RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 RCOR3Q9P2K3 495 aaPredicted RBP15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 STOML1Q9UBI4 398 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 DCTN4Q9UJW0 460 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 TLR6Q9Y2C9 796 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 SNX10Q9Y5X0 201 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 ANAPC1Q9H1A4 1944 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 A0A0G2JND7 137 aa15.28■□□□□ 0.04
CDK5RAP3-236ENST00000584991 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.28■□□□□ 0.04
CDK5RAP3-236ENST00000584991 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.28■□□□□ 0.04
CDK5RAP3-236ENST00000584991 FAM159BA6NKW6 160 aa15.28■□□□□ 0.04
CDK5RAP3-236ENST00000584991 H3BRJ5 948 aa15.28■□□□□ 0.04
CDK5RAP3-236ENST00000584991 EEF2KO00418 725 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP3-236ENST00000584991 PPP1R12AO14974 1030 aaPredicted RBP15.28■□□□□ 0.04
CDK5RAP3-236ENST00000584991 GSC2O15499 205 aa15.28■□□□□ 0.04
CDK5RAP3-236ENST00000584991 LRG1P02750 347 aa15.28■□□□□ 0.04
CDK5RAP3-236ENST00000584991 C8AP07357 584 aa15.28■□□□□ 0.04
CDK5RAP3-236ENST00000584991 AMPD1P23109 780 aa15.28■□□□□ 0.04
CDK5RAP3-236ENST00000584991 RBL1P28749 1068 aa15.28■□□□□ 0.04
CDK5RAP3-236ENST00000584991 CLCN4P51793 760 aa15.28■□□□□ 0.04
CDK5RAP3-236ENST00000584991 TBX4P57082 545 aa15.28■□□□□ 0.04
CDK5RAP3-236ENST00000584991 SNX30Q5VWJ9 437 aa15.28■□□□□ 0.04
CDK5RAP3-236ENST00000584991 C1orf228Q6PIY5 440 aa15.28■□□□□ 0.04
CDK5RAP3-236ENST00000584991 ITIH5Q86UX2 942 aa15.28■□□□□ 0.04
CDK5RAP3-236ENST00000584991 OXNAD1Q96HP4 312 aaPredicted RBP15.28■□□□□ 0.04
CDK5RAP3-236ENST00000584991 NKX2-4Q9H2Z4 354 aa15.28■□□□□ 0.04
CDK5RAP3-236ENST00000584991 H3BNC9 293 aa15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 GYG2O15488 501 aa15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 RFPL1O75677 317 aa15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 MOCS2O96007 188 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 FDFT1P37268 417 aa15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 PPP2R5DQ14738 602 aa15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 NAA25Q14CX7 972 aa15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 TSNAXIP1Q2TAA8 658 aa15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 KYAT3Q6YP21 454 aaKnown RBP15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 PPM1NQ8N819 430 aa15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 TTC17Q96AE7 1141 aa15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 E2F7Q96AV8 911 aa15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 SLC39A13Q96H72 371 aa15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 FCRL2Q96LA5 508 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 SIGLEC10Q96LC7 697 aa15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 ZNF570Q96NI8 536 aa15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 FERMT1Q9BQL6 677 aa15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 NAT9Q9BTE0 207 aa15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 CADM1Q9BY67 442 aaKnown RBP15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 SIK2Q9H0K1 926 aa15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 WWP1Q9H0M0 922 aa15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 STN1Q9H668 368 aaKnown RBP15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 DENND2DQ9H6A0 471 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 ZNF334Q9HCZ1 680 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 UXTQ9UBK9 157 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 OR12D3Q9UGF7 316 aa15.27■□□□□ 0.04
CDK5RAP3-236ENST00000584991 SLC12A8A0AV02 714 aa15.27■□□□□ 0.03
CDK5RAP3-236ENST00000584991 KCNU1A8MYU2 1149 aa15.27■□□□□ 0.03
CDK5RAP3-236ENST00000584991 MAGEC1O60732 1142 aa15.27■□□□□ 0.03
CDK5RAP3-236ENST00000584991 PAGE1O75459 146 aa15.27■□□□□ 0.03
CDK5RAP3-236ENST00000584991 ALDH1A2O94788 518 aa15.27■□□□□ 0.03
CDK5RAP3-236ENST00000584991 APRTP07741 180 aa15.27■□□□□ 0.03
CDK5RAP3-236ENST00000584991 HMBSP08397 361 aa15.27■□□□□ 0.03
CDK5RAP3-236ENST00000584991 ESRRAP11474 423 aaPredicted RBP15.27■□□□□ 0.03
CDK5RAP3-236ENST00000584991 ATP5C1P36542 298 aaKnown RBP15.27■□□□□ 0.03
CDK5RAP3-236ENST00000584991 SEMA3BQ13214 749 aa15.27■□□□□ 0.03
CDK5RAP3-236ENST00000584991 SEMA5AQ13591 1074 aa15.27■□□□□ 0.03
CDK5RAP3-236ENST00000584991 TAF11Q15544 211 aa15.27■□□□□ 0.03
CDK5RAP3-236ENST00000584991 TRIP4Q15650 581 aaPredicted RBP15.27■□□□□ 0.03
CDK5RAP3-236ENST00000584991 ZRSR2Q15696 482 aaKnown RBP15.27■□□□□ 0.03
CDK5RAP3-236ENST00000584991 HECTD3Q5T447 861 aa15.27■□□□□ 0.03
CDK5RAP3-236ENST00000584991 TMPRSS6Q8IU80 811 aa15.27■□□□□ 0.03
CDK5RAP3-236ENST00000584991 CTAGE3PQ8IX95 158 aa15.27■□□□□ 0.03
CDK5RAP3-236ENST00000584991 HAPLN3Q96S86 360 aa15.27■□□□□ 0.03
CDK5RAP3-236ENST00000584991 KLF6Q99612 283 aaPredicted RBP15.27■□□□□ 0.03
CDK5RAP3-236ENST00000584991 FAM96AQ9H5X1 160 aa15.27■□□□□ 0.03
CDK5RAP3-236ENST00000584991 EIF2B3Q9NR50 452 aaKnown RBP15.27■□□□□ 0.03
CDK5RAP3-236ENST00000584991 ARHGEF4Q9NR80 690 aa15.27■□□□□ 0.03
CDK5RAP3-236ENST00000584991 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.27■□□□□ 0.038e-10■■■□□ 15.9
CDK5RAP3-236ENST00000584991 ASB3Q9Y575 518 aa15.27■□□□□ 0.03
CDK5RAP3-236ENST00000584991 HEY1Q9Y5J3 304 aa15.27■□□□□ 0.03
CDK5RAP3-236ENST00000584991 OBSL1O75147 1896 aa15.26■□□□□ 0.03
CDK5RAP3-236ENST00000584991 F8W8V4 182 aa15.26■□□□□ 0.03
CDK5RAP3-236ENST00000584991 ATP6V1C1P21283 382 aa15.26■□□□□ 0.03
CDK5RAP3-236ENST00000584991 BGNP21810 368 aa15.26■□□□□ 0.03
CDK5RAP3-236ENST00000584991 SERPINB3P29508 390 aa15.26■□□□□ 0.03
CDK5RAP3-236ENST00000584991 TPI1P60174 286 aa15.26■□□□□ 0.03
CDK5RAP3-236ENST00000584991 OVGP1Q12889 678 aa15.26■□□□□ 0.03
CDK5RAP3-236ENST00000584991 BLMHQ13867 455 aa15.26■□□□□ 0.03
CDK5RAP3-236ENST00000584991 RFX8Q6ZV50 586 aa15.26■□□□□ 0.03
CDK5RAP3-236ENST00000584991 TMEM150AQ86TG1 271 aa15.26■□□□□ 0.03
CDK5RAP3-236ENST00000584991 PRPF39Q86UA1 669 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-236ENST00000584991 CFAP36Q96G28 342 aa15.26■□□□□ 0.03
CDK5RAP3-236ENST00000584991 QKIQ96PU8 341 aaKnown RBP eCLIP15.26■□□□□ 0.03
CDK5RAP3-236ENST00000584991 CDK5RAP1Q96SZ6 601 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-236ENST00000584991 NACA2Q9H009 215 aa15.26■□□□□ 0.03
CDK5RAP3-236ENST00000584991 OSBPL2Q9H1P3 480 aa15.26■□□□□ 0.03
CDK5RAP3-236ENST00000584991 MOCS1Q9NZB8 636 aa15.26■□□□□ 0.03
CDK5RAP3-236ENST00000584991 CHD7Q9P2D1 2997 aa15.26■□□□□ 0.03
CDK5RAP3-236ENST00000584991 MSRAQ9UJ68 235 aa15.26■□□□□ 0.03
CDK5RAP3-236ENST00000584991 DNMT3LQ9UJW3 386 aa15.26■□□□□ 0.03
CDK5RAP3-236ENST00000584991 MFHAS1Q9Y4C4 1052 aa15.26■□□□□ 0.03
CDK5RAP3-236ENST00000584991 CCL16O15467 120 aa15.25■□□□□ 0.03
CDK5RAP3-236ENST00000584991 COCHO43405 550 aa15.25■□□□□ 0.03
CDK5RAP3-236ENST00000584991 AVILO75366 819 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms