RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 METAP1P53582 386 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 LIMK1P53667 647 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 GEMIN4P57678 1058 aaKnown RBP9.38□□□□□ -0.91
DNMT1-223ENST00000591239 YBEYP58557 167 aaPredicted RBP9.38□□□□□ -0.91
DNMT1-223ENST00000591239 PUM1Q14671 1186 aaKnown RBP eCLIP9.38□□□□□ -0.914e-6■□□□□ 8.5
DNMT1-223ENST00000591239 POM121L1PQ3SYA9 428 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 PARP15Q460N3 678 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 BOLA3Q53S33 107 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 PPP6R3Q5H9R7 873 aaPredicted RBP9.38□□□□□ -0.91
DNMT1-223ENST00000591239 KCNT1Q5JUK3 1230 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 FAM46CQ5VWP2 391 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 C22orf39Q6P5X5 142 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 LEKR1Q6ZMV7 388 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 RFX8Q6ZV50 586 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 H2AFVQ71UI9 128 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 ZNF354CQ86Y25 554 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 UMODL1-AS1Q8N2C9 162 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 PCDH20Q8N6Y1 951 aaKnown RBP9.38□□□□□ -0.91
DNMT1-223ENST00000591239 PIP4K2CQ8TBX8 421 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 CTNNBL1Q8WYA6 563 aaPredicted RBP9.38□□□□□ -0.91
DNMT1-223ENST00000591239 ISG20Q96AZ6 181 aaKnown RBP9.38□□□□□ -0.91
DNMT1-223ENST00000591239 KCTD15Q96SI1 283 aaPredicted RBP9.38□□□□□ -0.91
DNMT1-223ENST00000591239 EDEM2Q9BV94 578 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 PACSIN1Q9BY11 444 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 CEP44Q9C0F1 390 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 MIR1-1HGQ9H1L0 117 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 TNKS2Q9H2K2 1166 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 ZWILCHQ9H900 591 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 CTTNBP2NLQ9P2B4 639 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 UVRAGQ9P2Y5 699 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 EIF2B4Q9UI10 523 aaKnown RBP9.38□□□□□ -0.91
DNMT1-223ENST00000591239 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.38□□□□□ -0.91
DNMT1-223ENST00000591239 ACTL7AQ9Y615 435 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 PI4KAP42356 2102 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 ZSCAN5CA6NGD5 496 aaPredicted RBP9.37□□□□□ -0.91
DNMT1-223ENST00000591239 LRRC72A6NJI9 287 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 RASA4BC9J798 803 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 C1QTNF3-AMACRE9PGA6 284 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 SLC30A4O14863 429 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 RASA4O43374 803 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 BUB1O43683 1085 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 FSBPO95073 299 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 CTSLP07711 333 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 RARAP10276 462 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 ERCC2P18074 760 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 CHRNA3P32297 505 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 RECQLP46063 649 aaPredicted RBP9.37□□□□□ -0.91
DNMT1-223ENST00000591239 HCAR3P49019 387 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 DNA2P51530 1060 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 ZNF75DP51815 510 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 ZNF135P52742 658 aaPredicted RBP9.37□□□□□ -0.91
DNMT1-223ENST00000591239 NDST2P52849 883 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 ADPRHP54922 357 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 SLC25A11Q02978 314 aaKnown RBP9.37□□□□□ -0.91
DNMT1-223ENST00000591239 SERINC3Q13530 473 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 DPYSL2Q16555 572 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 SMTNL2Q2TAL5 461 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 ARSIQ5FYB1 569 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 STPG1Q5TH74 334 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 NCEH1Q6PIU2 408 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.37□□□□□ -0.91
DNMT1-223ENST00000591239 DPY19L3Q6ZPD9 716 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 PIP4P2Q8N4L2 257 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 TC2NQ8N9U0 490 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 CHST14Q8NCH0 376 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 TMIEQ8NEW7 156 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 OR2T34Q8NGX1 318 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 OR14C36Q8NHC7 312 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 ZNF564Q8TBZ8 553 aaPredicted RBP9.37□□□□□ -0.91
DNMT1-223ENST00000591239 SNX19Q92543 992 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 HSPH1Q92598 858 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 BIRC7Q96CA5 298 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 HMCESQ96FZ2 354 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 MRFAP1L1Q96HT8 127 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 RTKNQ9BST9 563 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 KLC2Q9H0B6 622 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 LRRC19Q9H756 370 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 CAPN10Q9HC96 672 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 FSCN3Q9NQT6 498 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.37□□□□□ -0.91
DNMT1-223ENST00000591239 SPTLC3Q9NUV7 552 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 WDR70Q9NW82 654 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 CWC15Q9P013 229 aaKnown RBP9.37□□□□□ -0.91
DNMT1-223ENST00000591239 SUSD2Q9UGT4 822 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 IL36AQ9UHA7 158 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 SLC6A14Q9UN76 642 aa9.37□□□□□ -0.91
DNMT1-223ENST00000591239 FCF1Q9Y324 198 aaKnown RBP9.37□□□□□ -0.91
DNMT1-223ENST00000591239 NYNRINQ9P2P1 1898 aaKnown RBP9.36□□□□□ -0.91
DNMT1-223ENST00000591239 TBC1D3DA0A087WVF3 549 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 TBC1D3IA0A087WXS9 549 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 TBC1D3EA0A087X179 549 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 TBC1D3KA0A087X1G2 549 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 A0A1B0GTW7 788 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 TBC1D3FA6NER0 549 aaPredicted RBP9.36□□□□□ -0.91
DNMT1-223ENST00000591239 TBC1D3LB9A6J9 549 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 PLK4O00444 970 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 KPNA3O00505 521 aaPredicted RBP9.36□□□□□ -0.91
DNMT1-223ENST00000591239 CDX4O14627 284 aaPredicted RBP9.36□□□□□ -0.91
DNMT1-223ENST00000591239 BCAT2O15382 392 aaPredicted RBP9.36□□□□□ -0.91
DNMT1-223ENST00000591239 SLC7A4O43246 635 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms