RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 SAR1BQ9Y6B6 198 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 CUL9Q8IWT3 2517 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 EDDM13A0A1B0GTR0 161 aa12.93□□□□□ -0.34
MKS1-206ENST00000577824 TARSL2A2RTX5 802 aaKnown RBP12.93□□□□□ -0.34
MKS1-206ENST00000577824 PRR33A8MZF0 331 aa12.93□□□□□ -0.34
MKS1-206ENST00000577824 K7ERQ8 282 aa12.93□□□□□ -0.34
MKS1-206ENST00000577824 SGK1O00141 431 aa12.93□□□□□ -0.34
MKS1-206ENST00000577824 ALOX15BO15296 676 aa12.93□□□□□ -0.34
MKS1-206ENST00000577824 SMAD6O43541 496 aaKnown RBP12.93□□□□□ -0.34
MKS1-206ENST00000577824 PI15O43692 258 aa12.93□□□□□ -0.34
MKS1-206ENST00000577824 CEP104O60308 925 aa12.93□□□□□ -0.34
MKS1-206ENST00000577824 KLF8O95600 359 aaPredicted RBP12.93□□□□□ -0.34
MKS1-206ENST00000577824 DCNP07585 359 aaKnown RBP12.93□□□□□ -0.34
MKS1-206ENST00000577824 NNMTP40261 264 aa12.93□□□□□ -0.34
MKS1-206ENST00000577824 NUMBP49757 651 aa12.93□□□□□ -0.34
MKS1-206ENST00000577824 IFI35P80217 286 aaPredicted RBP12.93□□□□□ -0.34
MKS1-206ENST00000577824 CAMK2GQ13555 558 aaPredicted RBP12.93□□□□□ -0.34
MKS1-206ENST00000577824 LBRQ14739 615 aaKnown RBP12.93□□□□□ -0.34
MKS1-206ENST00000577824 C2orf27AQ580R0 203 aa12.93□□□□□ -0.34
MKS1-206ENST00000577824 SLC45A4Q5BKX6 768 aa12.93□□□□□ -0.34
MKS1-206ENST00000577824 EOGTQ5NDL2 527 aa12.93□□□□□ -0.34
MKS1-206ENST00000577824 SYT10Q6XYQ8 523 aa12.93□□□□□ -0.34
MKS1-206ENST00000577824 CCDC13Q8IYE1 715 aa12.93□□□□□ -0.34
MKS1-206ENST00000577824 ATP11CQ8NB49 1132 aa12.93□□□□□ -0.34
MKS1-206ENST00000577824 TXNDC5Q8NBS9 432 aaKnown RBP12.93□□□□□ -0.34
MKS1-206ENST00000577824 TFB1MQ8WVM0 346 aaKnown RBP12.93□□□□□ -0.34
MKS1-206ENST00000577824 NKD2Q969F2 451 aaPredicted RBP12.93□□□□□ -0.34
MKS1-206ENST00000577824 VOPP1Q96AW1 172 aa12.93□□□□□ -0.34
MKS1-206ENST00000577824 HAUS1Q96CS2 278 aa12.93□□□□□ -0.34
MKS1-206ENST00000577824 PSKH2Q96QS6 385 aa12.93□□□□□ -0.34
MKS1-206ENST00000577824 NAP1L3Q99457 506 aaPredicted RBP12.93□□□□□ -0.34
MKS1-206ENST00000577824 LGMNQ99538 433 aa12.93□□□□□ -0.34
MKS1-206ENST00000577824 IL12RB2Q99665 862 aa12.93□□□□□ -0.34
MKS1-206ENST00000577824 MGME1Q9BQP7 344 aa12.93□□□□□ -0.34
MKS1-206ENST00000577824 PRMT8Q9NR22 394 aaPredicted RBP12.93□□□□□ -0.34
MKS1-206ENST00000577824 LHX3Q9UBR4 397 aa12.93□□□□□ -0.34
MKS1-206ENST00000577824 SLCO3A1Q9UIG8 710 aa12.93□□□□□ -0.34
MKS1-206ENST00000577824 R3HDM2Q9Y2K5 976 aaKnown RBP12.93□□□□□ -0.34
MKS1-206ENST00000577824 ACTL7AQ9Y615 435 aa12.93□□□□□ -0.34
MKS1-206ENST00000577824 BCLAF3A2AJT9 711 aaKnown RBP12.92□□□□□ -0.34
MKS1-206ENST00000577824 TTC34A8MYJ7 566 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 WASH3PC4AMC7 463 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 STK25O00506 426 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 MCF2LO15068 1137 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 MTSS1O43312 755 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 LIASO43766 372 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 GSRP00390 522 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 HOXB2P14652 356 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 VAV1P15498 845 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 CASQ1P31415 396 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 HSPA9P38646 679 aaKnown RBP12.92□□□□□ -0.34
MKS1-206ENST00000577824 CSNK1DP48730 415 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 MTAPQ13126 283 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 ELAVL3Q14576 367 aaKnown RBP12.92□□□□□ -0.34
MKS1-206ENST00000577824 OASLQ15646 514 aaKnown RBP12.92□□□□□ -0.34
MKS1-206ENST00000577824 DLG2Q15700 870 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 CRY1Q16526 586 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 C9orf64Q5T6V5 341 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 CCDC181Q5TID7 509 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 ZNF354CQ86Y25 554 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 CREG2Q8IUH2 290 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 CDKL3Q8IVW4 592 aaPredicted RBP12.92□□□□□ -0.34
MKS1-206ENST00000577824 CCDC33Q8N5R6 958 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 TMEM105Q8N8V8 129 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 C12orf50Q8NA57 414 aaPredicted RBP12.92□□□□□ -0.34
MKS1-206ENST00000577824 PTPRN2Q92932 1015 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 PBXIP1Q96AQ6 731 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 RTP4Q96DX8 246 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 ZDHHC4Q9NPG8 344 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 RNF14Q9UBS8 474 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 SEPT3Q9UH03 358 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 SUN2Q9UH99 717 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 SLC8A2Q9UPR5 921 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 FCF1Q9Y324 198 aaKnown RBP12.92□□□□□ -0.34
MKS1-206ENST00000577824 DMDP11532 3685 aa12.92□□□□□ -0.34
MKS1-206ENST00000577824 NUP205Q92621 2012 aa12.91□□□□□ -0.34
MKS1-206ENST00000577824 EPHX1P07099 455 aa12.91□□□□□ -0.34
MKS1-206ENST00000577824 RBP3P10745 1247 aa12.91□□□□□ -0.34
MKS1-206ENST00000577824 CCNB1P14635 433 aa12.91□□□□□ -0.34
MKS1-206ENST00000577824 CR2P20023 1033 aa12.91□□□□□ -0.34
MKS1-206ENST00000577824 COL9A1P20849 921 aa12.91□□□□□ -0.34
MKS1-206ENST00000577824 HOXA6P31267 233 aa12.91□□□□□ -0.34
MKS1-206ENST00000577824 DEKP35659 375 aaKnown RBP12.91□□□□□ -0.34
MKS1-206ENST00000577824 RENBPP51606 427 aa12.91□□□□□ -0.34
MKS1-206ENST00000577824 CCR3P51677 355 aa12.91□□□□□ -0.34
MKS1-206ENST00000577824 DGKEP52429 567 aa12.91□□□□□ -0.34
MKS1-206ENST00000577824 NUBP1P53384 320 aa12.91□□□□□ -0.34
MKS1-206ENST00000577824 COPAP53621 1224 aa12.91□□□□□ -0.34
MKS1-206ENST00000577824 EIF3EP60228 445 aaKnown RBP12.91□□□□□ -0.34
MKS1-206ENST00000577824 NSUN2Q08J23 767 aaKnown RBP eCLIP12.91□□□□□ -0.34
MKS1-206ENST00000577824 SLC10A7Q0GE19 358 aa12.91□□□□□ -0.34
MKS1-206ENST00000577824 ZBTB17Q13105 803 aa12.91□□□□□ -0.34
MKS1-206ENST00000577824 CYTH1Q15438 398 aa12.91□□□□□ -0.34
MKS1-206ENST00000577824 CCNG2Q16589 344 aa12.91□□□□□ -0.34
MKS1-206ENST00000577824 CYP1B1Q16678 543 aa12.91□□□□□ -0.34
MKS1-206ENST00000577824 LONRF2Q1L5Z9 754 aa12.91□□□□□ -0.34
MKS1-206ENST00000577824 RALGPS1Q5JS13 557 aa12.91□□□□□ -0.34
MKS1-206ENST00000577824 MARC1Q5VT66 337 aa12.91□□□□□ -0.34
MKS1-206ENST00000577824 SDE2Q6IQ49 451 aa12.91□□□□□ -0.34
MKS1-206ENST00000577824 TMEM92Q6UXU6 159 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms