RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 VAV1P15498 845 aa22.97■■□□□ 1.27
SNRNP70-204ENST00000595231 SLC10A7Q0GE19 358 aa22.97■■□□□ 1.27
SNRNP70-204ENST00000595231 CYTH1Q15438 398 aa22.97■■□□□ 1.27
SNRNP70-204ENST00000595231 SIX1Q15475 284 aaPredicted RBP22.97■■□□□ 1.27
SNRNP70-204ENST00000595231 ACCSLQ4AC99 568 aa22.97■■□□□ 1.27
SNRNP70-204ENST00000595231 EOGTQ5NDL2 527 aa22.97■■□□□ 1.27
SNRNP70-204ENST00000595231 SDE2Q6IQ49 451 aa22.97■■□□□ 1.27
SNRNP70-204ENST00000595231 TMEM92Q6UXU6 159 aa22.97■■□□□ 1.27
SNRNP70-204ENST00000595231 MAMSTRQ6ZN01 415 aa22.97■■□□□ 1.27
SNRNP70-204ENST00000595231 ADAT2Q7Z6V5 191 aaKnown RBP22.97■■□□□ 1.27
SNRNP70-204ENST00000595231 CASKIN2Q8WXE0 1202 aa22.97■■□□□ 1.27
SNRNP70-204ENST00000595231 FATE1Q969F0 183 aa22.97■■□□□ 1.27
SNRNP70-204ENST00000595231 ZNF599Q96NL3 588 aa22.97■■□□□ 1.27
SNRNP70-204ENST00000595231 TTC7AQ9ULT0 858 aaPredicted RBP22.97■■□□□ 1.27
SNRNP70-204ENST00000595231 CKAP5Q14008 2032 aa22.96■■□□□ 1.27
SNRNP70-204ENST00000595231 TMCC1O94876 653 aa22.96■■□□□ 1.27
SNRNP70-204ENST00000595231 EPHX1P07099 455 aa22.96■■□□□ 1.27
SNRNP70-204ENST00000595231 TCP1P17987 556 aaKnown RBP22.96■■□□□ 1.27
SNRNP70-204ENST00000595231 ZNF33AQ06730 810 aa22.96■■□□□ 1.27
SNRNP70-204ENST00000595231 KIAA1211LQ6NV74 962 aa22.96■■□□□ 1.27
SNRNP70-204ENST00000595231 ZC3H18Q86VM9 953 aaKnown RBP22.96■■□□□ 1.27
SNRNP70-204ENST00000595231 ISG20Q96AZ6 181 aaKnown RBP22.96■■□□□ 1.27
SNRNP70-204ENST00000595231 ZNF419Q96HQ0 510 aaPredicted RBP22.96■■□□□ 1.27
SNRNP70-204ENST00000595231 IER2Q9BTL4 223 aa22.96■■□□□ 1.27
SNRNP70-204ENST00000595231 BRD8Q9H0E9 1235 aa22.96■■□□□ 1.27
SNRNP70-204ENST00000595231 PPP1R12AO14974 1030 aaPredicted RBP22.95■■□□□ 1.26
SNRNP70-204ENST00000595231 MATN3O15232 486 aa22.95■■□□□ 1.26
SNRNP70-204ENST00000595231 HOXB2P14652 356 aa22.95■■□□□ 1.26
SNRNP70-204ENST00000595231 CASQ1P31415 396 aa22.95■■□□□ 1.26
SNRNP70-204ENST00000595231 XRCC4Q13426 336 aa22.95■■□□□ 1.26
SNRNP70-204ENST00000595231 PRKD1Q15139 912 aaPredicted RBP22.95■■□□□ 1.26
SNRNP70-204ENST00000595231 CRY1Q16526 586 aa22.95■■□□□ 1.26
SNRNP70-204ENST00000595231 CCDC13Q8IYE1 715 aa22.95■■□□□ 1.26
SNRNP70-204ENST00000595231 TTC13Q8NBP0 860 aa22.95■■□□□ 1.26
SNRNP70-204ENST00000595231 MAML1Q92585 1016 aa22.95■■□□□ 1.26
SNRNP70-204ENST00000595231 CEP44Q9C0F1 390 aa22.95■■□□□ 1.26
SNRNP70-204ENST00000595231 SUN2Q9UH99 717 aa22.95■■□□□ 1.26
SNRNP70-204ENST00000595231 SAR1BQ9Y6B6 198 aa22.95■■□□□ 1.26
SNRNP70-204ENST00000595231 COL9A1P20849 921 aa22.94■■□□□ 1.26
SNRNP70-204ENST00000595231 AP1B1Q10567 949 aa22.94■■□□□ 1.26
SNRNP70-204ENST00000595231 CAMK2GQ13555 558 aaPredicted RBP22.94■■□□□ 1.26
SNRNP70-204ENST00000595231 RFTN1Q14699 578 aaPredicted RBP22.94■■□□□ 1.26
SNRNP70-204ENST00000595231 LBRQ14739 615 aaKnown RBP22.94■■□□□ 1.26
SNRNP70-204ENST00000595231 C9orf64Q5T6V5 341 aa22.94■■□□□ 1.26
SNRNP70-204ENST00000595231 TMCO4Q5TGY1 634 aa22.94■■□□□ 1.26
SNRNP70-204ENST00000595231 TIGD7Q6NT04 549 aaPredicted RBP22.94■■□□□ 1.26
SNRNP70-204ENST00000595231 C22orf39Q6P5X5 142 aa22.94■■□□□ 1.26
SNRNP70-204ENST00000595231 Q6ZVU0 165 aa22.94■■□□□ 1.26
SNRNP70-204ENST00000595231 METTL3Q86U44 580 aaKnown RBP22.94■■□□□ 1.26
SNRNP70-204ENST00000595231 ACTRT1Q8TDG2 376 aa22.94■■□□□ 1.26
SNRNP70-204ENST00000595231 TFB1MQ8WVM0 346 aaKnown RBP22.94■■□□□ 1.26
SNRNP70-204ENST00000595231 TNKS2Q9H2K2 1166 aa22.94■■□□□ 1.26
SNRNP70-204ENST00000595231 PRSS16Q9NQE7 514 aa22.94■■□□□ 1.26
SNRNP70-204ENST00000595231 EDDM13A0A1B0GTR0 161 aa22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 PRR33A8MZF0 331 aa22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 AVPR2P30518 371 aa22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 HNRNPDQ14103 355 aaKnown RBP22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 LONRF2Q1L5Z9 754 aa22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 TEX26Q8N6G2 289 aa22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 TSEN2Q8NCE0 465 aaKnown RBP22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 OR2A12Q8NGT7 310 aa22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 SLC35B2Q8TB61 432 aa22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 ERLEC1Q96DZ1 483 aa22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 SMARCAL1Q9NZC9 954 aa22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 LHX3Q9UBR4 397 aa22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 SLC8A2Q9UPR5 921 aa22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 TARSL2A2RTX5 802 aaKnown RBP22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 HACD1B0YJ81 288 aa22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 KCNK1O00180 336 aa22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 SIN3BO75182 1162 aa22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 RBP3P10745 1247 aa22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 CCNB1P14635 433 aa22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 EIF3EP60228 445 aaKnown RBP22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 SLC45A4Q5BKX6 768 aa22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 CREG2Q8IUH2 290 aa22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 PCDH20Q8N6Y1 951 aaKnown RBP22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 ATG4AQ8WYN0 398 aa22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 QKIQ96PU8 341 aaKnown RBP eCLIP22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 PSKH2Q96QS6 385 aa22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 C10orf88Q9H8K7 445 aa22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 CACNA1IQ9P0X4 2223 aa22.93■■□□□ 1.26
SNRNP70-204ENST00000595231 MUSKO15146 869 aa22.92■■□□□ 1.26
SNRNP70-204ENST00000595231 SATB1Q01826 763 aa22.92■■□□□ 1.26
SNRNP70-204ENST00000595231 FAM182AQ5T1J6 154 aa22.92■■□□□ 1.26
SNRNP70-204ENST00000595231 MARC1Q5VT66 337 aa22.92■■□□□ 1.26
SNRNP70-204ENST00000595231 PLPP6Q8IY26 295 aa22.92■■□□□ 1.26
SNRNP70-204ENST00000595231 VOPP1Q96AW1 172 aa22.92■■□□□ 1.26
SNRNP70-204ENST00000595231 MCF2LO15068 1137 aa22.91■■□□□ 1.26
SNRNP70-204ENST00000595231 SYNCRIPO60506 623 aaKnown RBP22.91■■□□□ 1.26
SNRNP70-204ENST00000595231 CXCL12P48061 93 aa22.91■■□□□ 1.26
SNRNP70-204ENST00000595231 RENBPP51606 427 aa22.91■■□□□ 1.26
SNRNP70-204ENST00000595231 IFI35P80217 286 aaPredicted RBP22.91■■□□□ 1.26
SNRNP70-204ENST00000595231 ZBTB17Q13105 803 aa22.91■■□□□ 1.26
SNRNP70-204ENST00000595231 PGBD5Q8N414 524 aa22.91■■□□□ 1.26
SNRNP70-204ENST00000595231 NSMCE1Q8WV22 266 aa22.91■■□□□ 1.26
SNRNP70-204ENST00000595231 MAIP1Q8WWC4 291 aa22.91■■□□□ 1.26
SNRNP70-204ENST00000595231 C1orf54Q8WWF1 131 aa22.91■■□□□ 1.26
SNRNP70-204ENST00000595231 FAM129BQ96TA1 746 aa22.91■■□□□ 1.26
SNRNP70-204ENST00000595231 IL12RB2Q99665 862 aa22.91■■□□□ 1.26
SNRNP70-204ENST00000595231 C1QTNF1Q9BXJ1 281 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms