RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 FAM228BP0C875 321 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 ZNF883P0CG24 379 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 CHRNA3P32297 505 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 NUDT1P36639 197 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 ACVRL1P37023 503 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 NUMBP49757 651 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 METAP1P53582 386 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 RACK1P63244 317 aaKnown RBP10.71□□□□□ -0.69
TPM4-209ENST00000588483 GRIK2Q13002 908 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 SLC14A1Q13336 389 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 MAPK8IP2Q13387 824 aaPredicted RBP10.71□□□□□ -0.69
TPM4-209ENST00000588483 POLD3Q15054 466 aaPredicted RBP10.71□□□□□ -0.69
TPM4-209ENST00000588483 ASTE1Q2TB18 679 aaPredicted RBP10.71□□□□□ -0.69
TPM4-209ENST00000588483 PARP15Q460N3 678 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 ACCSLQ4AC99 568 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 ERMARDQ5T6L9 678 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 SCYL2Q6P3W7 929 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 ALKBH5Q6P6C2 394 aaKnown RBP10.71□□□□□ -0.69
TPM4-209ENST00000588483 NCEH1Q6PIU2 408 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 IL27RAQ6UWB1 636 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 LINGO4Q6UY18 593 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 PIP4P1Q86T03 277 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 VSTM4Q8IW00 320 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 HDDC3Q8N4P3 179 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 MINDY1Q8N5J2 469 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 CASKIN2Q8WXE0 1202 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 VOPP1Q96AW1 172 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 PEBP4Q96S96 227 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 SNRNP25Q9BV90 132 aaKnown RBP10.71□□□□□ -0.69
TPM4-209ENST00000588483 DNAI1Q9UI46 699 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 AP4E1Q9UPM8 1137 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 FARP1Q9Y4F1 1045 aaPredicted RBP10.71□□□□□ -0.69
TPM4-209ENST00000588483 SPEGQ15772 3267 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 MED19A0JLT2 244 aaPredicted RBP10.7□□□□□ -0.7
TPM4-209ENST00000588483 PRPSAP2O60256 369 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 OPHN1O60890 802 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 GSRP00390 522 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 ADRB1P08588 477 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 CEACAM1P13688 526 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 MIPP30301 263 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 HCAR3P49019 387 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 BNC1Q01954 994 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 CNTN1Q12860 1018 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 SERINC3Q13530 473 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 PIGHQ14442 188 aaPredicted RBP10.7□□□□□ -0.7
TPM4-209ENST00000588483 DPYSL2Q16555 572 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 INO80DQ53TQ3 878 aaPredicted RBP10.7□□□□□ -0.7
TPM4-209ENST00000588483 PPM1JQ5JR12 505 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 PIP5KL1Q5T9C9 394 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 AFMIDQ63HM1 303 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 NEK5Q6P3R8 708 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 SARM1Q6SZW1 724 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 DPY19L3Q6ZPD9 716 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 TRIM69Q86WT6 500 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 OR8K1Q8NGG5 319 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 GANCQ8TET4 914 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 CPLX3Q8WVH0 158 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 LRIG1Q96JA1 1093 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 SPON2Q9BUD6 331 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 HDAC8Q9BY41 377 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 THAP2Q9H0W7 228 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 LRRC19Q9H756 370 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 EBF2Q9HAK2 575 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 PREBQ9HCU5 417 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 TM9SF3Q9HD45 589 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 IL36AQ9UHA7 158 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 HPCAL4Q9UM19 191 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 SLCO1B1Q9Y6L6 691 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 WASF2Q9Y6W5 498 aa10.7□□□□□ -0.7
TPM4-209ENST00000588483 TP53BP1Q12888 1972 aaPredicted RBP10.69□□□□□ -0.7
TPM4-209ENST00000588483 CREB3O43889 395 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 MFAP3LO75121 409 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 FSBPO95073 299 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 KCNK5O95279 499 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 CER1O95813 267 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 ITGB7P26010 798 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 MAPK8P45983 427 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 RECQLP46063 649 aaPredicted RBP10.69□□□□□ -0.7
TPM4-209ENST00000588483 CCNHP51946 323 aaPredicted RBP10.69□□□□□ -0.7
TPM4-209ENST00000588483 NDST2P52849 883 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 ATXN3P54252 364 aaPredicted RBP10.69□□□□□ -0.7
TPM4-209ENST00000588483 TAS2R38P59533 333 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 TPI1P60174 286 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 CCDC15Q0P6D6 951 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 DPYSQ14117 519 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 SLC18A3Q16572 532 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 CA9Q16790 459 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 BOLA3Q53S33 107 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 CARD16Q5EG05 197 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 DBX2Q6ZNG2 339 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 RFX8Q6ZV50 586 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 CHST14Q8NCH0 376 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 OR2AP1Q8NGE2 309 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 OR14C36Q8NHC7 312 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 TEKT4Q8WW24 435 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 SNX19Q92543 992 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 PPP1R16AQ96I34 528 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 KCTD15Q96SI1 283 aaPredicted RBP10.69□□□□□ -0.7
TPM4-209ENST00000588483 HEPHQ9BQS7 1158 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms