RNA–Protein interactions for RNA: ENST00000578561.1

ERVFRD-3-201, Transcript of endogenous retrovirus group FRD member 3, humanhuman

BASIC

Gene ERVFRD-3, Length 1,617 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFRD-3-201ENST00000578561 CCNJLQ8IV13 435 aa5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 SUGP1Q8IWZ8 645 aaKnown RBP5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 THEM5Q8N1Q8 247 aa5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 KIF2BQ8N4N8 673 aa5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 GBP7Q8N8V2 638 aaPredicted RBP5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 STKLD1Q8NE28 680 aa5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ZNF398Q8TD17 642 aa5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ZDHHC1Q8WTX9 485 aa5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ISL2Q96A47 359 aa5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 SLC7A6OSQ96CW6 309 aaPredicted RBP5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ERP27Q96DN0 273 aa5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 CELF6Q96J87 481 aaKnown RBP5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 MCMBPQ9BTE3 642 aa5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 MECRQ9BV79 373 aa5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ZCWPW1Q9H0M4 648 aa5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 TSPAN10Q9H1Z9 355 aaPredicted RBP5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 GBA3Q9H227 469 aa5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 SMOC2Q9H3U7 446 aa5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 NPHS2Q9NP85 383 aa5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ABCC13Q9NSE7 274 aa5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 PCMTD2Q9NV79 361 aa5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 NDFIP2Q9NV92 336 aa5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 TBC1D13Q9NVG8 400 aa5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 IL1RAPL1Q9NZN1 696 aa5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 KLHL8Q9P2G9 620 aaPredicted RBP5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 DNAJB4Q9UDY4 337 aa5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 SFMBT1Q9UHJ3 866 aa5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 DNAH12Q6ZR08 3092 aa5.4□□□□□ -1.55
ERVFRD-3-201ENST00000578561 HTTP42858 3142 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 A0A1W2PQ45 241 aaPredicted RBP5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 A0A1W2PQH9 124 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 A0A1W2PQY0 241 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 TPP1O14773 563 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 MTSS1O43312 755 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 MSI1O43347 362 aaKnown RBP5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 MAFKO60675 156 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 SNNO75324 88 aaPredicted RBP5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ZNF189O75820 626 aaPredicted RBP5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 VNN2O95498 520 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 BPGMP07738 259 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 F7P08709 466 aaPredicted RBP5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 KRT16P08779 473 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ERVK-10P10266 1014 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 CNTFP26441 200 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 CYP2C18P33260 490 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 GPR15P49685 360 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 CSRP3P50461 194 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 TSPY1Q01534 308 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 NRG1Q02297 640 aaPredicted RBP5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 YWHAHQ04917 246 aaPredicted RBP5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ZNF33AQ06730 810 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 BST1Q10588 318 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 NAB1Q13506 487 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 PDE1CQ14123 709 aaPredicted RBP5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 PPP2R5DQ14738 602 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 TEAD4Q15561 434 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 MAPRE1Q15691 268 aaKnown RBP5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 SMAD1Q15797 465 aaKnown RBP5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 SEPT7Q16181 437 aaKnown RBP5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 TCTN1Q2MV58 587 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ANKRD20A4Q4UJ75 823 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 SLC39A12Q504Y0 691 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 NOMO2Q5JPE7 1267 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 SPANXN3Q5MJ09 141 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 SPDYAQ5MJ70 313 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 BRMS1LQ5PSV4 323 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 SDHAF4Q5VUM1 108 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 DENND5AQ6IQ26 1287 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 C16orf46Q6P387 395 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 CASC4Q6P4E1 433 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ZNF449Q6P9G9 518 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 GLB1LQ6UWU2 654 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 OTOP3Q7RTS5 596 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 RNF180Q86T96 592 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 SPATA2LQ8IUW3 424 aaPredicted RBP5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ZNF683Q8IZ20 524 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 NDUFAF2Q8N183 169 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 TTC9BQ8N6N2 239 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 OR6Y1Q8NGX8 325 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 CD99L2Q8TCZ2 262 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ACMSDQ8TDX5 336 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 CCDC97Q96F63 343 aaPredicted RBP5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 CERS2Q96G23 380 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 SLC39A13Q96H72 371 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 PRR11Q96HE9 360 aaPredicted RBP5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 C7orf26Q96N11 449 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 AGAP3Q96P47 875 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 HAPLN3Q96S86 360 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 VAT1Q99536 393 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 IL12RB2Q99665 862 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 NAT9Q9BTE0 207 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 TSSK1BQ9BXA7 367 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 SLC13A1Q9BZW2 595 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 SLC39A8Q9C0K1 460 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 C20orf27Q9GZN8 174 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 SIK2Q9H0K1 926 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 LRMDAQ9H2I8 198 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 NOL6Q9H6R4 1146 aaKnown RBP5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 IL37Q9NZH6 218 aa5.39□□□□□ -1.55
ERVFRD-3-201ENST00000578561 DCTN4Q9UJW0 460 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms