RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 PCSK5Q92824 1860 aa2.72□□□□□ -1.97
COPS3-213ENST00000577210 RNFT2Q96EX2 444 aa2.72□□□□□ -1.97
COPS3-213ENST00000577210 HMCESQ96FZ2 354 aa2.72□□□□□ -1.97
COPS3-213ENST00000577210 MPP4Q96JB8 637 aa2.72□□□□□ -1.97
COPS3-213ENST00000577210 SCNM1Q9BWG6 230 aa2.72□□□□□ -1.97
COPS3-213ENST00000577210 QTRT1Q9BXR0 403 aaKnown RBP2.72□□□□□ -1.97
COPS3-213ENST00000577210 HIPK3Q9H422 1215 aa2.72□□□□□ -1.97
COPS3-213ENST00000577210 EPHX3Q9H6B9 360 aa2.72□□□□□ -1.97
COPS3-213ENST00000577210 THSD1Q9NS62 852 aa2.72□□□□□ -1.97
COPS3-213ENST00000577210 POT1Q9NUX5 634 aa2.72□□□□□ -1.97
COPS3-213ENST00000577210 IRAK4Q9NWZ3 460 aa2.72□□□□□ -1.97
COPS3-213ENST00000577210 TRNAU1APQ9NX07 287 aaKnown RBP2.72□□□□□ -1.97
COPS3-213ENST00000577210 ZDHHC7Q9NXF8 308 aa2.72□□□□□ -1.97
COPS3-213ENST00000577210 IL1RAPL1Q9NZN1 696 aa2.72□□□□□ -1.97
COPS3-213ENST00000577210 MPP6Q9NZW5 540 aa2.72□□□□□ -1.97
COPS3-213ENST00000577210 UPB1Q9UBR1 384 aa2.72□□□□□ -1.97
COPS3-213ENST00000577210 UTS2RQ9UKP6 389 aa2.72□□□□□ -1.97
COPS3-213ENST00000577210 ARHGAP26Q9UNA1 814 aa2.72□□□□□ -1.97
COPS3-213ENST00000577210 RCE1Q9Y256 329 aa2.72□□□□□ -1.97
COPS3-213ENST00000577210 BTBD3Q9Y2F9 522 aa2.72□□□□□ -1.97
COPS3-213ENST00000577210 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.72□□□□□ -1.97
COPS3-213ENST00000577210 TCRBV7S3A2A0A539 114 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 CXorf65A6NEN9 183 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 FAM90A7PA6NKC0 464 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 A6NLC8 198 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 FAM90A22PA8MWA6 464 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 FAM90A12PA8MX19 464 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 FAM90A23PA8MXZ1 464 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 J3KRW8 73 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 EYA2O00167 538 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 SOCS2O14508 198 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 MDM4O15151 490 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 CCNDBP1O95273 360 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 CBX6O95503 412 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 DDAH2O95865 285 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 IFNA2P01563 188 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 HOXB5P09067 269 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 HSPA1AP0DMV8 641 aaKnown RBP2.71□□□□□ -1.98
COPS3-213ENST00000577210 HSPA1BP0DMV9 641 aaKnown RBP2.71□□□□□ -1.98
COPS3-213ENST00000577210 COX7A2P14406 83 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 AVPR2P30518 371 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 RASSF2P50749 326 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 NAP1L1P55209 391 aaKnown RBP2.71□□□□□ -1.98
COPS3-213ENST00000577210 EIF3BP55884 814 aaKnown RBP2.71□□□□□ -1.98
COPS3-213ENST00000577210 GAD2Q05329 585 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 PGM5Q15124 567 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 MAPRE1Q15691 268 aaKnown RBP2.71□□□□□ -1.98
COPS3-213ENST00000577210 INPP5JQ15735 1006 aaPredicted RBP2.71□□□□□ -1.98
COPS3-213ENST00000577210 ARL13AQ5H913 290 aaPredicted RBP2.71□□□□□ -1.98
COPS3-213ENST00000577210 ZNF766Q5HY98 468 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 ATG9BQ674R7 924 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 ZNF626Q68DY1 528 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 PDXDC1Q6P996 788 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 SHC4Q6S5L8 630 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 RSRC2Q7L4I2 434 aaKnown RBP2.71□□□□□ -1.98
COPS3-213ENST00000577210 PRSS45Q7RTY3 260 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 MAATS1Q7Z4T9 603 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 PATL1Q86TB9 770 aaKnown RBP2.71□□□□□ -1.98
COPS3-213ENST00000577210 MMP21Q8N119 569 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 NEK9Q8TD19 979 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 C2CD4CQ8TF44 421 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 ST8SIA4Q92187 359 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 HDAC2Q92769 488 aaKnown RBP2.71□□□□□ -1.98
COPS3-213ENST00000577210 RNF125Q96EQ8 232 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 APOPT1Q96IL0 206 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 NLRP4Q96MN2 994 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 MMTAG2Q9BU76 263 aaKnown RBP2.71□□□□□ -1.98
COPS3-213ENST00000577210 CTDSP1Q9GZU7 261 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 MROH8Q9H579 483 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 ACAD9Q9H845 621 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 PRKRIP1Q9H875 184 aaPredicted RBP2.71□□□□□ -1.98
COPS3-213ENST00000577210 ATP8A2Q9NTI2 1148 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 TAS2R10Q9NYW0 307 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 KCND2Q9NZV8 630 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 SEL1LQ9UBV2 794 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 SLC25A10Q9UBX3 287 aaPredicted RBP2.71□□□□□ -1.98
COPS3-213ENST00000577210 ICKQ9UPZ9 632 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 LAS1LQ9Y4W2 734 aaKnown RBP2.71□□□□□ -1.98
COPS3-213ENST00000577210 PCDHGB5Q9Y5G0 923 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 TNFRSF18Q9Y5U5 241 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 CYP46A1Q9Y6A2 500 aa2.71□□□□□ -1.98
COPS3-213ENST00000577210 COL11A2P13942 1736 aaPredicted RBP2.71□□□□□ -1.98
COPS3-213ENST00000577210 TRBV5-7A0A0A0MS05 114 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 DYTNA2CJ06 578 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 FAM157AC9JC47 383 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 EBAG9O00559 213 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 TNPO2O14787 897 aaKnown RBP2.7□□□□□ -1.98
COPS3-213ENST00000577210 PPEF2O14830 753 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 PER2O15055 1255 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 CEP104O60308 925 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 MOSPD3O75425 235 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 HNRNPA1P09651 372 aaKnown RBP eCLIP2.7□□□□□ -1.98
COPS3-213ENST00000577210 PEPDP12955 493 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 UNGP13051 313 aaPredicted RBP2.7□□□□□ -1.98
COPS3-213ENST00000577210 CD58P19256 250 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 BDNFP23560 247 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 CHMP24386 653 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 POU1F1P28069 291 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 CDC25AP30304 524 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 RFC1P35251 1148 aaPredicted RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms