RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 PGAM1P18669 254 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 IVDP26440 423 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 OAS2P29728 719 aaKnown RBP6.3□□□□□ -1.4
LIG3-206ENST00000586058 NNMTP40261 264 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 MAGEA6P43360 314 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 MAPK8P45983 427 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 RPS24P62847 133 aaKnown RBP6.3□□□□□ -1.4
LIG3-206ENST00000586058 SULT2A1Q06520 285 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 USP4Q13107 963 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 SLC29A2Q14542 456 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 E2F5Q15329 346 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 TRADDQ15628 312 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 PREPLQ4J6C6 727 aaPredicted RBP6.3□□□□□ -1.4
LIG3-206ENST00000586058 SYCP2LQ5T4T6 812 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 LGSNQ5TDP6 509 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 ARMC3Q5W041 872 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 AFMIDQ63HM1 303 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 LRRC8BQ6P9F7 803 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 TMC5Q6UXY8 1006 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 Q6ZNB5 142 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 CAPN12Q6ZSI9 719 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 TPGS1Q6ZTW0 290 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 NUDT18Q6ZVK8 323 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 ADGRD2Q7Z7M1 963 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 TMEM150AQ86TG1 271 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 PRUNE1Q86TP1 453 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 ANKMY2Q8IV38 441 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 ARHGAP12Q8IWW6 846 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 FAM217AQ8IXS0 508 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 KIAA1958Q8N8K9 716 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 DCAF4L2Q8NA75 395 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 FBXO36Q8NEA4 188 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 IPMKQ8NFU5 416 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 VN1R2Q8NFZ6 395 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 FAM76AQ8TAV0 307 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 ZSCAN18Q8TBC5 510 aaPredicted RBP6.3□□□□□ -1.4
LIG3-206ENST00000586058 ING5Q8WYH8 240 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 ARHGEF2Q92974 986 aaKnown RBP6.3□□□□□ -1.4
LIG3-206ENST00000586058 ATP2A3Q93084 1043 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 ACDQ96AP0 544 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 STAMBPL1Q96FJ0 436 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 CFAP36Q96G28 342 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 C9orf72Q96LT7 481 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 TEKT5Q96M29 485 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 PRICKLE1Q96MT3 831 aaPredicted RBP6.3□□□□□ -1.4
LIG3-206ENST00000586058 SERPINB12Q96P63 405 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 FCRL5Q96RD9 977 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 CYP2S1Q96SQ9 504 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 GAS2L1Q99501 681 aaPredicted RBP6.3□□□□□ -1.4
LIG3-206ENST00000586058 IL12RB2Q99665 862 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 TBL1YQ9BQ87 522 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 BBS2Q9BXC9 721 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 LRRC3Q9BY71 257 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 ROPN1BQ9BZX4 212 aaPredicted RBP6.3□□□□□ -1.4
LIG3-206ENST00000586058 IL22Q9GZX6 179 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 ROPN1Q9HAT0 212 aaPredicted RBP6.3□□□□□ -1.4
LIG3-206ENST00000586058 GLOD4Q9HC38 313 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 ZNF446Q9NWS9 450 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 NINJ2Q9NZG7 142 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 LMCD1Q9NZU5 365 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 KIAA1522Q9P206 1035 aaPredicted RBP6.3□□□□□ -1.4
LIG3-206ENST00000586058 DNMT3BQ9UBC3 853 aaKnown RBP6.3□□□□□ -1.4
LIG3-206ENST00000586058 ZC3H7BQ9UGR2 993 aaKnown RBP6.3□□□□□ -1.4
LIG3-206ENST00000586058 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.3□□□□□ -1.4
LIG3-206ENST00000586058 FAM169AQ9Y6X4 670 aa6.3□□□□□ -1.4
LIG3-206ENST00000586058 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.29□□□□□ -1.4
LIG3-206ENST00000586058 TLDC2A0PJX2 215 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 SDR42E2A6NKP2 422 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 E7ESA3 106 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 TRDMT1O14717 391 aaKnown RBP6.29□□□□□ -1.4
LIG3-206ENST00000586058 ZBTB24O43167 697 aaPredicted RBP6.29□□□□□ -1.4
LIG3-206ENST00000586058 MAP3K7O43318 606 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 KDELR3O43731 214 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 PRAMEF11O60813 436 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 RNF40O75150 1001 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 SASH3O75995 380 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 ARHGEF15O94989 841 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 METTL18O95568 372 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 IGSF6O95976 241 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 HLA-DQB2P05538 268 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 INHBAP08476 426 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 CEBPBP17676 345 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 ELK3P41970 407 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 MTHFRP42898 656 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 RECQLP46063 649 aaPredicted RBP6.29□□□□□ -1.4
LIG3-206ENST00000586058 NPY2RP49146 381 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 RHOAP61586 193 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 RAD51Q06609 339 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 WASHC5Q12768 1159 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 ZBTB17Q13105 803 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 NAB1Q13506 487 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 CAMK1Q14012 370 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 DMC1Q14565 340 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 SLC14A2Q15849 920 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 UAP1Q16222 522 aaPredicted RBP6.29□□□□□ -1.4
LIG3-206ENST00000586058 PCSK7Q16549 785 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 KYNUQ16719 465 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 SKIDA1Q1XH10 827 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 RALGPS1Q5JS13 557 aa6.29□□□□□ -1.4
LIG3-206ENST00000586058 PRSS36Q5K4E3 855 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms