RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501		A0A1W2PP55	124 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	MEI4	A8MW99	385 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	C10orf142	B7Z368	130 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	C1QTNF3-AMACR	E9PGA6	284 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501		K7ERQ8	282 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	SLC7A4	O43246	635 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	SMAD6	O43541	496 aa	Known RBP	13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	CREB3	O43889	395 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	PRPSAP2	O60256	369 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	MFAP3L	O75121	409 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	LRCH4	O75427	683 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ZNF821	O75541	412 aa	Predicted RBP	13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	IL1B	P01584	269 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	GLDC	P23378	1020 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ACVRL1	P37023	503 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	EIF4A3	P38919	411 aa	Known RBP	13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	PSMD8	P48556	350 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	POLD3	Q15054	466 aa	Predicted RBP	13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	LINGO4	Q6UY18	593 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	PLPP6	Q8IY26	295 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	UMODL1-AS1	Q8N2C9	162 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	HDDC3	Q8N4P3	179 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	AADAT	Q8N5Z0	425 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	PCDH20	Q8N6Y1	951 aa	Known RBP	13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	TMIE	Q8NEW7	156 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	C1orf216	Q8TAB5	229 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	GANC	Q8TET4	914 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	PEBP4	Q96S96	227 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	NEUROG2	Q9H2A3	272 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	KDM4C	Q9H3R0	1056 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	C6orf106	Q9H6K1	298 aa	Predicted RBP	13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ABHD10	Q9NUJ1	306 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	SERGEF	Q9UGK8	458 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	IP6K2	Q9UHH9	426 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	TPX2	Q9ULW0	747 aa	Known RBP	13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	NEUROG3	Q9Y4Z2	214 aa		13.93	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ATXN2	Q99700	1313 aa	Known RBP	13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ZFYVE26	Q68DK2	2539 aa		13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501		A0A1B0GTW7	788 aa		13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	LRRC72	A6NJI9	287 aa		13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	TAF4	O00268	1085 aa		13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	CDX4	O14627	284 aa	Predicted RBP	13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	KDELR3	O43731	214 aa		13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	RNASEH2A	O75792	299 aa	Known RBP	13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	CD160	O95971	181 aa		13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	CFI	P05156	583 aa		13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	MAOB	P27338	520 aa		13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	DRD3	P35462	400 aa		13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	HCAR3	P49019	387 aa		13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	GALC	P54803	685 aa		13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	TPI1	P60174	286 aa		13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	GFPT1	Q06210	699 aa	Predicted RBP	13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	TBX2	Q13207	712 aa	Predicted RBP	13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	PARP15	Q460N3	678 aa		13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	BOLA3	Q53S33	107 aa		13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	C22orf39	Q6P5X5	142 aa		13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	CNGA4	Q8IV77	575 aa		13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	OR2T34	Q8NGX1	318 aa		13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	PIP4K2C	Q8TBX8	421 aa		13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	SNRNP25	Q9BV90	132 aa	Known RBP	13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	NUP85	Q9BW27	656 aa		13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	SLC32A1	Q9H598	525 aa		13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	DHX35	Q9H5Z1	703 aa	Known RBP	13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	NOL6	Q9H6R4	1146 aa	Known RBP	13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	OSGEP	Q9NPF4	335 aa		13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	PCSK1N	Q9UHG2	260 aa		13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	SARDH	Q9UL12	918 aa		13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	MSRB2	Q9Y3D2	182 aa		13.92	□□□□□ -0.18
CSNK1D-208	ENST00000578501	CHD5	Q8TDI0	1954 aa		13.91	□□□□□ -0.18
CSNK1D-208	ENST00000578501	MYO1F	O00160	1098 aa		13.91	□□□□□ -0.18
CSNK1D-208	ENST00000578501	BCAT2	O15382	392 aa	Predicted RBP	13.91	□□□□□ -0.18
CSNK1D-208	ENST00000578501	PRNP	P04156	253 aa		13.91	□□□□□ -0.18
CSNK1D-208	ENST00000578501	SYP	P08247	313 aa		13.91	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ENG	P17813	658 aa		13.91	□□□□□ -0.18
CSNK1D-208	ENST00000578501	CD27	P26842	260 aa		13.91	□□□□□ -0.18
CSNK1D-208	ENST00000578501	CHRNA3	P32297	505 aa		13.91	□□□□□ -0.18
CSNK1D-208	ENST00000578501	RECQL	P46063	649 aa	Predicted RBP	13.91	□□□□□ -0.18
CSNK1D-208	ENST00000578501	NDST2	P52849	883 aa		13.91	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ADPRH	P54922	357 aa		13.91	□□□□□ -0.18
CSNK1D-208	ENST00000578501	CCDC15	Q0P6D6	951 aa		13.91	□□□□□ -0.18
CSNK1D-208	ENST00000578501	CA9	Q16790	459 aa		13.91	□□□□□ -0.18
CSNK1D-208	ENST00000578501	KIAA0895L	Q68EN5	471 aa		13.91	□□□□□ -0.18
CSNK1D-208	ENST00000578501	CASKIN2	Q8WXE0	1202 aa		13.91	□□□□□ -0.18
CSNK1D-208	ENST00000578501	BIRC7	Q96CA5	298 aa		13.91	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ARHGEF26	Q96DR7	871 aa		13.91	□□□□□ -0.18
CSNK1D-208	ENST00000578501	TRIM5	Q9C035	493 aa		13.91	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ZDHHC5	Q9C0B5	715 aa		13.91	□□□□□ -0.18
CSNK1D-208	ENST00000578501	DEF6	Q9H4E7	631 aa		13.91	□□□□□ -0.18
CSNK1D-208	ENST00000578501	GPATCH2L	Q9NWQ4	482 aa		13.91	□□□□□ -0.18
CSNK1D-208	ENST00000578501	UVRAG	Q9P2Y5	699 aa		13.91	□□□□□ -0.18
CSNK1D-208	ENST00000578501	LCMT1	Q9UIC8	334 aa		13.91	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ANAPC7	Q9UJX3	599 aa		13.91	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.91	□□□□□ -0.18
CSNK1D-208	ENST00000578501	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	EEF2K	O00418	725 aa	Known RBP	13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ARHGAP33	O14559	1287 aa		13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	AKR1B10	O60218	316 aa		13.9	□□□□□ -0.18

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