RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 C1orf210Q8IVY1 113 aa22.52■■□□□ 1.2
CHMP2A-204ENST00000597848 TSTD1Q8NFU3 115 aa22.52■■□□□ 1.2
CHMP2A-204ENST00000597848 FRS2Q8WU20 508 aa22.52■■□□□ 1.2
CHMP2A-204ENST00000597848 PBKQ96KB5 322 aa22.52■■□□□ 1.2
CHMP2A-204ENST00000597848 ZNF599Q96NL3 588 aa22.52■■□□□ 1.2
CHMP2A-204ENST00000597848 TSGA13Q96PP4 275 aa22.52■■□□□ 1.2
CHMP2A-204ENST00000597848 HHIPQ96QV1 700 aa22.52■■□□□ 1.2
CHMP2A-204ENST00000597848 LGMNQ99538 433 aa22.52■■□□□ 1.2
CHMP2A-204ENST00000597848 NAPGQ99747 312 aaPredicted RBP22.52■■□□□ 1.2
CHMP2A-204ENST00000597848 CEP44Q9C0F1 390 aa22.52■■□□□ 1.2
CHMP2A-204ENST00000597848 TNKS2Q9H2K2 1166 aa22.52■■□□□ 1.2
CHMP2A-204ENST00000597848 PRSS16Q9NQE7 514 aa22.52■■□□□ 1.2
CHMP2A-204ENST00000597848 TCRBV21S2A2A0A5A6 115 aa22.51■■□□□ 1.19
CHMP2A-204ENST00000597848 TARSL2A2RTX5 802 aaKnown RBP22.51■■□□□ 1.19
CHMP2A-204ENST00000597848 CTAGE9A4FU28 777 aa22.51■■□□□ 1.19
CHMP2A-204ENST00000597848 SIN3BO75182 1162 aa22.51■■□□□ 1.19
CHMP2A-204ENST00000597848 RECQLP46063 649 aaPredicted RBP22.51■■□□□ 1.19
CHMP2A-204ENST00000597848 OTUD4Q01804 1114 aaKnown RBP22.51■■□□□ 1.19
CHMP2A-204ENST00000597848 LBRQ14739 615 aaKnown RBP22.51■■□□□ 1.19
CHMP2A-204ENST00000597848 CYTH1Q15438 398 aa22.51■■□□□ 1.19
CHMP2A-204ENST00000597848 C9orf64Q5T6V5 341 aa22.51■■□□□ 1.19
CHMP2A-204ENST00000597848 TMCO4Q5TGY1 634 aa22.51■■□□□ 1.19
CHMP2A-204ENST00000597848 B4GALNT4Q76KP1 1039 aa22.51■■□□□ 1.19
CHMP2A-204ENST00000597848 CCDC13Q8IYE1 715 aa22.51■■□□□ 1.19
CHMP2A-204ENST00000597848 RYBPQ8N488 228 aaPredicted RBP22.51■■□□□ 1.19
CHMP2A-204ENST00000597848 PCDH20Q8N6Y1 951 aaKnown RBP22.51■■□□□ 1.19
CHMP2A-204ENST00000597848 ACTL9Q8TC94 416 aa22.51■■□□□ 1.19
CHMP2A-204ENST00000597848 PTPRN2Q92932 1015 aa22.51■■□□□ 1.19
CHMP2A-204ENST00000597848 HDAC11Q96DB2 347 aa22.51■■□□□ 1.19
CHMP2A-204ENST00000597848 OLFM3Q96PB7 478 aa22.51■■□□□ 1.19
CHMP2A-204ENST00000597848 CINPQ9BW66 212 aaPredicted RBP22.51■■□□□ 1.19
CHMP2A-204ENST00000597848 TM6SF2Q9BZW4 377 aa22.51■■□□□ 1.19
CHMP2A-204ENST00000597848 BRD8Q9H0E9 1235 aa22.51■■□□□ 1.19
CHMP2A-204ENST00000597848 FARP1Q9Y4F1 1045 aaPredicted RBP22.51■■□□□ 1.19
CHMP2A-204ENST00000597848 ZDBF2Q9HCK1 2354 aa22.5■■□□□ 1.19
CHMP2A-204ENST00000597848 TCRBV7S2A1N4TA0A589 114 aa22.5■■□□□ 1.19
CHMP2A-204ENST00000597848 H7C0C1 242 aa22.5■■□□□ 1.19
CHMP2A-204ENST00000597848 MATN3O15232 486 aa22.5■■□□□ 1.19
CHMP2A-204ENST00000597848 NEBLO76041 1014 aa22.5■■□□□ 1.19
CHMP2A-204ENST00000597848 ALDH1A2O94788 518 aa22.5■■□□□ 1.19
CHMP2A-204ENST00000597848 ATP5OP48047 213 aa22.5■■□□□ 1.19
CHMP2A-204ENST00000597848 RHOAP61586 193 aa22.5■■□□□ 1.19
CHMP2A-204ENST00000597848 PPIDQ08752 370 aaKnown RBP22.5■■□□□ 1.19
CHMP2A-204ENST00000597848 SLC10A7Q0GE19 358 aa22.5■■□□□ 1.19
CHMP2A-204ENST00000597848 CAMK2GQ13555 558 aaPredicted RBP22.5■■□□□ 1.19
CHMP2A-204ENST00000597848 RFTN1Q14699 578 aaPredicted RBP22.5■■□□□ 1.19
CHMP2A-204ENST00000597848 MARC1Q5VT66 337 aa22.5■■□□□ 1.19
CHMP2A-204ENST00000597848 PGBD3Q8N328 593 aa22.5■■□□□ 1.19
CHMP2A-204ENST00000597848 BBS5Q8N3I7 341 aa22.5■■□□□ 1.19
CHMP2A-204ENST00000597848 TTC13Q8NBP0 860 aa22.5■■□□□ 1.19
CHMP2A-204ENST00000597848 TFB1MQ8WVM0 346 aaKnown RBP22.5■■□□□ 1.19
CHMP2A-204ENST00000597848 ISG20Q96AZ6 181 aaKnown RBP22.5■■□□□ 1.19
CHMP2A-204ENST00000597848 CCDC114Q96M63 670 aa22.5■■□□□ 1.19
CHMP2A-204ENST00000597848 OSBPL9Q96SU4 736 aa22.5■■□□□ 1.19
CHMP2A-204ENST00000597848 FAM118BQ9BPY3 351 aa22.5■■□□□ 1.19
CHMP2A-204ENST00000597848 SEPT3Q9UH03 358 aa22.5■■□□□ 1.19
CHMP2A-204ENST00000597848 SNX12Q9UMY4 172 aa22.5■■□□□ 1.19
CHMP2A-204ENST00000597848 CHD5Q8TDI0 1954 aa22.5■■□□□ 1.19
CHMP2A-204ENST00000597848 FGGP02679 453 aa22.49■■□□□ 1.19
CHMP2A-204ENST00000597848 EIF3EP60228 445 aaKnown RBP22.49■■□□□ 1.19
CHMP2A-204ENST00000597848 ETF1P62495 437 aaKnown RBP22.49■■□□□ 1.19
CHMP2A-204ENST00000597848 KLF1Q13351 362 aaPredicted RBP22.49■■□□□ 1.19
CHMP2A-204ENST00000597848 ZNF235Q14590 738 aa22.49■■□□□ 1.19
CHMP2A-204ENST00000597848 NOMO1Q15155 1222 aa22.49■■□□□ 1.19
CHMP2A-204ENST00000597848 LONRF2Q1L5Z9 754 aa22.49■■□□□ 1.19
CHMP2A-204ENST00000597848 CARD16Q5EG05 197 aa22.49■■□□□ 1.19
CHMP2A-204ENST00000597848 STK40Q8N2I9 435 aa22.49■■□□□ 1.19
CHMP2A-204ENST00000597848 OR2T3Q8NH03 318 aa22.49■■□□□ 1.19
CHMP2A-204ENST00000597848 HMGB4Q8WW32 186 aa22.49■■□□□ 1.19
CHMP2A-204ENST00000597848 SEPT10Q9P0V9 454 aa22.49■■□□□ 1.19
CHMP2A-204ENST00000597848 BCCIPQ9P287 314 aaKnown RBP eCLIP22.49■■□□□ 1.19
CHMP2A-204ENST00000597848 CUL9Q8IWT3 2517 aa22.48■■□□□ 1.19
CHMP2A-204ENST00000597848 RNASEH1O60930 286 aaKnown RBP22.48■■□□□ 1.19
CHMP2A-204ENST00000597848 ZNF821O75541 412 aaPredicted RBP22.48■■□□□ 1.19
CHMP2A-204ENST00000597848 APBB3O95704 486 aa22.48■■□□□ 1.19
CHMP2A-204ENST00000597848 PEX11BO96011 259 aa22.48■■□□□ 1.19
CHMP2A-204ENST00000597848 CCNB1P14635 433 aa22.48■■□□□ 1.19
CHMP2A-204ENST00000597848 CASQ1P31415 396 aa22.48■■□□□ 1.19
CHMP2A-204ENST00000597848 MMP13P45452 471 aa22.48■■□□□ 1.19
CHMP2A-204ENST00000597848 RENBPP51606 427 aa22.48■■□□□ 1.19
CHMP2A-204ENST00000597848 SNRPD1P62314 119 aaKnown RBP22.48■■□□□ 1.19
CHMP2A-204ENST00000597848 CSTF1Q05048 431 aaKnown RBP22.48■■□□□ 1.19
CHMP2A-204ENST00000597848 XRCC4Q13426 336 aa22.48■■□□□ 1.19
CHMP2A-204ENST00000597848 ATXN7L2Q5T6C5 722 aaPredicted RBP22.48■■□□□ 1.19
CHMP2A-204ENST00000597848 ANO7Q6IWH7 933 aa22.48■■□□□ 1.19
CHMP2A-204ENST00000597848 TSSK4Q6SA08 328 aa22.48■■□□□ 1.19
CHMP2A-204ENST00000597848 SYT10Q6XYQ8 523 aa22.48■■□□□ 1.19
CHMP2A-204ENST00000597848 CAMKK1Q8N5S9 505 aa22.48■■□□□ 1.19
CHMP2A-204ENST00000597848 OR2A12Q8NGT7 310 aa22.48■■□□□ 1.19
CHMP2A-204ENST00000597848 OR8D1Q8WZ84 308 aa22.48■■□□□ 1.19
CHMP2A-204ENST00000597848 C16orf45Q96MC5 204 aaPredicted RBP22.48■■□□□ 1.19
CHMP2A-204ENST00000597848 HECAQ9UBI9 543 aaPredicted RBP22.48■■□□□ 1.19
CHMP2A-204ENST00000597848 NYNRINQ9P2P1 1898 aaKnown RBP22.47■■□□□ 1.19
CHMP2A-204ENST00000597848 HACD1B0YJ81 288 aa22.47■■□□□ 1.19
CHMP2A-204ENST00000597848 KCNK1O00180 336 aa22.47■■□□□ 1.19
CHMP2A-204ENST00000597848 MCF2LO15068 1137 aa22.47■■□□□ 1.19
CHMP2A-204ENST00000597848 PAPSS2O95340 614 aaPredicted RBP22.47■■□□□ 1.19
CHMP2A-204ENST00000597848 IGSF6O95976 241 aa22.47■■□□□ 1.19
CHMP2A-204ENST00000597848 GSRP00390 522 aa22.47■■□□□ 1.19
CHMP2A-204ENST00000597848 TCP1P17987 556 aaKnown RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms