RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 CNTN5O94779 1100 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 ALDOAP04075 364 aaKnown RBP11.47□□□□□ -0.57
TOP3A-217ENST00000584582 CCDC166P0CW27 439 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 SKIP12755 728 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 TPSB2P20231 275 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 GRIA4P48058 902 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 GEMP55040 296 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 PDAP1Q13442 181 aaKnown RBP11.47□□□□□ -0.57
TOP3A-217ENST00000584582 TPSAB1Q15661 275 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 ZRANB3Q5FWF4 1079 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 SPANXN3Q5MJ09 141 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 LINGO4Q6UY18 593 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 CXorf38Q8TB03 319 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 DDX50Q9BQ39 737 aaKnown RBP11.47□□□□□ -0.57
TOP3A-217ENST00000584582 TM6SF2Q9BZW4 377 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 PHACTR1Q9C0D0 580 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 SENP6Q9GZR1 1112 aaPredicted RBP11.47□□□□□ -0.57
TOP3A-217ENST00000584582 KATNBL1Q9H079 304 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 ABCG8Q9H221 673 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 ALG9Q9H6U8 611 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 TCF7L2Q9NQB0 619 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 PFDN4Q9NQP4 134 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 TAGLN3Q9UI15 199 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 C15orf41Q9Y2V0 281 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 CDY1Q9Y6F8 540 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 NCAM2O15394 837 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 MGRN1O60291 552 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 AP2A1O95782 977 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 CHRM3P20309 590 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 PTDSS1P48651 473 aaKnown RBP11.47□□□□□ -0.57
TOP3A-217ENST00000584582 ABCE1P61221 599 aaKnown RBP11.47□□□□□ -0.57
TOP3A-217ENST00000584582 FAM83EQ2M2I3 478 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 TMCO2Q7Z6W1 182 aaPredicted RBP11.47□□□□□ -0.57
TOP3A-217ENST00000584582 LINC00523Q86TU6 105 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 SNX32Q86XE0 403 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 DENND1CQ8IV53 801 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 CDC26Q8NHZ8 85 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 FBXO27Q8NI29 283 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 SH3TC2Q8TF17 1288 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 NMUR1Q9HB89 426 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 DLGAP2Q9P1A6 1054 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 E5RI56 91 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 E7ESA3 106 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 GSC2O15499 205 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 TLR5O60602 858 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 WEE1P30291 646 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 NFE2Q16621 373 aaPredicted RBP11.46□□□□□ -0.57
TOP3A-217ENST00000584582 GRTP1Q5TC63 336 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 RASIP1Q5U651 963 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 SEL1L3Q68CR1 1132 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 SAPCD2Q86UD0 394 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 SUGP1Q8IWZ8 645 aaKnown RBP11.46□□□□□ -0.57
TOP3A-217ENST00000584582 HOMEZQ8IX15 550 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 ACVR1CQ8NER5 493 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 ZSCAN18Q8TBC5 510 aaPredicted RBP11.46□□□□□ -0.57
TOP3A-217ENST00000584582 PPP1R10Q96QC0 940 aaKnown RBP11.46□□□□□ -0.57
TOP3A-217ENST00000584582 BEGAINQ9BUH8 593 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 IL22Q9GZX6 179 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 CXorf56Q9H5V9 222 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 RNPEPL1Q9HAU8 725 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 CCDC167Q9P0B6 97 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 COPG2Q9UBF2 871 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 TRIP11Q15643 1979 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 A0A0U1RQS6 177 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 MBLAC1A4D2B0 266 aaPredicted RBP11.46□□□□□ -0.57
TOP3A-217ENST00000584582 TMEM233B4DJY2 109 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 E9PAM4 449 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 OR1D2P34982 312 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 CD151P48509 253 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 HARS2P49590 506 aaKnown RBP11.46□□□□□ -0.57
TOP3A-217ENST00000584582 POLE2P56282 527 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 SLC10A7Q0GE19 358 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 UGP2Q16851 508 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 PKDCCQ504Y2 493 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 CCNJLQ8IV13 435 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 CARNMT1Q8N4J0 409 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 PCDH20Q8N6Y1 951 aaKnown RBP11.46□□□□□ -0.57
TOP3A-217ENST00000584582 SCG3Q8WXD2 468 aaKnown RBP11.46□□□□□ -0.57
TOP3A-217ENST00000584582 ESAMQ96AP7 390 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 MAF1Q9H063 256 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 FAM96AQ9H5X1 160 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 FBXO5Q9UKT4 447 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 KCTD3Q9Y597 815 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 PTCH2Q9Y6C5 1203 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 WASF2Q9Y6W5 498 aa11.46□□□□□ -0.57
TOP3A-217ENST00000584582 PABPN1LA6NDY0 278 aaKnown RBP11.46□□□□□ -0.58
TOP3A-217ENST00000584582 F5H5T6 163 aa11.46□□□□□ -0.58
TOP3A-217ENST00000584582 PGFP49763 221 aa11.46□□□□□ -0.58
TOP3A-217ENST00000584582 STX1BP61266 288 aa11.46□□□□□ -0.58
TOP3A-217ENST00000584582 LPIN1Q14693 890 aa11.46□□□□□ -0.58
TOP3A-217ENST00000584582 SGO1Q5FBB7 561 aa11.46□□□□□ -0.58
TOP3A-217ENST00000584582 VARS2Q5ST30 1063 aaKnown RBP11.46□□□□□ -0.58
TOP3A-217ENST00000584582 TREML1Q86YW5 311 aa11.46□□□□□ -0.58
TOP3A-217ENST00000584582 RELL1Q8IUW5 271 aa11.46□□□□□ -0.58
TOP3A-217ENST00000584582 NUP93Q8N1F7 819 aa11.46□□□□□ -0.58
TOP3A-217ENST00000584582 LINC01465Q8N7H1 131 aa11.46□□□□□ -0.58
TOP3A-217ENST00000584582 ATP6V0D2Q8N8Y2 350 aa11.46□□□□□ -0.58
TOP3A-217ENST00000584582 TRPV1Q8NER1 839 aa11.46□□□□□ -0.58
TOP3A-217ENST00000584582 LPCAT1Q8NF37 534 aa11.46□□□□□ -0.58
TOP3A-217ENST00000584582 OR7D4Q8NG98 312 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms