RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 DYRK4Q9NR20 520 aa19.89■□□□□ 0.77
SS18-209ENST00000578595 UVRAGQ9P2Y5 699 aa19.89■□□□□ 0.77
SS18-209ENST00000578595 PILRBQ9UKJ0 227 aa19.89■□□□□ 0.77
SS18-209ENST00000578595 NENFQ9UMX5 172 aa19.89■□□□□ 0.77
SS18-209ENST00000578595 LRRC72A6NJI9 287 aa19.88■□□□□ 0.77
SS18-209ENST00000578595 PLK4O00444 970 aa19.88■□□□□ 0.77
SS18-209ENST00000578595 MCF2LO15068 1137 aa19.88■□□□□ 0.77
SS18-209ENST00000578595 ALOX15BO15296 676 aa19.88■□□□□ 0.77
SS18-209ENST00000578595 ZMPSTE24O75844 475 aa19.88■□□□□ 0.77
SS18-209ENST00000578595 TMEM253P0C7T8 217 aa19.88■□□□□ 0.77
SS18-209ENST00000578595 KCNA4P22459 653 aa19.88■□□□□ 0.77
SS18-209ENST00000578595 IL1R2P27930 398 aa19.88■□□□□ 0.77
SS18-209ENST00000578595 CHRNA3P32297 505 aa19.88■□□□□ 0.77
SS18-209ENST00000578595 SLC20A2Q08357 652 aa19.88■□□□□ 0.77
SS18-209ENST00000578595 HADHQ16836 314 aaKnown RBP19.88■□□□□ 0.77
SS18-209ENST00000578595 DUOXA1Q1HG43 343 aa19.88■□□□□ 0.77
SS18-209ENST00000578595 PARP15Q460N3 678 aa19.88■□□□□ 0.77
SS18-209ENST00000578595 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.88■□□□□ 0.77
SS18-209ENST00000578595 CYP4V2Q6ZWL3 525 aaPredicted RBP19.88■□□□□ 0.77
SS18-209ENST00000578595 PSTKQ8IV42 348 aaKnown RBP19.88■□□□□ 0.77
SS18-209ENST00000578595 ZCCHC9Q8N567 271 aaKnown RBP19.88■□□□□ 0.77
SS18-209ENST00000578595 AADATQ8N5Z0 425 aa19.88■□□□□ 0.77
SS18-209ENST00000578595 PCDH20Q8N6Y1 951 aaKnown RBP19.88■□□□□ 0.77
SS18-209ENST00000578595 NIPA2Q8N8Q9 360 aa19.88■□□□□ 0.77
SS18-209ENST00000578595 TC2NQ8N9U0 490 aa19.88■□□□□ 0.77
SS18-209ENST00000578595 CADM4Q8NFZ8 388 aa19.88■□□□□ 0.77
SS18-209ENST00000578595 NETO1Q8TDF5 533 aa19.88■□□□□ 0.77
SS18-209ENST00000578595 ACE2Q9BYF1 805 aaPredicted RBP19.88■□□□□ 0.77
SS18-209ENST00000578595 NEUROG2Q9H2A3 272 aa19.88■□□□□ 0.77
SS18-209ENST00000578595 ZDHHC6Q9H6R6 413 aa19.88■□□□□ 0.77
SS18-209ENST00000578595 SUSD2Q9UGT4 822 aa19.88■□□□□ 0.77
SS18-209ENST00000578595 EIF2B4Q9UI10 523 aaKnown RBP19.88■□□□□ 0.77
SS18-209ENST00000578595 TMEM131Q92545 1883 aa19.88■□□□□ 0.77
SS18-209ENST00000578595 KNL1Q8NG31 2342 aa19.87■□□□□ 0.77
SS18-209ENST00000578595 METTL12A8MUP2 240 aa19.87■□□□□ 0.77
SS18-209ENST00000578595 DFFAO00273 331 aa19.87■□□□□ 0.77
SS18-209ENST00000578595 RARAP10276 462 aa19.87■□□□□ 0.77
SS18-209ENST00000578595 ERCC2P18074 760 aa19.87■□□□□ 0.77
SS18-209ENST00000578595 MAPK8P45983 427 aa19.87■□□□□ 0.77
SS18-209ENST00000578595 METAP1P53582 386 aa19.87■□□□□ 0.77
SS18-209ENST00000578595 ATXN3P54252 364 aaPredicted RBP19.87■□□□□ 0.77
SS18-209ENST00000578595 YBEYP58557 167 aaPredicted RBP19.87■□□□□ 0.77
SS18-209ENST00000578595 MESDQ14696 234 aa19.87■□□□□ 0.77
SS18-209ENST00000578595 BOLA3Q53S33 107 aa19.87■□□□□ 0.77
SS18-209ENST00000578595 CHST14Q8NCH0 376 aa19.87■□□□□ 0.77
SS18-209ENST00000578595 OR2A12Q8NGT7 310 aa19.87■□□□□ 0.77
SS18-209ENST00000578595 RMDN1Q96DB5 314 aa19.87■□□□□ 0.77
SS18-209ENST00000578595 GTPBP2Q9BX10 602 aaKnown RBP19.87■□□□□ 0.77
SS18-209ENST00000578595 CEP44Q9C0F1 390 aa19.87■□□□□ 0.77
SS18-209ENST00000578595 NOL6Q9H6R4 1146 aaKnown RBP19.87■□□□□ 0.77
SS18-209ENST00000578595 OSGEPQ9NPF4 335 aa19.87■□□□□ 0.77
SS18-209ENST00000578595 RXFP3Q9NSD7 469 aa19.87■□□□□ 0.77
SS18-209ENST00000578595 IL36AQ9UHA7 158 aa19.87■□□□□ 0.77
SS18-209ENST00000578595 SARDHQ9UL12 918 aa19.87■□□□□ 0.77
SS18-209ENST00000578595 FZD4Q9ULV1 537 aa19.87■□□□□ 0.77
SS18-209ENST00000578595 TRPM6Q9BX84 2022 aa19.86■□□□□ 0.77
SS18-209ENST00000578595 CNOT1A5YKK6 2376 aaKnown RBP19.86■□□□□ 0.77
SS18-209ENST00000578595 LNP1A1A4G5 178 aa19.86■□□□□ 0.77
SS18-209ENST00000578595 ZSCAN5CA6NGD5 496 aaPredicted RBP19.86■□□□□ 0.77
SS18-209ENST00000578595 ARHGAP42A6NI28 874 aa19.86■□□□□ 0.77
SS18-209ENST00000578595 WASH4PA8MWX3 477 aa19.86■□□□□ 0.77
SS18-209ENST00000578595 KDELR3O43731 214 aa19.86■□□□□ 0.77
SS18-209ENST00000578595 PRNPP04156 253 aa19.86■□□□□ 0.77
SS18-209ENST00000578595 HOXD12P35452 270 aa19.86■□□□□ 0.77
SS18-209ENST00000578595 CCNHP51946 323 aaPredicted RBP19.86■□□□□ 0.77
SS18-209ENST00000578595 IRX4P78413 519 aa19.86■□□□□ 0.77
SS18-209ENST00000578595 TXNRD3NBQ6F5E7 133 aa19.86■□□□□ 0.77
SS18-209ENST00000578595 NCEH1Q6PIU2 408 aa19.86■□□□□ 0.77
SS18-209ENST00000578595 DPY19L3Q6ZPD9 716 aa19.86■□□□□ 0.77
SS18-209ENST00000578595 NETO2Q8NC67 525 aa19.86■□□□□ 0.77
SS18-209ENST00000578595 OR6K2Q8NGY2 324 aa19.86■□□□□ 0.77
SS18-209ENST00000578595 CEP76Q8TAP6 659 aa19.86■□□□□ 0.77
SS18-209ENST00000578595 FSCN3Q9NQT6 498 aa19.86■□□□□ 0.77
SS18-209ENST00000578595 KLHL11Q9NVR0 708 aa19.86■□□□□ 0.77
SS18-209ENST00000578595 CWC15Q9P013 229 aaKnown RBP19.86■□□□□ 0.77
SS18-209ENST00000578595 ASCC3Q8N3C0 2202 aaKnown RBP19.86■□□□□ 0.77
SS18-209ENST00000578595 TBC1D3DA0A087WVF3 549 aa19.85■□□□□ 0.77
SS18-209ENST00000578595 TBC1D3IA0A087WXS9 549 aa19.85■□□□□ 0.77
SS18-209ENST00000578595 TBC1D3EA0A087X179 549 aa19.85■□□□□ 0.77
SS18-209ENST00000578595 TBC1D3KA0A087X1G2 549 aa19.85■□□□□ 0.77
SS18-209ENST00000578595 TBC1D3FA6NER0 549 aaPredicted RBP19.85■□□□□ 0.77
SS18-209ENST00000578595 TBC1D3LB9A6J9 549 aa19.85■□□□□ 0.77
SS18-209ENST00000578595 TMCC1O94876 653 aa19.85■□□□□ 0.77
SS18-209ENST00000578595 PROSCO94903 275 aa19.85■□□□□ 0.77
SS18-209ENST00000578595 CTSLP07711 333 aa19.85■□□□□ 0.77
SS18-209ENST00000578595 TBC1D3HP0C7X1 549 aa19.85■□□□□ 0.77
SS18-209ENST00000578595 SDHBP21912 280 aa19.85■□□□□ 0.77
SS18-209ENST00000578595 ZNF135P52742 658 aaPredicted RBP19.85■□□□□ 0.77
SS18-209ENST00000578595 NDST2P52849 883 aa19.85■□□□□ 0.77
SS18-209ENST00000578595 CDH6P55285 790 aa19.85■□□□□ 0.77
SS18-209ENST00000578595 RHOAP61586 193 aa19.85■□□□□ 0.77
SS18-209ENST00000578595 SNRPD1P62314 119 aaKnown RBP19.85■□□□□ 0.77
SS18-209ENST00000578595 SLC25A11Q02978 314 aaKnown RBP19.85■□□□□ 0.77
SS18-209ENST00000578595 CNTN1Q12860 1018 aa19.85■□□□□ 0.77
SS18-209ENST00000578595 DPYSL2Q16555 572 aa19.85■□□□□ 0.77
SS18-209ENST00000578595 CARD16Q5EG05 197 aa19.85■□□□□ 0.77
SS18-209ENST00000578595 ARSIQ5FYB1 569 aa19.85■□□□□ 0.77
SS18-209ENST00000578595 KIAA0895LQ68EN5 471 aa19.85■□□□□ 0.77
SS18-209ENST00000578595 TBC1D3GQ6DHY5 549 aa19.85■□□□□ 0.77
SS18-209ENST00000578595 TBC1D3CQ6IPX1 549 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms