RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 STAT1P42224 750 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 PTPN9P43378 593 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 SERPINH1P50454 418 aaKnown RBP12.48□□□□□ -0.41
VAT1-206ENST00000589709 GSCP56915 257 aaPredicted RBP12.48□□□□□ -0.41
VAT1-206ENST00000589709 ATP11AP98196 1134 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 GNA12Q03113 381 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 CCDC14Q49A88 953 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 ARSIQ5FYB1 569 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 MANEALQ5VSG8 457 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 LINGO4Q6UY18 593 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 DPY19L3Q6ZPD9 716 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 ERN2Q76MJ5 926 aaKnown RBP12.48□□□□□ -0.41
VAT1-206ENST00000589709 STRADAQ7RTN6 431 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 HORMAD1Q86X24 394 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 PLPP6Q8IY26 295 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 EID2Q8N6I1 236 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 PCDH20Q8N6Y1 951 aaKnown RBP12.48□□□□□ -0.41
VAT1-206ENST00000589709 EMC1Q8N766 993 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 PDCD7Q8N8D1 485 aaKnown RBP12.48□□□□□ -0.41
VAT1-206ENST00000589709 CHST14Q8NCH0 376 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 RXFP2Q8WXD0 754 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 TSC1Q92574 1164 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 CENPIQ92674 756 aaPredicted RBP12.48□□□□□ -0.41
VAT1-206ENST00000589709 ISG20Q96AZ6 181 aaKnown RBP12.48□□□□□ -0.41
VAT1-206ENST00000589709 ARRDC3Q96B67 414 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 KLHDC7BQ96G42 594 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 PPP1R16AQ96I34 528 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 CNDP2Q96KP4 475 aaKnown RBP12.48□□□□□ -0.41
VAT1-206ENST00000589709 ATP13A1Q9HD20 1204 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 DYRK4Q9NR20 520 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 METTL5Q9NRN9 209 aaKnown RBP12.48□□□□□ -0.41
VAT1-206ENST00000589709 FANCLQ9NW38 375 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 OR12D3Q9UGF7 316 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 IL36AQ9UHA7 158 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 SPEGQ15772 3267 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 FREM2Q5SZK8 3169 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 ACACAQ13085 2346 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 GOLGA4Q13439 2230 aaKnown RBP12.47□□□□□ -0.41
VAT1-206ENST00000589709 APC2O95996 2303 aa12.47□□□□□ -0.41
VAT1-206ENST00000589709 TRABD2BA6NFA1 517 aa12.47□□□□□ -0.41
VAT1-206ENST00000589709 EPHB6O15197 1021 aa12.47□□□□□ -0.41
VAT1-206ENST00000589709 RHOQP17081 205 aa12.47□□□□□ -0.41
VAT1-206ENST00000589709 GLDCP23378 1020 aa12.47□□□□□ -0.41
VAT1-206ENST00000589709 MAPKAPK2P49137 400 aa12.47□□□□□ -0.41
VAT1-206ENST00000589709 KLK7P49862 253 aa12.47□□□□□ -0.41
VAT1-206ENST00000589709 COPB1P53618 953 aaKnown RBP12.47□□□□□ -0.41
VAT1-206ENST00000589709 ARF5P84085 180 aa12.47□□□□□ -0.41
VAT1-206ENST00000589709 PTP4A2Q12974 167 aa12.47□□□□□ -0.41
VAT1-206ENST00000589709 BNIP3Q12983 259 aa12.47□□□□□ -0.41
VAT1-206ENST00000589709 ILKQ13418 452 aa12.47□□□□□ -0.41
VAT1-206ENST00000589709 ZNF284Q2VY69 593 aa12.47□□□□□ -0.41
VAT1-206ENST00000589709 CARD16Q5EG05 197 aa12.47□□□□□ -0.41
VAT1-206ENST00000589709 DHRS13Q6UX07 377 aa12.47□□□□□ -0.41
VAT1-206ENST00000589709 PHF13Q86YI8 300 aaPredicted RBP12.47□□□□□ -0.41
VAT1-206ENST00000589709 FAM174AQ8TBP5 190 aa12.47□□□□□ -0.41
VAT1-206ENST00000589709 PCDHB18PQ96TA0 734 aa12.47□□□□□ -0.41
VAT1-206ENST00000589709 HEPHQ9BQS7 1158 aa12.47□□□□□ -0.41
VAT1-206ENST00000589709 TNKS2Q9H2K2 1166 aa12.47□□□□□ -0.41
VAT1-206ENST00000589709 NLRC4Q9NPP4 1024 aa12.47□□□□□ -0.41
VAT1-206ENST00000589709 KLHL11Q9NVR0 708 aa12.47□□□□□ -0.41
VAT1-206ENST00000589709 LIMA1Q9UHB6 759 aaKnown RBP12.47□□□□□ -0.41
VAT1-206ENST00000589709 WASF2Q9Y6W5 498 aa12.47□□□□□ -0.41
VAT1-206ENST00000589709 FAM170AA1A519 330 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 GOLGA6L22H0YM25 854 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 RNF103O00237 685 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 SLC31A1O15431 190 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 LEFTY1O75610 366 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 RFPL3O75679 317 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 CD160O95971 181 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 KRT3P12035 628 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 HNRNPA2B1P22626 353 aaKnown RBP12.46□□□□□ -0.41
VAT1-206ENST00000589709 ITGB7P26010 798 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 L1CAMP32004 1257 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 NSFP46459 744 aaKnown RBP12.46□□□□□ -0.41
VAT1-206ENST00000589709 ACADVLP49748 655 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 GEMIN4P57678 1058 aaKnown RBP12.46□□□□□ -0.41
VAT1-206ENST00000589709 SYCP1Q15431 976 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 C15orf59Q2T9L4 293 aaPredicted RBP12.46□□□□□ -0.41
VAT1-206ENST00000589709 TMEM259Q4ZIN3 620 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 RAB6CQ53S08 254 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 CCDC157Q569K6 752 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 ZSCAN30Q86W11 494 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 NLRP14Q86W24 1093 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 DRC7Q8IY82 874 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 ANKRD20A12PQ8NF67 263 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 JOSD2Q8TAC2 188 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 SLC30A5Q8TAD4 765 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 MDM1Q8TC05 714 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 GRIN3AQ8TCU5 1115 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 GPT2Q8TD30 523 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 NTAN1Q96AB6 310 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 IFT43Q96FT9 208 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 LRIG1Q96JA1 1093 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 C11orf70Q9BRQ4 267 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 RAB6CQ9H0N0 254 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 MAGEH1Q9H213 219 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 ANO10Q9NW15 660 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 TMEM248Q9NWD8 314 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 ADAM22Q9P0K1 906 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 RALYQ9UKM9 306 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms