RNA–Protein interactions for RNA: ENST00000592674.1

RPRD1A-211, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 4

Gene RPRD1A, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-211ENST00000592674 MATN3O15232 486 aa15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 SYNCRIPO60506 623 aaKnown RBP15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 TMCC1O94876 653 aa15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 PEX11BO96011 259 aa15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 VAV1P15498 845 aa15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 ATP5OP48047 213 aa15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 EIF3EP60228 445 aaKnown RBP15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 MTAPQ13126 283 aa15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 XRCC4Q13426 336 aa15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 RFTN1Q14699 578 aaPredicted RBP15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 LBRQ14739 615 aaKnown RBP15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 STARD3Q14849 445 aa15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 PRKD1Q15139 912 aaPredicted RBP15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 CYTH1Q15438 398 aa15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 HNRNPA1L2Q32P51 320 aaKnown RBP15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 INO80DQ53TQ3 878 aaPredicted RBP15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 TMCO4Q5TGY1 634 aa15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 SPEM1Q8N4L4 309 aa15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 TMEM105Q8N8V8 129 aa15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 FRS2Q8WU20 508 aa15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 QKIQ96PU8 341 aaKnown RBP eCLIP15.75■□□□□ 0.113e-11■■■■■ 30.3
RPRD1A-211ENST00000592674 CINPQ9BW66 212 aaPredicted RBP15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 CEP44Q9C0F1 390 aa15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 TNKS2Q9H2K2 1166 aa15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 C11orf16Q9NQ32 467 aa15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 POLR3BQ9NW08 1133 aaPredicted RBP15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 SEPT10Q9P0V9 454 aa15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 SUN2Q9UH99 717 aa15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 TTC7AQ9ULT0 858 aaPredicted RBP15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 MUC22E2RYF6 1773 aaPredicted RBP15.75■□□□□ 0.11
RPRD1A-211ENST00000592674 HACD1B0YJ81 288 aa15.74■□□□□ 0.11
RPRD1A-211ENST00000592674 KIF2AO00139 706 aaPredicted RBP15.74■□□□□ 0.11
RPRD1A-211ENST00000592674 PGRMC1O00264 195 aaKnown RBP15.74■□□□□ 0.11
RPRD1A-211ENST00000592674 MCF2LO15068 1137 aa15.74■□□□□ 0.11
RPRD1A-211ENST00000592674 BNIP3LO60238 219 aa15.74■□□□□ 0.11
RPRD1A-211ENST00000592674 TUBB4AP04350 444 aa15.74■□□□□ 0.11
RPRD1A-211ENST00000592674 RHOAP61586 193 aa15.74■□□□□ 0.11
RPRD1A-211ENST00000592674 ZNF33AQ06730 810 aa15.74■□□□□ 0.11
RPRD1A-211ENST00000592674 SLC10A7Q0GE19 358 aa15.74■□□□□ 0.11
RPRD1A-211ENST00000592674 SLC45A4Q5BKX6 768 aa15.74■□□□□ 0.11
RPRD1A-211ENST00000592674 MARC1Q5VT66 337 aa15.74■□□□□ 0.11
RPRD1A-211ENST00000592674 Q6ZVU0 165 aa15.74■□□□□ 0.11
RPRD1A-211ENST00000592674 SYT13Q7L8C5 426 aa15.74■□□□□ 0.11
RPRD1A-211ENST00000592674 CDKL3Q8IVW4 592 aaPredicted RBP15.74■□□□□ 0.11
RPRD1A-211ENST00000592674 PCDH20Q8N6Y1 951 aaKnown RBP15.74■□□□□ 0.11
RPRD1A-211ENST00000592674 ACTRT1Q8TDG2 376 aa15.74■□□□□ 0.11
RPRD1A-211ENST00000592674 ATG4AQ8WYN0 398 aa15.74■□□□□ 0.11
RPRD1A-211ENST00000592674 FATE1Q969F0 183 aa15.74■□□□□ 0.11
RPRD1A-211ENST00000592674 ISG20Q96AZ6 181 aaKnown RBP15.74■□□□□ 0.11
RPRD1A-211ENST00000592674 CAPZA3Q96KX2 299 aa15.74■□□□□ 0.11
RPRD1A-211ENST00000592674 NAP1L3Q99457 506 aaPredicted RBP15.74■□□□□ 0.11
RPRD1A-211ENST00000592674 SPATA6Q9NWH7 488 aaPredicted RBP15.74■□□□□ 0.11
RPRD1A-211ENST00000592674 C2orf42Q9NWW7 574 aa15.74■□□□□ 0.11
RPRD1A-211ENST00000592674 SMARCAL1Q9NZC9 954 aa15.74■□□□□ 0.11
RPRD1A-211ENST00000592674 SEPT3Q9UH03 358 aa15.74■□□□□ 0.11
RPRD1A-211ENST00000592674 BDP1A6H8Y1 2624 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 A0A1W2PQF6 199 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 TARSL2A2RTX5 802 aaKnown RBP15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 KCNK1O00180 336 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 GPR37L1O60883 481 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 SIN3BO75182 1162 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 ZNF821O75541 412 aaPredicted RBP15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 NEBLO76041 1014 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 RBP3P10745 1247 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 CCNB1P14635 433 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 COL9A1P20849 921 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 MMP13P45452 471 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 RENBPP51606 427 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 HNRNPDQ14103 355 aaKnown RBP15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 ZNF235Q14590 738 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 SIX1Q15475 284 aaPredicted RBP15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 CRY1Q16526 586 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 C9orf64Q5T6V5 341 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 KIAA1211LQ6NV74 962 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 DARS2Q6PI48 645 aaKnown RBP15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 TMEM92Q6UXU6 159 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 BBS5Q8N3I7 341 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 C1orf54Q8WWF1 131 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 MAML1Q92585 1016 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 ZNF592Q92610 1267 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 PTPRN2Q92932 1015 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 CCDC114Q96M63 670 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 FRMD8P1Q9BZ68 369 aaPredicted RBP15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 TM6SF2Q9BZW4 377 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 C10orf88Q9H8K7 445 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 PRSS16Q9NQE7 514 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 LHX3Q9UBR4 397 aa15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 NYNRINQ9P2P1 1898 aaKnown RBP15.73■□□□□ 0.11
RPRD1A-211ENST00000592674 TECTAO75443 2155 aa15.72■□□□□ 0.11
RPRD1A-211ENST00000592674 PRR33A8MZF0 331 aa15.72■□□□□ 0.11
RPRD1A-211ENST00000592674 LIASO43766 372 aa15.72■□□□□ 0.11
RPRD1A-211ENST00000592674 GSRP00390 522 aa15.72■□□□□ 0.11
RPRD1A-211ENST00000592674 JCHAINP01591 159 aa15.72■□□□□ 0.11
RPRD1A-211ENST00000592674 RBL1P28749 1068 aa15.72■□□□□ 0.11
RPRD1A-211ENST00000592674 RECQLP46063 649 aaPredicted RBP15.72■□□□□ 0.11
RPRD1A-211ENST00000592674 CCR3P51677 355 aa15.72■□□□□ 0.11
RPRD1A-211ENST00000592674 DGKEP52429 567 aa15.72■□□□□ 0.11
RPRD1A-211ENST00000592674 SNRPD1P62314 119 aaKnown RBP15.72■□□□□ 0.11
RPRD1A-211ENST00000592674 IFI35P80217 286 aaPredicted RBP15.72■□□□□ 0.11
RPRD1A-211ENST00000592674 SATB1Q01826 763 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms