RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 LINC00523Q86TU6 105 aa11.61□□□□□ -0.55
SMAD4-205ENST00000588745 TNS4Q8IZW8 715 aa11.61□□□□□ -0.55
SMAD4-205ENST00000588745 C12orf76Q8N812 135 aaPredicted RBP11.61□□□□□ -0.55
SMAD4-205ENST00000588745 OR52K1Q8NGK4 314 aa11.61□□□□□ -0.55
SMAD4-205ENST00000588745 SPATA22Q8NHS9 363 aa11.61□□□□□ -0.55
SMAD4-205ENST00000588745 ING5Q8WYH8 240 aa11.61□□□□□ -0.55
SMAD4-205ENST00000588745 PGM2Q96G03 612 aa11.61□□□□□ -0.55
SMAD4-205ENST00000588745 CFAP36Q96G28 342 aa11.61□□□□□ -0.55
SMAD4-205ENST00000588745 EBNA1BP2Q99848 306 aaKnown RBP11.61□□□□□ -0.55
SMAD4-205ENST00000588745 SPON2Q9BUD6 331 aa11.61□□□□□ -0.55
SMAD4-205ENST00000588745 MUC3BQ9H195 1237 aa11.61□□□□□ -0.55
SMAD4-205ENST00000588745 CENPHQ9H3R5 247 aa11.61□□□□□ -0.55
SMAD4-205ENST00000588745 ACSS3Q9H6R3 686 aa11.61□□□□□ -0.55
SMAD4-205ENST00000588745 CASS4Q9NQ75 786 aa11.61□□□□□ -0.55
SMAD4-205ENST00000588745 VPS18Q9P253 973 aa11.61□□□□□ -0.55
SMAD4-205ENST00000588745 UBA2Q9UBT2 640 aaPredicted RBP11.61□□□□□ -0.55
SMAD4-205ENST00000588745 TLDC2A0PJX2 215 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 SDR42E2A6NKP2 422 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 AP3B1O00203 1094 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 RFXAPO00287 272 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 POLR3GO15318 223 aaPredicted RBP11.6□□□□□ -0.55
SMAD4-205ENST00000588745 RRP9O43818 475 aaKnown RBP11.6□□□□□ -0.55
SMAD4-205ENST00000588745 USP12O75317 370 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 MT-CYBP00156 380 aaPredicted RBP11.6□□□□□ -0.55
SMAD4-205ENST00000588745 CYBBP04839 570 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 GSTA2P09210 222 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 MGAT1P26572 445 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 STX2P32856 288 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 SLCO1A2P46721 670 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 SESN2P58004 480 aaPredicted RBP11.6□□□□□ -0.55
SMAD4-205ENST00000588745 MPP3Q13368 585 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 RFTN1Q14699 578 aaPredicted RBP11.6□□□□□ -0.55
SMAD4-205ENST00000588745 KLHL38Q2WGJ6 581 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 FSCBQ5H9T9 825 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 KCTD16Q68DU8 428 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 LEKR1Q6ZMV7 388 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 MFN1Q8IWA4 741 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 BBS5Q8N3I7 341 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 MPP5Q8N3R9 675 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 PGBD5Q8N414 524 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 RIBC1Q8N443 379 aaPredicted RBP11.6□□□□□ -0.55
SMAD4-205ENST00000588745 SH2D3CQ8N5H7 860 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.6□□□□□ -0.55
SMAD4-205ENST00000588745 IPMKQ8NFU5 416 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 ITFG1Q8TB96 612 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 DDI1Q8WTU0 396 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 STAMBPL1Q96FJ0 436 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 IMP4Q96G21 291 aaKnown RBP11.6□□□□□ -0.55
SMAD4-205ENST00000588745 TBL1YQ9BQ87 522 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 POLR1EQ9GZS1 481 aaKnown RBP11.6□□□□□ -0.55
SMAD4-205ENST00000588745 PPCSQ9HAB8 311 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 KIF9Q9HAQ2 790 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 HAUS2Q9NVX0 235 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 PIH1D1Q9NWS0 290 aaKnown RBP11.6□□□□□ -0.55
SMAD4-205ENST00000588745 SYBUQ9NX95 663 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 UBP1Q9NZI7 540 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 FETUBQ9UGM5 382 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 MAD1L1Q9Y6D9 718 aa11.6□□□□□ -0.55
SMAD4-205ENST00000588745 TCRBV9S1A1TA0A576 114 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 RGS16O15492 202 aaPredicted RBP11.59□□□□□ -0.55
SMAD4-205ENST00000588745 CDH16O75309 829 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 GLP2RO95838 553 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 PGAM1P18669 254 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 GLDCP23378 1020 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 ADRA1AP35348 466 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 CSKP41240 450 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 NUMBP49757 651 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 MAXP61244 160 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 CBX1P83916 185 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 ARF5P84085 180 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 DSC2Q02487 901 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 ITKQ08881 620 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 NIPAL4Q0D2K0 466 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 CDH17Q12864 832 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 RARS2Q5T160 578 aaKnown RBP11.59□□□□□ -0.55
SMAD4-205ENST00000588745 FYB2Q5VWT5 728 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 ALG1LQ6GMV1 187 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 POTEHQ6S545 545 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 KDELC1Q6UW63 502 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 UNC5AQ6ZN44 842 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 TPGS1Q6ZTW0 290 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 C3orf62Q6ZUJ4 267 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 TDRPQ86YL5 185 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 CCNJLQ8IV13 435 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 ARID3BQ8IVW6 561 aaPredicted RBP11.59□□□□□ -0.55
SMAD4-205ENST00000588745 CCDC117Q8IWD4 279 aaPredicted RBP11.59□□□□□ -0.55
SMAD4-205ENST00000588745 DNAAF3Q8N9W5 541 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 DCAF4L2Q8NA75 395 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 GSDMBQ8TAX9 411 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 ARRDC2Q8TBH0 407 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 WFDC5Q8TCV5 224 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 FBF1Q8TES7 1133 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 BHMTQ93088 406 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 TLCD1Q96CP7 247 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 ZSWIM3Q96MP5 696 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 XPO6Q96QU8 1125 aaKnown RBP11.59□□□□□ -0.55
SMAD4-205ENST00000588745 CYTH2Q99418 400 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 APOL2Q9BQE5 337 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 NAT9Q9BTE0 207 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 FICDQ9BVA6 458 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms