RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.57□□□□□ -0.24
SMARCA4-210ENST00000586892 SPTLC3Q9NUV7 552 aa13.57□□□□□ -0.24
SMARCA4-210ENST00000586892 SERGEFQ9UGK8 458 aa13.57□□□□□ -0.24
SMARCA4-210ENST00000586892 CDV3Q9UKY7 258 aaKnown RBP13.57□□□□□ -0.24
SMARCA4-210ENST00000586892 ATXN2Q99700 1313 aaKnown RBP13.57□□□□□ -0.24
SMARCA4-210ENST00000586892 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 LNP1A1A4G5 178 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 PATE3B3GLJ2 98 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 RASA4BC9J798 803 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 SLC7A4O43246 635 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 RASA4O43374 803 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 ZNF821O75541 412 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 CD160O95971 181 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 PRNPP04156 253 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 GNSP15586 552 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 TCF4P15884 667 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 CHRNA3P32297 505 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 DRD3P35462 400 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 ARL4AP40617 200 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 ID4P47928 161 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 LIMK1P53667 647 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 SLC25A11Q02978 314 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 SERINC3Q13530 473 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 HADHQ16836 314 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 RSPO4Q2I0M5 234 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 SMTNL2Q2TAL5 461 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 TRIM61Q5EBN2 209 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 KCNT1Q5JUK3 1230 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 PLPP6Q8IY26 295 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 TMIEQ8NEW7 156 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 PIP4K2CQ8TBX8 421 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 CASKIN2Q8WXE0 1202 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 HSPH1Q92598 858 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 FAM131CQ96AQ9 280 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 HMCESQ96FZ2 354 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 NEUROG2Q9H2A3 272 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 TNKS2Q9H2K2 1166 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 C6orf106Q9H6K1 298 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 LRRC19Q9H756 370 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 SARDHQ9UL12 918 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 INTUQ9ULD6 942 aa13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-210ENST00000586892 LRRC72A6NJI9 287 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 H3BRJ5 948 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 BUB1O43683 1085 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 GDF9O60383 454 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 PROSCO94903 275 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 CFIP05156 583 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 SERPINF2P08697 491 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 RARAP10276 462 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 ERCC2P18074 760 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 MAN1A1P33908 653 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 ADPRHP54922 357 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 CCDC15Q0P6D6 951 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 DPYSQ14117 519 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 INO80DQ53TQ3 878 aaPredicted RBP13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 CARD16Q5EG05 197 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 DPY19L3Q6ZPD9 716 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 POLNQ7Z5Q5 900 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 RHOT2Q8IXI1 618 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 CCDC170Q8IYT3 715 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 LZTR1Q8N653 840 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 OR2T34Q8NGX1 318 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 RMDN1Q96DB5 314 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 PANX2Q96RD6 677 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 EDEM2Q9BV94 578 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 KDM4CQ9H3R0 1056 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 RXFP3Q9NSD7 469 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 DLL3Q9NYJ7 618 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 CWC15Q9P013 229 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 IL36AQ9UHA7 158 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 TPX2Q9ULW0 747 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 SLC6A14Q9UN76 642 aa13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 FCF1Q9Y324 198 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-210ENST00000586892 A0A1B0GTW7 788 aa13.54□□□□□ -0.24
SMARCA4-210ENST00000586892 FAM47DPA6NHR8 397 aa13.54□□□□□ -0.24
SMARCA4-210ENST00000586892 ARHGAP42A6NI28 874 aa13.54□□□□□ -0.24
SMARCA4-210ENST00000586892 KPNA3O00505 521 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-210ENST00000586892 GSRP00390 522 aa13.54□□□□□ -0.24
SMARCA4-210ENST00000586892 CTSLP07711 333 aa13.54□□□□□ -0.24
SMARCA4-210ENST00000586892 MAOBP27338 520 aa13.54□□□□□ -0.24
SMARCA4-210ENST00000586892 SSR1P43307 286 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-210ENST00000586892 DNA2P51530 1060 aa13.54□□□□□ -0.24
SMARCA4-210ENST00000586892 CCNHP51946 323 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-210ENST00000586892 METAP1P53582 386 aa13.54□□□□□ -0.24
SMARCA4-210ENST00000586892 SNRPD1P62314 119 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-210ENST00000586892 IRX4P78413 519 aa13.54□□□□□ -0.24
SMARCA4-210ENST00000586892 PUM1Q14671 1186 aaKnown RBP eCLIP13.54□□□□□ -0.242e-6■□□□□ 9.9
SMARCA4-210ENST00000586892 AFMIDQ63HM1 303 aa13.54□□□□□ -0.24
SMARCA4-210ENST00000586892 KIAA0895LQ68EN5 471 aa13.54□□□□□ -0.24
SMARCA4-210ENST00000586892 TXNRD3NBQ6F5E7 133 aa13.54□□□□□ -0.24
SMARCA4-210ENST00000586892 NCEH1Q6PIU2 408 aa13.54□□□□□ -0.24
SMARCA4-210ENST00000586892 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-210ENST00000586892 CHST14Q8NCH0 376 aa13.54□□□□□ -0.24
SMARCA4-210ENST00000586892 OR2AP1Q8NGE2 309 aa13.54□□□□□ -0.24
SMARCA4-210ENST00000586892 OR14C36Q8NHC7 312 aa13.54□□□□□ -0.24
SMARCA4-210ENST00000586892 SLC35G2Q8TBE7 412 aa13.54□□□□□ -0.24
SMARCA4-210ENST00000586892 RFFLQ8WZ73 363 aa13.54□□□□□ -0.24
SMARCA4-210ENST00000586892 SNX19Q92543 992 aa13.54□□□□□ -0.24
SMARCA4-210ENST00000586892 BIRC7Q96CA5 298 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms