RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 CYTH1Q15438 398 aa12.28□□□□□ -0.44
APOC1-206ENST00000590334 OASLQ15646 514 aaKnown RBP12.28□□□□□ -0.44
APOC1-206ENST00000590334 HNRNPA1L2Q32P51 320 aaKnown RBP12.28□□□□□ -0.44
APOC1-206ENST00000590334 FNDC3BQ53EP0 1204 aaKnown RBP12.28□□□□□ -0.44
APOC1-206ENST00000590334 C2orf27AQ580R0 203 aa12.28□□□□□ -0.44
APOC1-206ENST00000590334 DRICH1Q6PGQ1 229 aaPredicted RBP12.28□□□□□ -0.44
APOC1-206ENST00000590334 SERPINA13PQ6UXR4 307 aa12.28□□□□□ -0.44
APOC1-206ENST00000590334 MAMSTRQ6ZN01 415 aa12.28□□□□□ -0.44
APOC1-206ENST00000590334 ADAT2Q7Z6V5 191 aaKnown RBP12.28□□□□□ -0.44
APOC1-206ENST00000590334 ZC3H18Q86VM9 953 aaKnown RBP12.28□□□□□ -0.44
APOC1-206ENST00000590334 PLPP6Q8IY26 295 aa12.28□□□□□ -0.44
APOC1-206ENST00000590334 CCDC13Q8IYE1 715 aa12.28□□□□□ -0.44
APOC1-206ENST00000590334 CCDC33Q8N5R6 958 aa12.28□□□□□ -0.44
APOC1-206ENST00000590334 ALLCQ8N6M5 410 aa12.28□□□□□ -0.44
APOC1-206ENST00000590334 ATP11CQ8NB49 1132 aa12.28□□□□□ -0.44
APOC1-206ENST00000590334 CCNYQ8ND76 341 aa12.28□□□□□ -0.44
APOC1-206ENST00000590334 RPLP0P6Q8NHW5 317 aa12.28□□□□□ -0.44
APOC1-206ENST00000590334 NKD2Q969F2 451 aaPredicted RBP12.28□□□□□ -0.44
APOC1-206ENST00000590334 HOMER3Q9NSC5 361 aa12.28□□□□□ -0.44
APOC1-206ENST00000590334 AMACRQ9UHK6 382 aa12.28□□□□□ -0.44
APOC1-206ENST00000590334 MMP17Q9ULZ9 603 aa12.28□□□□□ -0.44
APOC1-206ENST00000590334 ACTL7AQ9Y615 435 aa12.28□□□□□ -0.44
APOC1-206ENST00000590334 TARSL2A2RTX5 802 aaKnown RBP12.27□□□□□ -0.45
APOC1-206ENST00000590334 TTC34A8MYJ7 566 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 MCF2LO15068 1137 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 ATG13O75143 517 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 TMCC1O94876 653 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 KLF8O95600 359 aaPredicted RBP12.27□□□□□ -0.45
APOC1-206ENST00000590334 RBP3P10745 1247 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 CCNB1P14635 433 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 VAV1P15498 845 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 PRKCHP24723 683 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 NSUN2Q08J23 767 aaKnown RBP eCLIP12.27□□□□□ -0.45
APOC1-206ENST00000590334 SLC10A7Q0GE19 358 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 AP1B1Q10567 949 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 LBRQ14739 615 aaKnown RBP12.27□□□□□ -0.45
APOC1-206ENST00000590334 DLG2Q15700 870 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 CYP1B1Q16678 543 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 MARC1Q5VT66 337 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 SDE2Q6IQ49 451 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 C22orf39Q6P5X5 142 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 PKN3Q6P5Z2 889 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 LEKR1Q6ZMV7 388 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 Q6ZS52 159 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 SYT13Q7L8C5 426 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 CDKL3Q8IVW4 592 aaPredicted RBP12.27□□□□□ -0.45
APOC1-206ENST00000590334 CHPFQ8IZ52 775 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 PCDH20Q8N6Y1 951 aaKnown RBP12.27□□□□□ -0.45
APOC1-206ENST00000590334 PRELID2Q8N945 189 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 C12orf50Q8NA57 414 aaPredicted RBP12.27□□□□□ -0.45
APOC1-206ENST00000590334 TXNDC5Q8NBS9 432 aaKnown RBP12.27□□□□□ -0.45
APOC1-206ENST00000590334 FLCNQ8NFG4 579 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 ZNF419Q96HQ0 510 aaPredicted RBP12.27□□□□□ -0.45
APOC1-206ENST00000590334 PSKH2Q96QS6 385 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 IL12RB2Q99665 862 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 EPHX3Q9H6B9 360 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 USP29Q9HBJ7 922 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 CD248Q9HCU0 757 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 CACNA2D2Q9NY47 1150 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 LHX3Q9UBR4 397 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 SUN2Q9UH99 717 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 SLC8A2Q9UPR5 921 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 PLXND1Q9Y4D7 1925 aa12.27□□□□□ -0.45
APOC1-206ENST00000590334 EDDM13A0A1B0GTR0 161 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 A0A1W2PQF6 199 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 WASH3PC4AMC7 463 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 H7C0C1 242 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 SGK1O00141 431 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 PI15O43692 258 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 GSRP00390 522 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 ITGAVP06756 1048 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 DCNP07585 359 aaKnown RBP12.26□□□□□ -0.45
APOC1-206ENST00000590334 RBL1P28749 1068 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 HSPA9P38646 679 aaKnown RBP12.26□□□□□ -0.45
APOC1-206ENST00000590334 MMP13P45452 471 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 ATP5OP48047 213 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 WASHC5Q12768 1159 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 CAMK2GQ13555 558 aaPredicted RBP12.26□□□□□ -0.45
APOC1-206ENST00000590334 TUBB2AQ13885 445 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 BYSLQ13895 437 aaKnown RBP12.26□□□□□ -0.45
APOC1-206ENST00000590334 EOGTQ5NDL2 527 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 C9orf64Q5T6V5 341 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 HEATR6Q6AI08 1181 aaKnown RBP12.26□□□□□ -0.45
APOC1-206ENST00000590334 ALG1LQ6GMV1 187 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 ZNF572Q7Z3I7 529 aaPredicted RBP12.26□□□□□ -0.45
APOC1-206ENST00000590334 SPEM1Q8N4L4 309 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 KIF18AQ8NI77 898 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 LRRN4Q8WUT4 740 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 NSMCE1Q8WV22 266 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 C1orf54Q8WWF1 131 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 HTR3CQ8WXA8 447 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 ATG4AQ8WYN0 398 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 PTPRN2Q92932 1015 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 PBXIP1Q96AQ6 731 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 VAT1Q99536 393 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 FAM118BQ9BPY3 351 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 TUBB2BQ9BVA1 445 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 ZDHHC4Q9NPG8 344 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 SMARCAL1Q9NZC9 954 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 SEPT3Q9UH03 358 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms