RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 SPINK2P20155 84 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 CSRP1P21291 193 aaKnown RBP11.82□□□□□ -0.52
RFX1-204ENST00000588885 C5AR1P21730 350 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 CD27P26842 260 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 PMLP29590 882 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 CYLC1P35663 651 aaPredicted RBP11.82□□□□□ -0.52
RFX1-204ENST00000588885 PTPN9P43378 593 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 AFF3P51826 1226 aaKnown RBP11.82□□□□□ -0.52
RFX1-204ENST00000588885 HDAC4P56524 1084 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 RPL7AP62424 266 aaKnown RBP11.82□□□□□ -0.52
RFX1-204ENST00000588885 FAM193AP78312 1265 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 SFSWAPQ12872 951 aaKnown RBP11.82□□□□□ -0.52
RFX1-204ENST00000588885 KIF19Q2TAC6 998 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 HLA-BQ31612 363 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 KCNT1Q5JUK3 1230 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 TBC1D3GQ6DHY5 549 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 TBC1D3CQ6IPX1 549 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 ACAD10Q6JQN1 1059 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 LEKR1Q6ZMV7 388 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 MON1BQ7L1V2 547 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 SETD3Q86TU7 594 aaPredicted RBP11.82□□□□□ -0.52
RFX1-204ENST00000588885 MCOLN2Q8IZK6 566 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 TBC1D3Q8IZP1 549 aaPredicted RBP11.82□□□□□ -0.52
RFX1-204ENST00000588885 PYROXD2Q8N2H3 581 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 SH2D3CQ8N5H7 860 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 C3orf20Q8ND61 904 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 OR2T34Q8NGX1 318 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 OR8D1Q8WZ84 308 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 CCDC42Q96M95 316 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 MCEEQ96PE7 176 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.82□□□□□ -0.52
RFX1-204ENST00000588885 C2orf49Q9BVC5 232 aaPredicted RBP11.82□□□□□ -0.52
RFX1-204ENST00000588885 TNKS2Q9H2K2 1166 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 EBF2Q9HAK2 575 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 ATP13A1Q9HD20 1204 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 DNAI1Q9UI46 699 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 NENFQ9UMX5 172 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 SNX11Q9Y5W9 270 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 ACTL7AQ9Y615 435 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 A0A0U1RQJ8 604 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 ILVBLA1L0T0 632 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 LRRC72A6NJI9 287 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 USP27XA6NNY8 438 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 RNF103O00237 685 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 CCP110O43303 1012 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 AKR1B10O60218 316 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 TOP3BO95985 862 aaKnown RBP11.81□□□□□ -0.52
RFX1-204ENST00000588885 MAT2AP31153 395 aaKnown RBP11.81□□□□□ -0.52
RFX1-204ENST00000588885 DRD3P35462 400 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 ACVRL1P37023 503 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 ADPRHP54922 357 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 SIM1P81133 766 aaPredicted RBP11.81□□□□□ -0.52
RFX1-204ENST00000588885 CNTN1Q12860 1018 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 TEAD4Q15561 434 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 PRAMEF14Q5SWL7 426 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 DCUN1D2Q6PH85 259 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 STRADAQ7RTN6 431 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 ADAT2Q7Z6V5 191 aaKnown RBP11.81□□□□□ -0.52
RFX1-204ENST00000588885 DSG4Q86SJ6 1040 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 PIP4P1Q86T03 277 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 ZSCAN30Q86W11 494 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 CCDC170Q8IYT3 715 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 CHST14Q8NCH0 376 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 OR2A12Q8NGT7 310 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 PIP4K2CQ8TBX8 421 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 CENPIQ92674 756 aaPredicted RBP11.81□□□□□ -0.52
RFX1-204ENST00000588885 SLC6A18Q96N87 628 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 ORAI3Q9BRQ5 295 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 ZDHHC5Q9C0B5 715 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 OSBPL2Q9H1P3 480 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 AASDHPPTQ9NRN7 309 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 NDFIP2Q9NV92 336 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 DNAAF2Q9NVR5 837 aaKnown RBP11.81□□□□□ -0.52
RFX1-204ENST00000588885 TMEM51Q9NW97 253 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 ZNF212Q9UDV6 495 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 PPM1HQ9ULR3 514 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 FZD4Q9ULV1 537 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 HS3ST2Q9Y278 367 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 ANKRD6Q9Y2G4 727 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 FNDC3AQ9Y2H6 1198 aaKnown RBP11.81□□□□□ -0.52
RFX1-204ENST00000588885 ADGRG1Q9Y653 693 aa11.81□□□□□ -0.52
RFX1-204ENST00000588885 BZW2Q9Y6E2 419 aaKnown RBP11.81□□□□□ -0.52
RFX1-204ENST00000588885 TMEM131Q92545 1883 aa11.8□□□□□ -0.52
RFX1-204ENST00000588885 A0A087X0T9 212 aa11.8□□□□□ -0.52
RFX1-204ENST00000588885 TCRBV5S1A1TA0A578 114 aa11.8□□□□□ -0.52
RFX1-204ENST00000588885 ANKRD62A6NC57 917 aa11.8□□□□□ -0.52
RFX1-204ENST00000588885 EIF3CLB5ME19 914 aaKnown RBP11.8□□□□□ -0.52
RFX1-204ENST00000588885 KPNA3O00505 521 aaPredicted RBP11.8□□□□□ -0.52
RFX1-204ENST00000588885 WNT9AO14904 365 aa11.8□□□□□ -0.52
RFX1-204ENST00000588885 MCF2LO15068 1137 aa11.8□□□□□ -0.52
RFX1-204ENST00000588885 GJB3O75712 270 aa11.8□□□□□ -0.52
RFX1-204ENST00000588885 LRIG2O94898 1065 aa11.8□□□□□ -0.52
RFX1-204ENST00000588885 CTSLP07711 333 aa11.8□□□□□ -0.52
RFX1-204ENST00000588885 FAM228BP0C875 321 aa11.8□□□□□ -0.52
RFX1-204ENST00000588885 CHRNA3P32297 505 aa11.8□□□□□ -0.52
RFX1-204ENST00000588885 ZNF143P52747 638 aaPredicted RBP11.8□□□□□ -0.52
RFX1-204ENST00000588885 PPP2CBP62714 309 aa11.8□□□□□ -0.52
RFX1-204ENST00000588885 PPP2CAP67775 309 aa11.8□□□□□ -0.52
RFX1-204ENST00000588885 SHC2P98077 582 aa11.8□□□□□ -0.52
RFX1-204ENST00000588885 OGDHQ02218 1023 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms