RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 KLHL30Q0D2K2 578 aa20.6■□□□□ 0.89
CIRBP-239ENST00000592467 PIP5KL1Q5T9C9 394 aa20.6■□□□□ 0.89
CIRBP-239ENST00000592467 RETSATQ6NUM9 610 aa20.6■□□□□ 0.89
CIRBP-239ENST00000592467 LRSAM1Q6UWE0 723 aa20.6■□□□□ 0.89
CIRBP-239ENST00000592467 DPY19L3Q6ZPD9 716 aa20.6■□□□□ 0.89
CIRBP-239ENST00000592467 CYP4V2Q6ZWL3 525 aaPredicted RBP20.6■□□□□ 0.89
CIRBP-239ENST00000592467 TMC6Q7Z403 805 aa20.6■□□□□ 0.89
CIRBP-239ENST00000592467 CEP44Q9C0F1 390 aa20.6■□□□□ 0.89
CIRBP-239ENST00000592467 PARVAQ9NVD7 372 aa20.6■□□□□ 0.89
CIRBP-239ENST00000592467 WASF2Q9Y6W5 498 aa20.6■□□□□ 0.89
CIRBP-239ENST00000592467 WASH4PA8MWX3 477 aa20.59■□□□□ 0.89
CIRBP-239ENST00000592467 VILLO15195 856 aa20.59■□□□□ 0.89
CIRBP-239ENST00000592467 CBFA2T3O75081 653 aa20.59■□□□□ 0.89
CIRBP-239ENST00000592467 CTSKP43235 329 aa20.59■□□□□ 0.89
CIRBP-239ENST00000592467 AIF1P55008 147 aa20.59■□□□□ 0.89
CIRBP-239ENST00000592467 UBASH3AP57075 661 aa20.59■□□□□ 0.89
CIRBP-239ENST00000592467 SCYL2Q6P3W7 929 aa20.59■□□□□ 0.89
CIRBP-239ENST00000592467 DCUN1D2Q6PH85 259 aa20.59■□□□□ 0.89
CIRBP-239ENST00000592467 IL27RAQ6UWB1 636 aa20.59■□□□□ 0.89
CIRBP-239ENST00000592467 RTL3Q8N8U3 475 aaKnown RBP20.59■□□□□ 0.89
CIRBP-239ENST00000592467 CNTNAP3BQ96NU0 1288 aa20.59■□□□□ 0.89
CIRBP-239ENST00000592467 PEBP4Q96S96 227 aa20.59■□□□□ 0.89
CIRBP-239ENST00000592467 CNTNAP3Q9BZ76 1288 aa20.59■□□□□ 0.89
CIRBP-239ENST00000592467 ISCUQ9H1K1 167 aa20.59■□□□□ 0.89
CIRBP-239ENST00000592467 MAGEH1Q9H213 219 aa20.59■□□□□ 0.89
CIRBP-239ENST00000592467 FCF1Q9Y324 198 aaKnown RBP20.59■□□□□ 0.89
CIRBP-239ENST00000592467 SPAARA0A1B0GVQ0 90 aa20.58■□□□□ 0.89
CIRBP-239ENST00000592467 ANKRD62A6NC57 917 aa20.58■□□□□ 0.89
CIRBP-239ENST00000592467 CER1O95813 267 aa20.58■□□□□ 0.89
CIRBP-239ENST00000592467 PTMSP20962 102 aa20.58■□□□□ 0.89
CIRBP-239ENST00000592467 ZNF423Q2M1K9 1284 aa20.58■□□□□ 0.89
CIRBP-239ENST00000592467 EFHC2Q5JST6 749 aa20.58■□□□□ 0.89
CIRBP-239ENST00000592467 TRIM69Q86WT6 500 aa20.58■□□□□ 0.89
CIRBP-239ENST00000592467 NAXDQ8IW45 347 aa20.58■□□□□ 0.89
CIRBP-239ENST00000592467 PCDH20Q8N6Y1 951 aaKnown RBP20.58■□□□□ 0.89
CIRBP-239ENST00000592467 SYN2Q92777 582 aaPredicted RBP20.58■□□□□ 0.89
CIRBP-239ENST00000592467 KLC2Q9H0B6 622 aa20.58■□□□□ 0.89
CIRBP-239ENST00000592467 SLC32A1Q9H598 525 aa20.58■□□□□ 0.89
CIRBP-239ENST00000592467 TM7SF3Q9NS93 570 aa20.58■□□□□ 0.89
CIRBP-239ENST00000592467 CABIN1Q9Y6J0 2220 aa20.58■□□□□ 0.88
CIRBP-239ENST00000592467 CHD8Q9HCK8 2581 aa20.57■□□□□ 0.88
CIRBP-239ENST00000592467 FRYQ5TBA9 3013 aa20.57■□□□□ 0.88
CIRBP-239ENST00000592467 TBC1D3DA0A087WVF3 549 aa20.57■□□□□ 0.88
CIRBP-239ENST00000592467 TBC1D3IA0A087WXS9 549 aa20.57■□□□□ 0.88
CIRBP-239ENST00000592467 TBC1D3EA0A087X179 549 aa20.57■□□□□ 0.88
CIRBP-239ENST00000592467 TBC1D3KA0A087X1G2 549 aa20.57■□□□□ 0.88
CIRBP-239ENST00000592467 TBC1D3FA6NER0 549 aaPredicted RBP20.57■□□□□ 0.88
CIRBP-239ENST00000592467 TBC1D3LB9A6J9 549 aa20.57■□□□□ 0.88
CIRBP-239ENST00000592467 KCNK3O14649 394 aa20.57■□□□□ 0.88
CIRBP-239ENST00000592467 TOP3BO95985 862 aaKnown RBP20.57■□□□□ 0.88
CIRBP-239ENST00000592467 TBC1D3HP0C7X1 549 aa20.57■□□□□ 0.88
CIRBP-239ENST00000592467 EPHB2P29323 1055 aa20.57■□□□□ 0.88
CIRBP-239ENST00000592467 ETFBP38117 255 aa20.57■□□□□ 0.88
CIRBP-239ENST00000592467 TPM4P67936 248 aa20.57■□□□□ 0.88
CIRBP-239ENST00000592467 TEAD4Q15561 434 aa20.57■□□□□ 0.88
CIRBP-239ENST00000592467 CA9Q16790 459 aa20.57■□□□□ 0.88
CIRBP-239ENST00000592467 ARSIQ5FYB1 569 aa20.57■□□□□ 0.88
CIRBP-239ENST00000592467 TBC1D3GQ6DHY5 549 aa20.57■□□□□ 0.88
CIRBP-239ENST00000592467 TBC1D3CQ6IPX1 549 aa20.57■□□□□ 0.88
CIRBP-239ENST00000592467 PLPP6Q8IY26 295 aa20.57■□□□□ 0.88
CIRBP-239ENST00000592467 TBC1D3Q8IZP1 549 aaPredicted RBP20.57■□□□□ 0.88
CIRBP-239ENST00000592467 BAHD1Q8TBE0 780 aaPredicted RBP20.57■□□□□ 0.88
CIRBP-239ENST00000592467 FNIP1Q8TF40 1166 aa20.57■□□□□ 0.88
CIRBP-239ENST00000592467 ISG20Q96AZ6 181 aaKnown RBP20.57■□□□□ 0.88
CIRBP-239ENST00000592467 CCDC114Q96M63 670 aa20.57■□□□□ 0.88
CIRBP-239ENST00000592467 GPATCH2LQ9NWQ4 482 aa20.57■□□□□ 0.88
CIRBP-239ENST00000592467 CNOT8Q9UFF9 292 aaKnown RBP20.57■□□□□ 0.88
CIRBP-239ENST00000592467 IL36AQ9UHA7 158 aa20.57■□□□□ 0.88
CIRBP-239ENST00000592467 TPX2Q9ULW0 747 aaKnown RBP20.57■□□□□ 0.88
CIRBP-239ENST00000592467 CAPN11Q9UMQ6 739 aa20.57■□□□□ 0.88
CIRBP-239ENST00000592467 PCDHGB2Q9Y5G2 931 aa20.57■□□□□ 0.88
CIRBP-239ENST00000592467 H0Y8X5 98 aa20.56■□□□□ 0.88
CIRBP-239ENST00000592467 KDELR3O43731 214 aa20.56■□□□□ 0.88
CIRBP-239ENST00000592467 RAMP2O60895 175 aa20.56■□□□□ 0.88
CIRBP-239ENST00000592467 LEFTY1O75610 366 aa20.56■□□□□ 0.88
CIRBP-239ENST00000592467 PRNPP04156 253 aa20.56■□□□□ 0.88
CIRBP-239ENST00000592467 GYPCP04921 128 aa20.56■□□□□ 0.88
CIRBP-239ENST00000592467 PSMA2P25787 234 aa20.56■□□□□ 0.88
CIRBP-239ENST00000592467 CCNHP51946 323 aaPredicted RBP20.56■□□□□ 0.88
CIRBP-239ENST00000592467 POLD3Q15054 466 aaPredicted RBP20.56■□□□□ 0.88
CIRBP-239ENST00000592467 CARD16Q5EG05 197 aa20.56■□□□□ 0.88
CIRBP-239ENST00000592467 HDAC8Q9BY41 377 aa20.56■□□□□ 0.88
CIRBP-239ENST00000592467 PREBQ9HCU5 417 aa20.56■□□□□ 0.88
CIRBP-239ENST00000592467 IFNKQ9P0W0 207 aa20.56■□□□□ 0.88
CIRBP-239ENST00000592467 ANGPTL2Q9UKU9 493 aa20.56■□□□□ 0.88
CIRBP-239ENST00000592467 PCOLCE2Q9UKZ9 415 aa20.56■□□□□ 0.88
CIRBP-239ENST00000592467 FARP1Q9Y4F1 1045 aaPredicted RBP20.56■□□□□ 0.88
CIRBP-239ENST00000592467 ACACBO00763 2458 aa20.56■□□□□ 0.88
CIRBP-239ENST00000592467 TPRP12270 2363 aaKnown RBP20.55■□□□□ 0.88
CIRBP-239ENST00000592467 KPNA3O00505 521 aaPredicted RBP20.55■□□□□ 0.88
CIRBP-239ENST00000592467 CREB3O43889 395 aa20.55■□□□□ 0.88
CIRBP-239ENST00000592467 ZBED6P86452 979 aa20.55■□□□□ 0.88
CIRBP-239ENST00000592467 SHBQ15464 509 aa20.55■□□□□ 0.88
CIRBP-239ENST00000592467 LEKR1Q6ZMV7 388 aa20.55■□□□□ 0.88
CIRBP-239ENST00000592467 UMODL1-AS1Q8N2C9 162 aa20.55■□□□□ 0.88
CIRBP-239ENST00000592467 GRIN3AQ8TCU5 1115 aa20.55■□□□□ 0.88
CIRBP-239ENST00000592467 ZNF653Q96CK0 615 aa20.55■□□□□ 0.88
CIRBP-239ENST00000592467 HEPHQ9BQS7 1158 aa20.55■□□□□ 0.88
CIRBP-239ENST00000592467 SNRNP25Q9BV90 132 aaKnown RBP20.55■□□□□ 0.88
CIRBP-239ENST00000592467 NENFQ9UMX5 172 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms