RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 ISCUQ9H1K1 167 aa17.72■□□□□ 0.43
IRF3-208ENST00000594387 ZNF212Q9UDV6 495 aa17.72■□□□□ 0.43
IRF3-208ENST00000594387 SERGEFQ9UGK8 458 aa17.72■□□□□ 0.43
IRF3-208ENST00000594387 IL36AQ9UHA7 158 aa17.72■□□□□ 0.43
IRF3-208ENST00000594387 PCSK1NQ9UHG2 260 aa17.72■□□□□ 0.43
IRF3-208ENST00000594387 AP4E1Q9UPM8 1137 aa17.72■□□□□ 0.43
IRF3-208ENST00000594387 PCDHB9Q9Y5E1 797 aa17.72■□□□□ 0.43
IRF3-208ENST00000594387 WDR87Q6ZQQ6 2873 aa17.71■□□□□ 0.43
IRF3-208ENST00000594387 A0A1W2PPC4 97 aa17.71■□□□□ 0.43
IRF3-208ENST00000594387 K7ERQ8 282 aa17.71■□□□□ 0.43
IRF3-208ENST00000594387 EEF2KO00418 725 aaKnown RBP17.71■□□□□ 0.43
IRF3-208ENST00000594387 SMAD6O43541 496 aaKnown RBP17.71■□□□□ 0.43
IRF3-208ENST00000594387 CASP14P31944 242 aa17.71■□□□□ 0.43
IRF3-208ENST00000594387 NUDT1P36639 197 aa17.71■□□□□ 0.43
IRF3-208ENST00000594387 GRIA4P48058 902 aa17.71■□□□□ 0.43
IRF3-208ENST00000594387 CSNK1EP49674 416 aaKnown RBP17.71■□□□□ 0.43
IRF3-208ENST00000594387 ADPRHP54922 357 aa17.71■□□□□ 0.43
IRF3-208ENST00000594387 RAD51Q06609 339 aa17.71■□□□□ 0.43
IRF3-208ENST00000594387 HNRNPDQ14103 355 aaKnown RBP17.71■□□□□ 0.43
IRF3-208ENST00000594387 ACAP1Q15027 740 aa17.71■□□□□ 0.43
IRF3-208ENST00000594387 POM121L1PQ3SYA9 428 aa17.71■□□□□ 0.43
IRF3-208ENST00000594387 CARD16Q5EG05 197 aa17.71■□□□□ 0.43
IRF3-208ENST00000594387 NLRP14Q86W24 1093 aa17.71■□□□□ 0.43
IRF3-208ENST00000594387 RTL3Q8N8U3 475 aaKnown RBP17.71■□□□□ 0.43
IRF3-208ENST00000594387 OR2A12Q8NGT7 310 aa17.71■□□□□ 0.43
IRF3-208ENST00000594387 HEPHQ9BQS7 1158 aa17.71■□□□□ 0.43
IRF3-208ENST00000594387 TNKS2Q9H2K2 1166 aa17.71■□□□□ 0.43
IRF3-208ENST00000594387 DHX35Q9H5Z1 703 aaKnown RBP17.71■□□□□ 0.43
IRF3-208ENST00000594387 GAREM1Q9H706 876 aa17.71■□□□□ 0.43
IRF3-208ENST00000594387 AASDHPPTQ9NRN7 309 aa17.71■□□□□ 0.43
IRF3-208ENST00000594387 DNAAF2Q9NVR5 837 aaKnown RBP17.71■□□□□ 0.43
IRF3-208ENST00000594387 A0A1B0GVT2 93 aa17.7■□□□□ 0.42
IRF3-208ENST00000594387 PCNX2A6NKB5 2137 aa17.7■□□□□ 0.42
IRF3-208ENST00000594387 BUB1O43683 1085 aa17.7■□□□□ 0.42
IRF3-208ENST00000594387 KDELR3O43731 214 aa17.7■□□□□ 0.42
IRF3-208ENST00000594387 ADRB1P08588 477 aa17.7■□□□□ 0.42
IRF3-208ENST00000594387 ACVRL1P37023 503 aa17.7■□□□□ 0.42
IRF3-208ENST00000594387 ZNF135P52742 658 aaPredicted RBP17.7■□□□□ 0.42
IRF3-208ENST00000594387 SNRPD1P62314 119 aaKnown RBP17.7■□□□□ 0.42
IRF3-208ENST00000594387 RACK1P63244 317 aaKnown RBP17.7■□□□□ 0.42
IRF3-208ENST00000594387 ARF5P84085 180 aa17.7■□□□□ 0.42
IRF3-208ENST00000594387 OGDHQ02218 1023 aa17.7■□□□□ 0.42
IRF3-208ENST00000594387 CNTN1Q12860 1018 aa17.7■□□□□ 0.42
IRF3-208ENST00000594387 SUZ12Q15022 739 aaKnown RBP17.7■□□□□ 0.42
IRF3-208ENST00000594387 HGSNATQ68CP4 663 aa17.7■□□□□ 0.42
IRF3-208ENST00000594387 SPECC1LQ69YQ0 1117 aa17.7■□□□□ 0.42
IRF3-208ENST00000594387 CASKIN2Q8WXE0 1202 aa17.7■□□□□ 0.42
IRF3-208ENST00000594387 ISG20Q96AZ6 181 aaKnown RBP17.7■□□□□ 0.42
IRF3-208ENST00000594387 MAGEB5Q9BZ81 275 aa17.7■□□□□ 0.42
IRF3-208ENST00000594387 DEF6Q9H4E7 631 aa17.7■□□□□ 0.42
IRF3-208ENST00000594387 TM9SF3Q9HD45 589 aa17.7■□□□□ 0.42
IRF3-208ENST00000594387 SARDHQ9UL12 918 aa17.7■□□□□ 0.42
IRF3-208ENST00000594387 TRPM6Q9BX84 2022 aa17.7■□□□□ 0.42
IRF3-208ENST00000594387 FRYLO94915 3013 aa17.69■□□□□ 0.42
IRF3-208ENST00000594387 UPK3BL1B0FP48 263 aa17.69■□□□□ 0.42
IRF3-208ENST00000594387 UPK3BL2E5RIL1 263 aa17.69■□□□□ 0.42
IRF3-208ENST00000594387 PLRG1O43660 514 aaKnown RBP17.69■□□□□ 0.42
IRF3-208ENST00000594387 DFNA5O60443 496 aa17.69■□□□□ 0.42
IRF3-208ENST00000594387 ZMPSTE24O75844 475 aa17.69■□□□□ 0.42
IRF3-208ENST00000594387 GYPCP04921 128 aa17.69■□□□□ 0.42
IRF3-208ENST00000594387 IGHV4-34P06331 123 aa17.69■□□□□ 0.42
IRF3-208ENST00000594387 DRD3P35462 400 aa17.69■□□□□ 0.42
IRF3-208ENST00000594387 PIGHQ14442 188 aaPredicted RBP17.69■□□□□ 0.42
IRF3-208ENST00000594387 HLA-BQ31612 363 aa17.69■□□□□ 0.42
IRF3-208ENST00000594387 PARP15Q460N3 678 aa17.69■□□□□ 0.42
IRF3-208ENST00000594387 ARSIQ5FYB1 569 aa17.69■□□□□ 0.42
IRF3-208ENST00000594387 CCDC122Q5T0U0 273 aa17.69■□□□□ 0.42
IRF3-208ENST00000594387 DPY19L3Q6ZPD9 716 aa17.69■□□□□ 0.42
IRF3-208ENST00000594387 DNAAF5Q86Y56 855 aa17.69■□□□□ 0.42
IRF3-208ENST00000594387 PSTKQ8IV42 348 aaKnown RBP17.69■□□□□ 0.42
IRF3-208ENST00000594387 DEFB124Q8NES8 71 aa17.69■□□□□ 0.42
IRF3-208ENST00000594387 C1orf216Q8TAB5 229 aa17.69■□□□□ 0.42
IRF3-208ENST00000594387 GRIN3AQ8TCU5 1115 aa17.69■□□□□ 0.42
IRF3-208ENST00000594387 PREBQ9HCU5 417 aa17.69■□□□□ 0.42
IRF3-208ENST00000594387 NDFIP2Q9NV92 336 aa17.69■□□□□ 0.42
IRF3-208ENST00000594387 HECAQ9UBI9 543 aaPredicted RBP17.69■□□□□ 0.42
IRF3-208ENST00000594387 ANKRD6Q9Y2G4 727 aa17.69■□□□□ 0.42
IRF3-208ENST00000594387 FCF1Q9Y324 198 aaKnown RBP17.69■□□□□ 0.42
IRF3-208ENST00000594387 WASH4PA8MWX3 477 aa17.68■□□□□ 0.42
IRF3-208ENST00000594387 PLK4O00444 970 aa17.68■□□□□ 0.42
IRF3-208ENST00000594387 MAGEC1O60732 1142 aa17.68■□□□□ 0.42
IRF3-208ENST00000594387 CD38P28907 300 aa17.68■□□□□ 0.42
IRF3-208ENST00000594387 MIPP30301 263 aa17.68■□□□□ 0.42
IRF3-208ENST00000594387 SEMA3BQ13214 749 aa17.68■□□□□ 0.42
IRF3-208ENST00000594387 SETMARQ53H47 684 aaPredicted RBP17.68■□□□□ 0.42
IRF3-208ENST00000594387 PPP6R3Q5H9R7 873 aaPredicted RBP17.68■□□□□ 0.42
IRF3-208ENST00000594387 N4BP2L1Q5TBK1 243 aaPredicted RBP17.68■□□□□ 0.42
IRF3-208ENST00000594387 NEK5Q6P3R8 708 aa17.68■□□□□ 0.42
IRF3-208ENST00000594387 ALKBH5Q6P6C2 394 aaKnown RBP17.68■□□□□ 0.42
IRF3-208ENST00000594387 FBXL19Q6PCT2 694 aa17.68■□□□□ 0.42
IRF3-208ENST00000594387 ERN2Q76MJ5 926 aaKnown RBP17.68■□□□□ 0.42
IRF3-208ENST00000594387 PLPP6Q8IY26 295 aa17.68■□□□□ 0.42
IRF3-208ENST00000594387 CHST14Q8NCH0 376 aa17.68■□□□□ 0.42
IRF3-208ENST00000594387 RNF214Q8ND24 703 aa17.68■□□□□ 0.42
IRF3-208ENST00000594387 OR8K1Q8NGG5 319 aa17.68■□□□□ 0.42
IRF3-208ENST00000594387 OR2I1PQ8NGU4 316 aa17.68■□□□□ 0.42
IRF3-208ENST00000594387 LRIG1Q96JA1 1093 aa17.68■□□□□ 0.42
IRF3-208ENST00000594387 SERAC1Q96JX3 654 aa17.68■□□□□ 0.42
IRF3-208ENST00000594387 ZDHHC6Q9H6R6 413 aa17.68■□□□□ 0.42
IRF3-208ENST00000594387 ZWILCHQ9H900 591 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms