RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 DDX43Q9NXZ2 648 aaKnown RBP4.48□□□□□ -1.69
CDH8-205ENST00000577730 MAT2BQ9NZL9 334 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 ANKRD6Q9Y2G4 727 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 ZNF609O15014 1411 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 RBAK-RBAKDNI3L0D1 243 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 ALOX15BO15296 676 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 GMDSO60547 372 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 CCNYL3P0C7X3 344 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 ZNF182P17025 639 aaPredicted RBP4.48□□□□□ -1.69
CDH8-205ENST00000577730 KCNA5P22460 613 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 GLDCP23378 1020 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 ELP6Q0PNE2 266 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 CCNIQ14094 377 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 GPATCH4Q5T3I0 446 aaKnown RBP4.48□□□□□ -1.69
CDH8-205ENST00000577730 FAM20CQ8IXL6 584 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 DEPDC4Q8N2C3 294 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 SLC15A4Q8N697 577 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 MCOLN3Q8TDD5 553 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 FRMD6Q96NE9 622 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 APOL2Q9BQE5 337 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 GBA3Q9H227 469 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 KBTBD4Q9NVX7 518 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 ZNF451Q9Y4E5 1061 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 PCDHGA11Q9Y5H2 935 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 AATKQ6ZMQ8 1374 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 C3orf70A6NLC5 250 aaPredicted RBP4.48□□□□□ -1.69
CDH8-205ENST00000577730 CHURC1-FNTBB4DL54 471 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 SUPT3HB4E1H0 165 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 PTTG1O95997 202 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 HLA-DRAP01903 254 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 BPGMP07738 259 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 PRKCIP41743 596 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 PSMD4P55036 377 aaKnown RBP4.48□□□□□ -1.69
CDH8-205ENST00000577730 GIT2Q14161 759 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 FGL2Q14314 439 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 GALNT3Q14435 633 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 GRM4Q14833 912 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 KIZQ2M2Z5 673 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 ZNF425Q6IV72 752 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 KRT77Q7Z794 578 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 OFCC1Q8IZS5 231 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 DNAJA4Q8WW22 397 aaPredicted RBP4.48□□□□□ -1.69
CDH8-205ENST00000577730 SLC9A6Q92581 669 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 LPGAT1Q92604 370 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 DUSP9Q99956 384 aaKnown RBP4.48□□□□□ -1.69
CDH8-205ENST00000577730 IDI2Q9BXS1 227 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 PDGFCQ9NRA1 345 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 OLA1Q9NTK5 396 aaKnown RBP4.48□□□□□ -1.69
CDH8-205ENST00000577730 CCDC167Q9P0B6 97 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 AASSQ9UDR5 926 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 PCDHB2Q9Y5E7 798 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 FAM149AA5PLN7 773 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 ATP6V1G2-DDX39BF2Z307 99 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 MAGEB2O15479 319 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 CYP7B1O75881 506 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 OR2B3O76000 313 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 PGK1P00558 417 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 C8BP07358 591 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 ATF3P18847 181 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 BMP6P22004 513 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 ALDH4A1P30038 563 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 PPP3CCP48454 512 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 FSTL1Q12841 308 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 TSTA3Q13630 321 aaPredicted RBP4.48□□□□□ -1.69
CDH8-205ENST00000577730 GNA13Q14344 377 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 ZNF404Q494X3 552 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 RBM48Q5RL73 367 aaKnown RBP4.48□□□□□ -1.69
CDH8-205ENST00000577730 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.48□□□□□ -1.69
CDH8-205ENST00000577730 DENND6BQ8NEG7 585 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 EEF1AKMT1Q8WVE0 214 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 FCGR1BQ92637 280 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 MUC13Q9H3R2 512 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 IFT22Q9H7X7 185 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 MCUBQ9NWR8 336 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 BARHL2Q9NY43 387 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 IFT80Q9P2H3 777 aaPredicted RBP4.48□□□□□ -1.69
CDH8-205ENST00000577730 IKZF3Q9UKT9 509 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 UBQLN1Q9UMX0 589 aaKnown RBP4.48□□□□□ -1.69
CDH8-205ENST00000577730 BBIP1A8MTZ0 92 aa4.47□□□□□ -1.69
CDH8-205ENST00000577730 RNF225M0QZC1 329 aaPredicted RBP4.47□□□□□ -1.69
CDH8-205ENST00000577730 ZNF701M0R085 212 aaPredicted RBP4.47□□□□□ -1.69
CDH8-205ENST00000577730 M0R233 179 aa4.47□□□□□ -1.69
CDH8-205ENST00000577730 MED24O75448 989 aa4.47□□□□□ -1.69
CDH8-205ENST00000577730 PRAMEF1O95521 474 aa4.47□□□□□ -1.69
CDH8-205ENST00000577730 CYP3A5P20815 502 aa4.47□□□□□ -1.69
CDH8-205ENST00000577730 PKLRP30613 574 aa4.47□□□□□ -1.69
CDH8-205ENST00000577730 GLRBP48167 497 aa4.47□□□□□ -1.69
CDH8-205ENST00000577730 TMEM62Q0P6H9 643 aa4.47□□□□□ -1.69
CDH8-205ENST00000577730 CAMK1Q14012 370 aa4.47□□□□□ -1.69
CDH8-205ENST00000577730 TTLL12Q14166 644 aaPredicted RBP4.47□□□□□ -1.69
CDH8-205ENST00000577730 DSC3Q14574 896 aa4.47□□□□□ -1.69
CDH8-205ENST00000577730 ZNF667Q5HYK9 610 aa4.47□□□□□ -1.69
CDH8-205ENST00000577730 FAM102AQ5T9C2 384 aaPredicted RBP4.47□□□□□ -1.69
CDH8-205ENST00000577730 GRTP1Q5TC63 336 aa4.47□□□□□ -1.69
CDH8-205ENST00000577730 SLC22A9Q8IVM8 553 aa4.47□□□□□ -1.69
CDH8-205ENST00000577730 SLITRK4Q8IW52 837 aa4.47□□□□□ -1.69
CDH8-205ENST00000577730 CRELD1Q96HD1 420 aa4.47□□□□□ -1.69
CDH8-205ENST00000577730 CHCHD6Q9BRQ6 235 aa4.47□□□□□ -1.69
CDH8-205ENST00000577730 MSTO1Q9BUK6 570 aa4.47□□□□□ -1.69
CDH8-205ENST00000577730 KLHL1Q9NR64 748 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms