RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 CFAP69A5D8W1 941 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 TAC1P20366 129 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 UBE3AQ05086 875 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 CRYMQ14894 314 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 PRKD1Q15139 912 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 SEPT7Q16181 437 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ANKRD20A2Q5SQ80 823 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ANKRD20A1Q5TYW2 823 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ANKRD20A3Q5VUR7 823 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 TMC5Q6UXY8 1006 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 SPATA21Q7Z572 469 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 TDRPQ86YL5 185 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 CTAGE3PQ8IX95 158 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ZNF567Q8N184 647 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 RIN3Q8TB24 985 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 MRPS31Q92665 395 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ZYG11BQ9C0D3 744 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ACSS3Q9H6R3 686 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ASAH2Q9NR71 780 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 SLC12A4Q9UP95 1085 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 HBS1LQ9Y450 684 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 TTLL3Q9Y4R7 772 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ACTL7AQ9Y615 435 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ZFP37Q9Y6Q3 630 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 E7ESA3 106 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 SMAPO00193 183 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 CHADO15335 359 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 JCHAINP01591 159 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 RHOP08100 348 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 PAX7P23759 505 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 HOXC13P31276 330 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 PAPOLAP51003 745 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 TEAD2Q15562 447 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 SLC1A5Q15758 541 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ACCSLQ4AC99 568 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 PID1Q7Z2X4 250 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ZNF354CQ86Y25 554 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ELMOD1Q8N336 334 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 RTL3Q8N8U3 475 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 CCDC63Q8NA47 563 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 VN1R2Q8NFZ6 395 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 SHKBP1Q8TBC3 707 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 CCDC97Q96F63 343 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 PRICKLE1Q96MT3 831 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 CATSPERBQ9H7T0 1116 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 UBP1Q9NZI7 540 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 STK38LQ9Y2H1 464 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 L3MBTL1Q9Y468 752 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 MAD1L1Q9Y6D9 718 aa12.93□□□□□ -0.34
CDK5RAP3-217ENST00000580287 A0A0D9SEW6 157 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 J3KR12 359 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 MOSPD3O75425 235 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 GALNT2Q10471 571 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ITIH4Q14624 930 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 KBTBD12Q3ZCT8 623 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 PABPC1LQ4VXU2 614 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 KLHDC10Q6PID8 442 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 HMCESQ96FZ2 354 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ZSWIM3Q96MP5 696 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 CDK5RAP1Q96SZ6 601 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 CYTH2Q99418 400 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 TRIM56Q9BRZ2 755 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 TLE6Q9H808 572 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ECT2Q9H8V3 914 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 PLK2Q9NYY3 685 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ASB3Q9Y575 518 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 TCRBV9S1A1TA0A576 114 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 PPP1R12AO14974 1030 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ZBTB24O43167 697 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 GREM1O60565 184 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 RPSAP08865 295 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 PTPN3P26045 913 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 OR1E1P30953 314 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ACVRL1P37023 503 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 SLC11A2P49281 568 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 NCALDP61601 193 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 SPARCL1Q14515 664 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 HHATQ5VTY9 493 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 KIRREL3Q8IZU9 778 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 RTP4Q96DX8 246 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 MAGEB18Q96M61 343 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 PITPNM3Q9BZ71 974 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 SENP1Q9P0U3 644 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ZNF212Q9UDV6 495 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 MYO18AQ92614 2054 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 GBF1Q92538 1859 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 IGLV3-10A0A075B6K4 115 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 TTC24A2A3L6 582 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 F5H5T6 163 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 MAFKO60675 156 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 INHBAP08476 426 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 PSMB4P28070 264 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 SERPINB6P35237 376 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 PPIDQ08752 370 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 GPR158Q5T848 1215 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 PDZD4Q76G19 769 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 BZW1Q7L1Q6 419 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ZSCAN18Q8TBC5 510 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 CFAP97Q9P2B7 532 aa12.92□□□□□ -0.34
CDK5RAP3-217ENST00000580287 ZC3H7BQ9UGR2 993 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms