□ 0.12
PLD3-223	ENST00000600948	CCR5	P51681	352 aa		15.8	■□□□□ 0.12
PLD3-223	ENST00000600948	AFF3	P51826	1226 aa	Known RBP	15.8	■□□□□ 0.12
PLD3-223	ENST00000600948	CNTN1	Q12860	1018 aa		15.8	■□□□□ 0.12
PLD3-223	ENST00000600948	AGBL4	Q5VU57	503 aa		15.8	■□□□□ 0.12
PLD3-223	ENST00000600948	PSAPL1	Q6NUJ1	521 aa		15.8	■□□□□ 0.12
PLD3-223	ENST00000600948	DPY19L3	Q6ZPD9	716 aa		15.8	■□□□□ 0.12
PLD3-223	ENST00000600948	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	15.8	■□□□□ 0.12
PLD3-223	ENST00000600948	PIP4P1	Q86T03	277 aa		15.8	■□□□□ 0.12
PLD3-223	ENST00000600948	VPS36	Q86VN1	386 aa		15.8	■□□□□ 0.12
PLD3-223	ENST00000600948	PCDH20	Q8N6Y1	951 aa	Known RBP	15.8	■□□□□ 0.12
PLD3-223	ENST00000600948	TMIE	Q8NEW7	156 aa		15.8	■□□□□ 0.12
PLD3-223	ENST00000600948	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	15.8	■□□□□ 0.12
PLD3-223	ENST00000600948	SNRNP25	Q9BV90	132 aa	Known RBP	15.8	■□□□□ 0.12
PLD3-223	ENST00000600948	EBF2	Q9HAK2	575 aa		15.8	■□□□□ 0.12
PLD3-223	ENST00000600948	MRPL47	Q9HD33	250 aa	Known RBP	15.8	■□□□□ 0.12
PLD3-223	ENST00000600948	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	15.8	■□□□□ 0.12
PLD3-223	ENST00000600948		A0A1W2PPC4	97 aa		15.79	■□□□□ 0.12
PLD3-223	ENST00000600948	GIPC1	O14908	333 aa		15.79	■□□□□ 0.12
PLD3-223	ENST00000600948	CBFA2T2	O43439	604 aa		15.79	■□□□□ 0.12
PLD3-223	ENST00000600948	PLRG1	O43660	514 aa	Known RBP	15.79	■□□□□ 0.12
PLD3-223	ENST00000600948	RNF8	O76064	485 aa		15.79	■□□□□ 0.12
PLD3-223	ENST00000600948	PRNP	P04156	253 aa		15.79	■□□□□ 0.12
PLD3-223	ENST00000600948	HNRNPH3	P31942	346 aa	Known RBP	15.79	■□□□□ 0.12
PLD3-223	ENST00000600948	HTR7	P34969	479 aa		15.79	■□□□□ 0.12
PLD3-223	ENST00000600948	RECQL	P46063	649 aa	Predicted RBP	15.79	■□□□□ 0.12
PLD3-223	ENST00000600948	GRIA4	P48058	902 aa		15.79	■□□□□ 0.12
PLD3-223	ENST00000600948	NOVA1	P51513	510 aa	Known RBP	15.79	■□□□□ 0.12
PLD3-223	ENST00000600948	PPP2CB	P62714	309 aa		15.79	■□□□□ 0.12
PLD3-223	ENST00000600948	PPP2CA	P67775	309 aa		15.79	■□□□□ 0.12
PLD3-223	ENST00000600948	POLD3	Q15054	466 aa	Predicted RBP	15.79	■□□□□ 0.12
PLD3-223	ENST00000600948	CA9	Q16790	459 aa		15.79	■□□□□ 0.12
PLD3-223	ENST00000600948	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	15.79	■□□□□ 0.12
PLD3-223	ENST00000600948	LAYN	Q6UX15	382 aa		15.79	■□□□□ 0.12
PLD3-223	ENST00000600948	ISG20	Q96AZ6	181 aa	Known RBP	15.79	■□□□□ 0.12
PLD3-223	ENST00000600948	ARRDC3	Q96B67	414 aa		15.79	■□□□□ 0.12
PLD3-223	ENST00000600948	KDM4C	Q9H3R0	1056 aa		15.79	■□□□□ 0.12
PLD3-223	ENST00000600948	CATSPERB	Q9H7T0	1116 aa		15.79	■□□□□ 0.12
PLD3-223	ENST00000600948	ARHGAP20	Q9P2F6	1191 aa		15.79	■□□□□ 0.12
PLD3-223	ENST00000600948	PCSK1N	Q9UHG2	260 aa		15.79	■□□□□ 0.12
PLD3-223	ENST00000600948	FCF1	Q9Y324	198 aa	Known RBP	15.79	■□□□□ 0.12
PLD3-223	ENST00000600948	TRPM6	Q9BX84	2022 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	TBC1D3D	A0A087WVF3	549 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	TBC1D3I	A0A087WXS9	549 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	TBC1D3E	A0A087X179	549 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	TBC1D3K	A0A087X1G2	549 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	TBC1D3F	A6NER0	549 aa	Predicted RBP	15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	EIF3CL	B5ME19	914 aa	Known RBP	15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	TBC1D3L	B9A6J9	549 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	KPNA3	O00505	521 aa	Predicted RBP	15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	FGF10	O15520	208 aa	Predicted RBP	15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	LAT	O43561	262 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	KDELR3	O43731	214 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	LRCH4	O75427	683 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	TBC1D3H	P0C7X1	549 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	CD59	P13987	128 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	MIP	P30301	263 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	CCNH	P51946	323 aa	Predicted RBP	15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	GEMIN4	P57678	1058 aa	Known RBP	15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	YBEY	P58557	167 aa	Predicted RBP	15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	TAS2R38	P59533	333 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	TPI1	P60174	286 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	RACK1	P63244	317 aa	Known RBP	15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	TEAD4	Q15561	434 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	NFKBIB	Q15653	356 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	CARD16	Q5EG05	197 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	ERMARD	Q5T6L9	678 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	PIP5KL1	Q5T9C9	394 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	TBC1D3G	Q6DHY5	549 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	TBC1D3C	Q6IPX1	549 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	TBC1D3	Q8IZP1	549 aa	Predicted RBP	15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	UMODL1-AS1	Q8N2C9	162 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	RNF214	Q8ND24	703 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	DEFB124	Q8NES8	71 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	GRIN3A	Q8TCU5	1115 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	SLC6A18	Q96N87	628 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	KCTD15	Q96SI1	283 aa	Predicted RBP	15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	EIF3C	Q99613	913 aa	Known RBP	15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	KLC2	Q9H0B6	622 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	THAP2	Q9H0W7	228 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	DHX35	Q9H5Z1	703 aa	Known RBP	15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	IL36A	Q9UHA7	158 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	TPX2	Q9ULW0	747 aa	Known RBP	15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	HPCAL4	Q9UM19	191 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	NENF	Q9UMX5	172 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	WASF2	Q9Y6W5	498 aa		15.78	■□□□□ 0.12
PLD3-223	ENST00000600948	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	15.77	■□□□□ 0.12
PLD3-223	ENST00000600948	RASA4B	C9J798	803 aa		15.77	■□□□□ 0.12
PLD3-223	ENST00000600948	RASA4	O43374	803 aa		15.77	■□□□□ 0.12
PLD3-223	ENST00000600948	LEFTY1	O75610	366 aa		15.77	■□□□□ 0.12
PLD3-223	ENST00000600948	CER1	O95813	267 aa		15.77	■□□□□ 0.12
PLD3-223	ENST00000600948	CEACAM1	P13688	526 aa		15.77	■□□□□ 0.12
PLD3-223	ENST00000600948	SLC14A1	Q13336	389 aa		15.77	■□□□□ 0.12

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms