RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 AMACRQ9UHK6 382 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 FBXL21Q9UKT6 434 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 HS3ST2Q9Y278 367 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 STARD13Q9Y3M8 1113 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 NEU2Q9Y3R4 380 aa9.71□□□□□ -0.86
RFFL-210ENST00000582308 CTAGE15A4D2H0 777 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 CFAP69A5D8W1 941 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 C5orf60A6NFR6 353 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 SGK1O00141 431 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 MAN2B1O00754 1011 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 MUSKO15146 869 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 ATP9BO43861 1147 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 ZNF821O75541 412 aaPredicted RBP9.7□□□□□ -0.86
RFFL-210ENST00000582308 GCATO75600 419 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 TMCC1O94876 653 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 SRPRAP08240 638 aaKnown RBP9.7□□□□□ -0.86
RFFL-210ENST00000582308 ZSCAN5DPP0CG00 497 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 CTAGE8P0CG41 777 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 SRCP12931 536 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 HNRNPLP14866 589 aaKnown RBP eCLIP9.7□□□□□ -0.86
RFFL-210ENST00000582308 DRD1P21728 446 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 STIP1P31948 543 aaKnown RBP9.7□□□□□ -0.86
RFFL-210ENST00000582308 CD68P34810 354 aaPredicted RBP9.7□□□□□ -0.86
RFFL-210ENST00000582308 KIR2DL1P43626 348 aaPredicted RBP9.7□□□□□ -0.86
RFFL-210ENST00000582308 MMP13P45452 471 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 RENBPP51606 427 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 GEMIN4P57678 1058 aaKnown RBP9.7□□□□□ -0.86
RFFL-210ENST00000582308 STARD6P59095 220 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 MRPS25P82663 173 aaKnown RBP9.7□□□□□ -0.86
RFFL-210ENST00000582308 ZXDAP98168 799 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 GRSF1Q12849 480 aaKnown RBP eCLIP9.7□□□□□ -0.86
RFFL-210ENST00000582308 CCINQ13939 588 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 ZNF234Q14588 700 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 RFTN1Q14699 578 aaPredicted RBP9.7□□□□□ -0.86
RFFL-210ENST00000582308 TEX44Q53QW1 395 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 DGKKQ5KSL6 1271 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 MARC1Q5VT66 337 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 EGFLAMQ63HQ2 1017 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 ZNF852Q6ZMS4 543 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 NUDT18Q6ZVK8 323 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 CTAGE6Q86UF2 777 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 CTAGE4Q8IX94 777 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 CCDC105Q8IYK2 499 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 ZNF567Q8N184 647 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 SIX5Q8N196 739 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 MMGT1Q8N4V1 131 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 ATP11CQ8NB49 1132 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 TSEN2Q8NCE0 465 aaKnown RBP9.7□□□□□ -0.86
RFFL-210ENST00000582308 CCDC110Q8TBZ0 833 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 FRS2Q8WU20 508 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 NSMCE1Q8WV22 266 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 SLCO2A1Q92959 643 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 EXOC4Q96A65 974 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 TEKT5Q96M29 485 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 CCDC114Q96M63 670 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 AGAP3Q96P47 875 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 ACOX2Q99424 681 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 NT5MQ9NPB1 228 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 ZDHHC4Q9NPG8 344 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 RBM22Q9NW64 420 aaKnown RBP eCLIP9.7□□□□□ -0.86
RFFL-210ENST00000582308 THAP10Q9P2Z0 257 aaPredicted RBP9.7□□□□□ -0.86
RFFL-210ENST00000582308 LHX3Q9UBR4 397 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 FEZ2Q9UHY8 353 aaPredicted RBP9.7□□□□□ -0.86
RFFL-210ENST00000582308 SLC25A13Q9UJS0 675 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 NDRG2Q9UN36 371 aaKnown RBP9.7□□□□□ -0.86
RFFL-210ENST00000582308 PLA2G4CQ9UP65 541 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 ATP8A1Q9Y2Q0 1164 aa9.7□□□□□ -0.86
RFFL-210ENST00000582308 FCF1Q9Y324 198 aaKnown RBP9.7□□□□□ -0.86
RFFL-210ENST00000582308 TTC34A8MYJ7 566 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 WASH3PC4AMC7 463 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 TTI1O43156 1089 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 ZBTB24O43167 697 aaPredicted RBP9.69□□□□□ -0.86
RFFL-210ENST00000582308 RAD51CO43502 376 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 OPHN1O60890 802 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 GJB3O75712 270 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 IFNB1P01574 187 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 HLA-DQB2P05538 268 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 TARSP26639 723 aaKnown RBP9.69□□□□□ -0.86
RFFL-210ENST00000582308 RPL22P35268 128 aaKnown RBP9.69□□□□□ -0.86
RFFL-210ENST00000582308 TIE1P35590 1138 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 RGRP47804 291 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 SEC13P55735 322 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 DR1Q01658 176 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 LMNB2Q03252 620 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 FZD5Q13467 585 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 IHHQ14623 411 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 TRIP13Q15645 432 aaPredicted RBP9.69□□□□□ -0.86
RFFL-210ENST00000582308 DLG2Q15700 870 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 FNDC3BQ53EP0 1204 aaKnown RBP9.69□□□□□ -0.86
RFFL-210ENST00000582308 ANKRD20A2Q5SQ80 823 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 ANKRD20A1Q5TYW2 823 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 ANKRD20A3Q5VUR7 823 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 GSTA5Q7RTV2 222 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 PID1Q7Z2X4 250 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 ZNF366Q8N895 744 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 GRK7Q8WTQ7 553 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 UCMAQ8WVF2 138 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 CASKIN2Q8WXE0 1202 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 ISG20Q96AZ6 181 aaKnown RBP9.69□□□□□ -0.86
RFFL-210ENST00000582308 SHDQ96IW2 340 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms